Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J22
(975 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 33 2.1
K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich pro... 33 2.1
U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated pr... 32 2.8
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 32 2.8
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 32 2.8
BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein pr... 32 2.8
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 32 2.8
BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein. 32 2.8
BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein. 32 2.8
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 4.8
AK091683-1|BAC03720.1| 749|Homo sapiens protein ( Homo sapiens ... 31 4.8
AK056450-1|BAB71186.1| 568|Homo sapiens protein ( Homo sapiens ... 31 4.8
AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein. 31 4.8
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 4.8
L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiester... 31 6.4
BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2 (... 31 6.4
AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2 (... 31 6.4
AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2 (... 31 6.4
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 6.4
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 6.4
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 6.4
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 6.4
AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens ... 31 6.4
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 31 6.4
AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marke... 31 6.4
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 31 6.4
AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein. 31 6.4
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 6.4
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 31 6.4
Y13440-1|CAA73851.1| 582|Homo sapiens Rox protein. 31 8.4
X96401-1|CAA65265.1| 582|Homo sapiens ROX protein protein. 31 8.4
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 8.4
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 8.4
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 31 8.4
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 31 8.4
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 31 8.4
BC117563-1|AAI17564.1| 582|Homo sapiens MAX binding protein pro... 31 8.4
BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein. 31 8.4
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 8.4
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 8.4
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 31 8.4
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 8.4
AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein. 31 8.4
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich
protein protein.
Length = 236
Score = 32.7 bits (71), Expect = 2.1
Identities = 28/90 (31%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP GP P G PP R PPR PP
Sbjct: 77 PPPPPGKPQGPPPQGGNRPQGPPPP-----GKPQGPPPQGDKSRSPRSPPRKPQ--GPPP 129
Query: 446 XGGXXXXGCXPPP-XXAXPPXGGGCXPPXP 360
GG G PPP PP GG P P
Sbjct: 130 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 159
>K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich
protein precursor protein.
Length = 247
Score = 32.7 bits (71), Expect = 2.1
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP GP P GRPP + + PP P
Sbjct: 49 RPPPPPGKPQGPPPQGGNQSQGPPPPP---GKPEGRPP--QGGNQSQGPPPHPGKPERPP 103
Query: 449 PXGGXXXXGCXPPP--XXAXPPXGG--GCXPPXP 360
P GG G PPP PP GG PP P
Sbjct: 104 PQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPP 137
>U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated
protein protein.
Length = 872
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 811 PPPXXXHTPR-PXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P P PP P PP P GPPPP
Sbjct: 57 PPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFPMAHPPNLGPPPP 109
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 32.3 bits (70), Expect = 2.8
Identities = 29/95 (30%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP GP P GRPP + + PP P
Sbjct: 19 RPPPPPGKPQGPPPQGGNQSQGPPPPP---GKPEGRPP--QGGNQSQGPPPHPGKPERPP 73
Query: 449 PXGGXXXXGCXPPP--XXAXPPXGGG---CXPPXP 360
P GG G PPP PP GG PP P
Sbjct: 74 PQGGNQSQGTPPPPGKPEGRPPQGGNQSQGPPPHP 108
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 32.3 bits (70), Expect = 2.8
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -2
Query: 527 GRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPP-XXAXPPXGGGCXPPXP 360
G PP P+ PP PP GG G PPP PP GG P P
Sbjct: 4 GAPPQGGNKPQGPPSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 58
Score = 31.9 bits (69), Expect = 3.6
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -2
Query: 527 GRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPP-XXAXPPXGGGCXPPXP 360
G PP + R PP PP GG G PPP PP GG P P
Sbjct: 127 GPPPQGDNKSRSSRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 181
>BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein
protein.
Length = 799
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 811 PPPXXXHTPR-PXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P P PP P PP P GPPPP
Sbjct: 82 PPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFPMAHPPNLGPPPP 134
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 32.3 bits (70), Expect = 2.8
Identities = 29/95 (30%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP GP P GRPP + + PP P
Sbjct: 49 RPPPPPGKPQGPPPQGGNQSQGPPPPP---GKPEGRPP--QGGNQSQGPPPHPGKPERPP 103
Query: 449 PXGGXXXXGCXPPP--XXAXPPXGGG---CXPPXP 360
P GG G PPP PP GG PP P
Sbjct: 104 PQGGNQSQGTPPPPGKPEGRPPQGGNQSQGPPPHP 138
>BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein.
Length = 877
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 811 PPPXXXHTPR-PXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P P PP P PP P GPPPP
Sbjct: 80 PPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFPMAHPPNLGPPPP 132
>BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein.
Length = 894
Score = 32.3 bits (70), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +1
Query: 811 PPPXXXHTPR-PXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P P PP P PP P GPPPP
Sbjct: 79 PPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFPMAHPPNLGPPPP 131
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.5 bits (68), Expect = 4.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PP P P P P P P PP P PPPP
Sbjct: 86 PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPP 136
Score = 30.7 bits (66), Expect = 8.4
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 811 PPPXXXHTP-RPXXPXXXXPPPXXXPXTXPPXP 906
PPP TP P P PPP P PP P
Sbjct: 121 PPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 153
>AK091683-1|BAC03720.1| 749|Homo sapiens protein ( Homo sapiens
cDNA FLJ34364 fis, clone FEBRA2015175, weakly similar to
Mus musculus (clone E5.53) Huntington disease (hdh)
gene. ).
Length = 749
Score = 31.5 bits (68), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 808 HPPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
HPPP P P P PPP P PP P
Sbjct: 654 HPPPPPP--PPPPPPLALPPPPPPPPPLPPPLP 684
>AK056450-1|BAB71186.1| 568|Homo sapiens protein ( Homo sapiens
cDNA FLJ31888 fis, clone NT2RP7003055. ).
Length = 568
Score = 31.5 bits (68), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 808 HPPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
HPPP P P P PPP P PP P
Sbjct: 336 HPPPPPP--PPPPPPLALPPPPPPPPPLPPPLP 366
>AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.
Length = 1652
Score = 31.5 bits (68), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 808 HPPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
HPPP P P P PPP P PP P
Sbjct: 1420 HPPPPPP--PPPPPPLALPPPPPPPPPLPPPLP 1450
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.5 bits (68), Expect = 4.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PP P P P P P P PP P PPPP
Sbjct: 631 PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPP 681
Score = 30.7 bits (66), Expect = 8.4
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 811 PPPXXXHTP-RPXXPXXXXPPPXXXPXTXPPXP 906
PPP TP P P PPP P PP P
Sbjct: 666 PPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 698
>L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiesterase
protein.
Length = 809
Score = 31.1 bits (67), Expect = 6.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPP 900
PPP P+P P PPP P PP
Sbjct: 59 PPPPPSPQPQPQCPLQPPPPPPLPPPPPPP 88
>BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 352 PKXGXGGXHPPPXGGXAXSGGGXXPSXXXPP 444
P+ GG PP GG SGG P+ PP
Sbjct: 128 PRSVRGGPKPPGRGGARASGGAAGPAPAMPP 158
>AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 352 PKXGXGGXHPPPXGGXAXSGGGXXPSXXXPP 444
P+ GG PP GG SGG P+ PP
Sbjct: 128 PRSVRGGPKPPGRGGARASGGAAGPAPAMPP 158
>AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 31.1 bits (67), Expect = 6.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 352 PKXGXGGXHPPPXGGXAXSGGGXXPSXXXPP 444
P+ GG PP GG SGG P+ PP
Sbjct: 128 PRSVRGGPKPPGRGGARASGGAAGPAPAMPP 158
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/95 (28%), Positives = 28/95 (29%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP P P + G G PP P PP PP
Sbjct: 1296 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL-PGVGIPPPPPLPGAGIPP 1351
Query: 446 XGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
G P P PP G G PP P L G
Sbjct: 1352 PPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSG 1385
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/95 (28%), Positives = 28/95 (29%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP P P + G G PP P PP PP
Sbjct: 1296 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL-PGVGIPPPPPLPGAGIPP 1351
Query: 446 XGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
G P P PP G G PP P L G
Sbjct: 1352 PPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSG 1385
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/95 (28%), Positives = 28/95 (29%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP P P + G G PP P PP PP
Sbjct: 1296 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL-PGVGIPPPPPLPGAGIPP 1351
Query: 446 XGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
G P P PP G G PP P L G
Sbjct: 1352 PPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSG 1385
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/95 (28%), Positives = 28/95 (29%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP P P + G G PP P PP PP
Sbjct: 1296 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL-PGVGIPPPPPLPGAGIPP 1351
Query: 446 XGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
G P P PP G G PP P L G
Sbjct: 1352 PPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSG 1385
>AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21776 fis, clone HEP00171. ).
Length = 274
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PPP H P P P PP P T PP P
Sbjct: 224 PPPPAPHCP-PPPPSAPTPPIPSPPSTLPPPP 254
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPP 963
PPP +TP P P PPP P P P PPP
Sbjct: 216 PPPAPIYTPPPPAP-HCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPP 265
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P T PP P PPPP
Sbjct: 403 PPPLTPPAPSP-------PPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPP 447
>AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marker 8
precursor protein.
Length = 564
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PPP H P P P PP P T PP P
Sbjct: 514 PPPPAPHCP-PPPPSAPTPPIPSPPSTLPPPP 544
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPP 963
PPP +TP P P PPP P P P PPP
Sbjct: 506 PPPAPIYTPPPPAP-HCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPP 555
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P T PP P PPPP
Sbjct: 293 PPPLTPPAPSP-------PPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPP 337
>AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein.
Length = 329
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PPP H P P P PP P T PP P
Sbjct: 279 PPPPAPHCP-PPPPSAPTPPIPSPPSTLPPPP 309
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPP 963
PPP +TP P P PPP P P P PPP
Sbjct: 271 PPPAPIYTPPPPAP-HCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPP 320
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/95 (28%), Positives = 28/95 (29%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSPP 447
PPPP P P + G G PP P PP PP
Sbjct: 763 PPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL-PGVGIPPPPPLPGAGIPP 818
Query: 446 XGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
G P P PP G G PP P L G
Sbjct: 819 PPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSG 852
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 31.1 bits (67), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P T PP P PPPP
Sbjct: 103 PPPLTPPAPSP-------PPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPP 147
>Y13440-1|CAA73851.1| 582|Homo sapiens Rox protein.
Length = 582
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PP H P+P PPP P PP P
Sbjct: 352 PPKLSHRPQPELLKSTLPPPSTTPAPLPPHP 382
>X96401-1|CAA65265.1| 582|Homo sapiens ROX protein protein.
Length = 582
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PP H P+P PPP P PP P
Sbjct: 352 PPKLSHRPQPELLKSTLPPPSTTPAPLPPHP 382
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.4
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP F P
Sbjct: 272 RPPPPVLFPGQPFGQPPLGPLPPGPPPPV--PGYGPPPGPP--PPQQGPPPPPGPFPPRP 327
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P PPP PP G PP P
Sbjct: 328 PGPLGPPLTLAPPPHLPGPPP--GAPPPAP 355
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.4
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP F P
Sbjct: 272 RPPPPVLFPGQPFGQPPLGPLPPGPPPPV--PGYGPPPGPP--PPQQGPPPPPGPFPPRP 327
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P PPP PP G PP P
Sbjct: 328 PGPLGPPLTLAPPPHLPGPPP--GAPPPAP 355
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 30.7 bits (66), Expect = 8.4
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 533 GXGRPPXXEXXPRXXXXPPRXXVFWXSPPXG---GXXXXGCXPPPXXAXPPXGGGCXPPX 363
G G PP P PP P G G G PPP P G PP
Sbjct: 180 GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
Query: 362 P 360
P
Sbjct: 240 P 240
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 30.7 bits (66), Expect = 8.4
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 533 GXGRPPXXEXXPRXXXXPPRXXVFWXSPPXG---GXXXXGCXPPPXXAXPPXGGGCXPPX 363
G G PP P PP P G G G PPP P G PP
Sbjct: 173 GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 232
Query: 362 P 360
P
Sbjct: 233 P 233
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 30.7 bits (66), Expect = 8.4
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 533 GXGRPPXXEXXPRXXXXPPRXXVFWXSPPXG---GXXXXGCXPPPXXAXPPXGGGCXPPX 363
G G PP P PP P G G G PPP P G PP
Sbjct: 180 GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
Query: 362 P 360
P
Sbjct: 240 P 240
>BC117563-1|AAI17564.1| 582|Homo sapiens MAX binding protein
protein.
Length = 582
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PP H P+P PPP P PP P
Sbjct: 352 PPKLSHRPQPELLKSTLPPPSTTPAPLPPHP 382
>BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 808 HPPPXXXHTPRPXXPXXXXPPPXXXPXTXPP 900
HPPP P P P PP P PP
Sbjct: 91 HPPPPQAAPPAPQPPQPAPQPPAPTPAAPPP 121
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.7 bits (66), Expect = 8.4
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP F P
Sbjct: 199 RPPPPVLFPGQPFGQPPLGPLPPGPPPPV--PGYGPPPGPP--PPQQGPPPPPGPFPPRP 254
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P PPP PP G PP P
Sbjct: 255 PGPLGPPLTLAPPPHLPGPPP--GAPPPAP 282
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.7 bits (66), Expect = 8.4
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP F P
Sbjct: 309 RPPPPVLFPGQPFGQPPLGPLPPGPPPPV--PGYGPPPGPP--PPQQGPPPPPGPFPPRP 364
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P PPP PP G PP P
Sbjct: 365 PGPLGPPLTLAPPPHLPGPPP--GAPPPAP 392
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 30.7 bits (66), Expect = 8.4
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 533 GXGRPPXXEXXPRXXXXPPRXXVFWXSPPXG---GXXXXGCXPPPXXAXPPXGGGCXPPX 363
G G PP P PP P G G G PPP P G PP
Sbjct: 180 GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPR 239
Query: 362 P 360
P
Sbjct: 240 P 240
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.7 bits (66), Expect = 8.4
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP F P
Sbjct: 272 RPPPPVLFPGQPFGQPPLGPLPPGPPPPV--PGYGPPPGPP--PPQQGPPPPPGPFPPRP 327
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P PPP PP G PP P
Sbjct: 328 PGPLGPPLTLAPPPHLPGPPP--GAPPPAP 355
>AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 808 HPPPXXXHTPRPXXPXXXXPPPXXXPXTXPP 900
HPPP P P P PP P PP
Sbjct: 91 HPPPPQAAPPAPQPPQPAPQPPAPTPAAPPP 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,236,267
Number of Sequences: 237096
Number of extensions: 1316737
Number of successful extensions: 8562
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7066
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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