Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J22
(975 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.025
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.025
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.033
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.033
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.033
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 33 0.31
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.54
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.54
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.54
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.71
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 32 0.71
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.94
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 3.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 5.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.0
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 5.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.0
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 5.0
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 29 5.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.6
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 6.6
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 6.6
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.8
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 8.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.025
Identities = 27/90 (30%), Positives = 27/90 (30%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP P
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPP-----GMPGMPPPP---PPSRFGPPGMGGMPPPP 337
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P G G PPP P G G PP P
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 10/76 (13%)
Frame = -2
Query: 521 PPXXEXXPRXXXXPPRXXVFWXSPPX-------GGXXXXGCXPPPXXAX--PPXGGGCXP 369
PP PR PP W PP G G PPP + PP GG P
Sbjct: 278 PPTPGMTPRPP--PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Query: 368 PXPX-LGXXGGXXXXP 324
P P + GG P
Sbjct: 336 PPPPGMRYPGGMPPPP 351
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 4/93 (4%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGR----PPXXEXXPRXXXXPPRXXVFW 459
PPPP P P F G G PP P PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY-- 355
Query: 458 XSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P G PP PP G G PP P
Sbjct: 356 ---PSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.025
Identities = 27/90 (30%), Positives = 27/90 (30%)
Frame = -2
Query: 629 RPPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXXPPRXXVFWXSP 450
RPPPP P P G G PP P PP P
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPP-----GMPGMPPPP---PPSRFGPPGMGGMPPPP 347
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P G G PPP P G G PP P
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 10/76 (13%)
Frame = -2
Query: 521 PPXXEXXPRXXXXPPRXXVFWXSPPX-------GGXXXXGCXPPPXXAX--PPXGGGCXP 369
PP PR PP W PP G G PPP + PP GG P
Sbjct: 288 PPTPGMTPRPP--PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Query: 368 PXPX-LGXXGGXXXXP 324
P P + GG P
Sbjct: 346 PPPPGMRYPGGMPPPP 361
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 4/93 (4%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGR----PPXXEXXPRXXXXPPRXXVFW 459
PPPP P P F G G PP P PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY-- 365
Query: 458 XSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
P G PP PP G G PP P
Sbjct: 366 ---PSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.033
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -2
Query: 536 GGXGRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPX 357
GG PP P PP PP GG PPP PP GGC PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPP---PPPPGGCPPPPPP 774
Query: 356 L---GXXGGXXXXP 324
G GG P
Sbjct: 775 PPPGGFKGGPPPPP 788
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 527 GRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLG 351
G PP P PP PP G PPP PP GG PP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPG 766
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +1
Query: 325 GXXXXPPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
G PP P G PPP GG GG P PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGG 750
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
P P G PPP GG GG P PP GG
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P PP P GPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP---------PGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.033
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -2
Query: 536 GGXGRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPX 357
GG PP P PP PP GG PPP PP GGC PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPP---PPPPGGCPPPPPP 774
Query: 356 L---GXXGGXXXXP 324
G GG P
Sbjct: 775 PPPGGFKGGPPPPP 788
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 527 GRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLG 351
G PP P PP PP G PPP PP GG PP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPG 766
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +1
Query: 325 GXXXXPPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
G PP P G PPP GG GG P PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGG 750
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
P P G PPP GG GG P PP GG
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P PP P GPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP---------PGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.033
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -2
Query: 536 GGXGRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPX 357
GG PP P PP PP GG PPP PP GGC PP P
Sbjct: 307 GGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPP---PPPPGGCPPPPPP 357
Query: 356 L---GXXGGXXXXP 324
G GG P
Sbjct: 358 PPPGGFKGGPPPPP 371
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 527 GRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLG 351
G PP P PP PP G PPP PP GG PP P G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPG 349
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +1
Query: 325 GXXXXPPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
G PP P G PPP GG GG P PP GG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGG 333
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGG 453
P P G PPP GG GG P PP GG
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGG--PPPPPPPPGG 350
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP P P PPP P PP P GPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP---------PGGFKGGPPPP 370
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Frame = -2
Query: 467 VFWXSPPXGGXXXXGCXPPPXXAXPPX------GGGCXPPXPXLGXXG 342
V + S GG C PPP PP GGG PP P G G
Sbjct: 11 VAYASACFGGATQNSCCPPPQCCGPPPACGNPCGGGFGPPPPPFGPVG 58
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.54
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXX---PPRXXVFWX 456
PPPP P G PP P PPR
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 455 SPPXGGXXXXGCXPPP--XXAXPPXGGGCXPPXP 360
PP G G PPP + PP G G PP P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P PPP PP P G PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P P PPP P PP P PPPP
Sbjct: 256 PPPPAAGSPPP--PRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.54
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXX---PPRXXVFWX 456
PPPP P G PP P PPR
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 455 SPPXGGXXXXGCXPPP--XXAXPPXGGGCXPPXP 360
PP G G PPP + PP G G PP P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P PPP PP P G PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P P PPP P PP P PPPP
Sbjct: 277 PPPPAAGSPPP--PRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.54
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = -2
Query: 626 PPPPXXXXXXXXXXXXXXXXGPXXPXVFFXGGXGRPPXXEXXPRXXXX---PPRXXVFWX 456
PPPP P G PP P PPR
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 455 SPPXGGXXXXGCXPPP--XXAXPPXGGGCXPPXP 360
PP G G PPP + PP G G PP P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P PPP PP P G PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP +P P P PPP P PP P PPPP
Sbjct: 262 PPPPAAGSPPP--PRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.71
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAX-SGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXX 516
PP PK G G PPP G SG G PP G G
Sbjct: 127 PPPPPK-GTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNA 185
Query: 517 GGRPXPPXKKT 549
RP PP K T
Sbjct: 186 SRRPPPPPKGT 196
Score = 31.9 bits (69), Expect = 0.71
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAX-SGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXX 516
PP PK G G PPP G SG G PP G G
Sbjct: 220 PPPPPK-GTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNA 278
Query: 517 GGRPXPPXKKT 549
RP PP K T
Sbjct: 279 SRRPPPPPKGT 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAX-SGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXX 516
PP PK G G PPP G SG G PP G G
Sbjct: 96 PPPPPK-GTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNA 154
Query: 517 GGRPXPPXKKT 549
RP PP K T
Sbjct: 155 SRRPPPPPKGT 165
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAX-SGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXX 516
PP PK G G PPP G S G PP G T G
Sbjct: 189 PPPPPK-GTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNA 247
Query: 517 GGRPXPPXKKT 549
RP PP K T
Sbjct: 248 SRRPPPPPKGT 258
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPP 366
P GG GC PPP A GG PP
Sbjct: 20 PSGGGGGCGCAPPPPPACGCGGGAAPPP 47
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +1
Query: 343 PXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXXGG 522
P P PP GG S G P PP G RGG RG +S G
Sbjct: 1425 PTPPSQNQYSMPPPVMGGHEGSWRGGPPMRGMPPLG----MMRGRGGPPPPRGMNSPMRG 1480
Query: 523 RPXP 534
P P
Sbjct: 1481 MPPP 1484
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 452 PPXGGXXXXGCXPPPXXAXPPXGGGCXPPXP 360
PP GG G PPP PP G PP P
Sbjct: 1575 PPRGGSHCQG--PPPLMGGPPPRLGMPPPGP 1603
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 443 GGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXGG 339
GG GC PPP P GGGC G GG
Sbjct: 45 GGGCGGGCAPPP--PPPACGGGCGGGGGGCGGGGG 77
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 905 GXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
G GG G GGG G G G C GGG
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
GGGG G G GG G GGG G G G C GGG
Sbjct: 135 GGGGGGCGGGGGGGCGGGGGGCGGG--GGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 443 GGXXXXGCXPPPXXAXPPXGGGC 375
GG GC PPP P GGGC
Sbjct: 102 GGGCGGGCAPPP--PPPACGGGC 122
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
GGGG G G GG G GG G G G C GGG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 905 GXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGGW 807
G GG G GGG G G G GGG+
Sbjct: 240 GSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
GGGG G GG G GGG G G G C GGG
Sbjct: 126 GGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGC---GGG 174
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
GGGG G G GG G GG G G G C GGG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 905 GXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGGW 807
G GG G GGG G G G GGG+
Sbjct: 240 GSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXGXXGRGVCXXXGGG 810
GGGG G GG G GGG G G G C GGG
Sbjct: 126 GGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGC---GGG 174
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 536 GGXGRPPXXEXXPRXXXXPPRXXVFWXSPPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPX 357
GG G PP PP+ PP G G PP PP G PP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG--GPGAYGPPPTGFPPVGA---PPPGA 461
Query: 356 LGXXGG 339
G GG
Sbjct: 462 AGAPGG 467
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +1
Query: 352 PKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGGEXQXTXXR-GGXXXXRGXHSXXGGRP 528
P+ G GG PPP GG G P PP G GG RG S G R
Sbjct: 426 PQGGPGGFGPPPPGGPGAYG---PPPTGFPPVGAPPPGAAGAPGGNPFARGP-SATGYRQ 481
Query: 529 XP 534
P
Sbjct: 482 SP 483
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 340 PPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXXG 519
PP F + G PPP G G G S PP GG RG G
Sbjct: 744 PPMFQQGFNAGAPPPPFG----RGAGPMSSFPPPPRGGMHHMPP----PPSFRGGRGGHG 795
Query: 520 GRPXPPXKKTXG 555
G P P + G
Sbjct: 796 GPPPPHFDRRGG 807
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 965 GGGGPXXXXXXXXXXXXXGXGXGGXVXGXXXGGGXXXXG-XXGRGVCXXXGGG 810
GGGGP G G GG G GGG G GRG GGG
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGG 94
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PP P P P PPP PP P PPPP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 443 GGXXXXGCXPPPXXAXPPXGGGCXPPXPXLG 351
GG C PPP PP GGGC P G
Sbjct: 22 GGGGGGCCAPPPP---PPCGGGCGGGAPAAG 49
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 9/51 (17%)
Frame = -2
Query: 449 PXGGXXXXGCXPPPXXAXP---PXGGGC----XPP--XPXLGXXGGXXXXP 324
P GG GC PPP P GGG PP P LG GG P
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 814 PPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PP P P P PPP P PP P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPPXP 906
PPP P P PPP P PP P
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +1
Query: 298 QKRXXXQXXGXXXXPPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGGEXQXTXXR 477
Q+R Q PP + G G PP G G P PP G+ Q +
Sbjct: 710 QQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMP----PPPHGQYQPQQQQ 765
Query: 478 GGXXXXRGXHSXXG 519
GG G H G
Sbjct: 766 GGPMGPPGGHHEGG 779
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = -2
Query: 452 PPXGGXXXXGCX-PPPXXAXPPXGGGCXPPXP 360
PP GG PP PP G G PP P
Sbjct: 220 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +1
Query: 298 QKRXXXQXXGXXXXPPXFPKXGXGGXHPPPXGGXAXSGGGXXPSXXXPPXGGEXQXTXXR 477
Q+R Q PP + G G PP G G P PP G+ Q +
Sbjct: 710 QQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMP----PPPHGQYQPQQQQ 765
Query: 478 GGXXXXRGXHSXXG 519
GG G H G
Sbjct: 766 GGPMGPPGGHHEGG 779
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 829 HTPRPXXPXXXXPPPXXXPXTXPPXP 906
H P+P P PP P T PP P
Sbjct: 4 HPPQPHPPMPPMPPVTAPPGTMPPMP 29
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = -2
Query: 452 PPXGGXXXXGCX-PPPXXAXPPXGGGCXPPXP 360
PP GG PP PP G G PP P
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = -2
Query: 452 PPXGGXXXXGCX-PPPXXAXPPXGGGCXPPXP 360
PP GG PP PP G G PP P
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPP 366
P GG GC PPP GG PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGPSLPP 47
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPP 900
PPP + P P P PP P + PP
Sbjct: 263 PPPPPPNIPLPTIPQEVQSPPSPRPTSVPP 292
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPPPXXXPXTXPP 900
PPP + P P P PP P + PP
Sbjct: 263 PPPPPPNIPLPTIPQEVQSPPSPRPTSVPP 292
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPP 366
P GG GC PPP PP GC P
Sbjct: 20 PSGGGGGCGCAPPP----PPPPCGCGAP 43
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 449 PXGGXXXXGCXPPPXXAXPPXGGGCXPP 366
P GG GC PPP PP GC P
Sbjct: 20 PSGGGGGCGCAPPP----PPPPCGCGAP 43
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 PXFPKXGXGGXHPP-PXGGXAXSGGGXXPSXXXPPXGGEXQXTXXRGGXXXXRGXHSXXG 519
P P G G PP P GG G PP G Q G G
Sbjct: 148 PAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVR 207
Query: 520 GRPXPP 537
P PP
Sbjct: 208 SLPSPP 213
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 5/57 (8%)
Frame = +1
Query: 811 PPPXXXHTPRPXXPXXXXPP-----PXXXPXTXPPXPXXXXXXXXXXXXXXXGPPPP 966
PPP TP P P PP P P PP P PPPP
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP--PPPP 196
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 452 PPXGGXXXXGCXPPPXXAXPPXGGGCXPPXPXLGXXG 342
PP G PPP P GG PP P G G
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,959,632
Number of Sequences: 27780
Number of extensions: 151776
Number of successful extensions: 1182
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -