Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J21
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.64 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   4.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   4.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   4.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.8  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 676 AARRVRAKSRGTRSTERWLRRHHRRP 599
           AARR  A    T + + WL  H + P
Sbjct: 85  AARRKNATRESTATLKAWLNEHKKNP 110


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 640 VYPSTSHVPVSPPMSVREMASVN 708
           V+P+T++  ++PP SV+  +S N
Sbjct: 454 VFPNTNNAIMTPPASVQTESSDN 476


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 637 FVYPSTSHVPVSPPMSV 687
           + Y S SHV + PP+SV
Sbjct: 281 YEYRSLSHVSLRPPLSV 297


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 640 VYPSTSHVPVSPPMSVREMASVN 708
           V+P+T++  ++PP SV+  +S N
Sbjct: 402 VFPNTNNAIMTPPASVQTESSDN 424


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -2

Query: 727 QFPRPENSRWPSPLPTSAARRVRAKSRGTRSTE 629
           Q    EN   P P PT  +RR     R T+  E
Sbjct: 243 QLKELENPPTPKPRPTKVSRRKPRPPRPTQVEE 275


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 392 PALQGYRRCLRPYP 433
           P +  YR C RPYP
Sbjct: 251 PYVPFYRYCYRPYP 264


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +2

Query: 170 IPHPRVPQLPPRXYSPSEDHIIEQNVEP 253
           +P P VP++PP  +  +      ++ +P
Sbjct: 206 VPKPTVPKIPPAEFPTTSSSSALESPDP 233


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 170 IPHPRVPQLPPRXY 211
           +P P VP++PP  +
Sbjct: 206 VPKPTVPKIPPAEF 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,776
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)