Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J21
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   237   1e-64
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   237   1e-64
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   9.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  237 bits (579), Expect = 1e-64
 Identities = 116/170 (68%), Positives = 132/170 (77%)
 Frame = +3

Query: 243 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 422
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 423 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVLALLRW*SG 602
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG   +    L        
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 603 LRWCRRSHLSVLRVPLDFARTRLAADVGKGDGQREFSGLGNCISXIXKSD 752
                 +       PLDFARTRLAADVGK  G+REF+GLGNC++ I K+D
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKAD 170



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 33/161 (20%), Positives = 63/161 (39%)
 Frame = +3

Query: 270 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 449
           F  +  +GG + A S   V P++  +  L    V K    ++ + G+ +   +I K  G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172

Query: 450 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVLALLRW*SGLRWCRRSHL 629
              +RG   +V      +A  F F D  +    G          L+ W  G+     +  
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTAR----GMLPDPKKTPFLISW--GIAQVVTTVA 226

Query: 630 SVLRVPLDFARTRLAADVGKGDGQREFSGLGNCISXIXKSD 752
            ++  P D  R R+    G+   +  +    +C + I K++
Sbjct: 227 GIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTE 267



 Score = 27.5 bits (58), Expect = 0.18
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 330 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 488
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  237 bits (579), Expect = 1e-64
 Identities = 116/170 (68%), Positives = 132/170 (77%)
 Frame = +3

Query: 243 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 422
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 423 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVLALLRW*SG 602
           VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG   +    L        
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120

Query: 603 LRWCRRSHLSVLRVPLDFARTRLAADVGKGDGQREFSGLGNCISXIXKSD 752
                 +       PLDFARTRLAADVGK  G+REF+GLGNC++ I K+D
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKAD 170



 Score = 33.9 bits (74), Expect = 0.002
 Identities = 33/161 (20%), Positives = 63/161 (39%)
 Frame = +3

Query: 270 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 449
           F  +  +GG + A S   V P++  +  L    V K    ++ + G+ +   +I K  G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172

Query: 450 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVLALLRW*SGLRWCRRSHL 629
              +RG   +V      +A  F F D  +    G          L+ W  G+     +  
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYDTAR----GMLPDPKKTPFLISW--GIAQVVTTVA 226

Query: 630 SVLRVPLDFARTRLAADVGKGDGQREFSGLGNCISXIXKSD 752
            ++  P D  R R+    G+   +  +    +C + I K++
Sbjct: 227 GIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTE 267



 Score = 27.5 bits (58), Expect = 0.18
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 330 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 488
           P + V+  + +Q  S +  ++  YK  +  +  I K +G  +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 622 LRRHHRRPDYQRSNARTASSCQHRP 548
           L+RHH   ++      TA    HRP
Sbjct: 138 LQRHHHLQNHHHHLQSTAVQDHHRP 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,556
Number of Sequences: 438
Number of extensions: 4690
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)