Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J20
         (944 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    26   0.37 
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    26   0.37 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    25   0.65 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    25   0.65 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.86 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    25   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   8.0  

>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 393 NGTPSTER*SPLENVAWMPV 334
           NG P+    +PL NV W PV
Sbjct: 474 NGNPNPSEENPLINVTWKPV 493


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 393 NGTPSTER*SPLENVAWMPV 334
           NG P+ +  +PL NV W PV
Sbjct: 474 NGDPNPKEKTPLINVTWKPV 493


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 393 NGTPSTER*SPLENVAWMPV 334
           NG P+    +PL NV W PV
Sbjct: 474 NGDPNPTEENPLINVTWKPV 493


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 393 NGTPSTER*SPLENVAWMPV 334
           NG P+    +PL NV W PV
Sbjct: 474 NGDPNPTEENPLINVTWKPV 493


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = +2

Query: 677 TSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPPPXHP 832
           T P   P P      GP   PP        P     P +P PP  PP   +P
Sbjct: 147 TMPKYEPNPSIIDP-GP-ALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 25.0 bits (52), Expect = 0.86
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 782 FPXIPXPPPXPPPPXHPXPPXXP 850
           +P +P  PP P PP  P     P
Sbjct: 174 YPPLPQVPPLPLPPIFPPTMINP 196



 Score = 25.0 bits (52), Expect = 0.86
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 803 PPXPPPPXHPXPPXXPP 853
           PP P  P  P PP  PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 393 NGTPSTER*SPLENVAWMPV 334
           NG P+ +  +P  NV W PV
Sbjct: 473 NGDPNPKEKTPFINVTWKPV 492


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 506  LSTVNVGEVSIRIHGGYSFRHLRHYLVHNRP 414
            +S  N GE S  +   Y    + H L+ N P
Sbjct: 1366 VSRNNAGEYSCHVENDYGQDSVTHQLIVNAP 1396


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 791 IPXPPPXPPPPXHP 832
           +P   P P PP HP
Sbjct: 114 VPPLTPSPGPPSHP 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,676
Number of Sequences: 336
Number of extensions: 4425
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26582281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)