Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J20
(944 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.025
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.044
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.059
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.24
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.31
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.36
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.72
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.95
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.95
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.2
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 26 6.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.7
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 6.7
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 26 8.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 22 9.6
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = -3
Query: 852 GGXXGGXGCXGGGGXGGGXGIXGXXXXXGXXXXXXGXGGXRKGPXXXXXXGIGVNXGEVX 673
GG GG G GG G G G G G GG GP G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 672 SLGGTGQVGRRPG 634
GG G G PG
Sbjct: 247 FGGGLGGFGGGPG 259
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 635 PGRLPTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXP 814
P P P P +E P P P PP P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 815 PPPXHPXPPXXPP 853
PP P PP
Sbjct: 184 PPSAPSLPSAVPP 196
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +2
Query: 725 PFRXPPXPXXXXXXPXXXXFPXIPXP-PPXP---PPPXHPXPPXXPPP 856
P PP P P P IP PP P PPP P P PP
Sbjct: 140 PTSAPPRPSIPPPSPASA--PPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/64 (25%), Positives = 18/64 (28%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPPPX 826
P+ P P P + P P P P P PP PPPP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 827 HPXP 838
P
Sbjct: 207 SQAP 210
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.044
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +2
Query: 641 RLPTWPVPPNEXTSPXLTP-IPXXXXXXGPFRXPPXPXXXXXXPXXXXFPX-IPXPPPXP 814
R T PVP P P +P P P P P P +P PP P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 815 PPPXHPXPPXXPPP 856
P P P P P
Sbjct: 471 PAAPAPPPAPAPAP 484
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +2
Query: 647 PTWPVPPNEXTS--PXLTP-IPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPP-XP 814
P P PP+ S P L P P P P P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 815 PPPXHPXPPXXPP 853
PP P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 785 PXIPX--PPPXPPPPXHPXPPXXPPPXXG 865
P IP PP P P PP PPP G
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNG 262
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +3
Query: 849 PPPXXXTXXXPAPXPKQXSXSXPPXPP 929
PPP P P Q + PP PP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 849 PPPXXX--TXXXPAPXPKQXSXSXPPXPPP 932
PPP T P P + S PP PPP
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 23.0 bits (47), Expect(2) = 2.3
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +2
Query: 662 PPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPP 820
PPN P + P+ + PP P PPP PPP
Sbjct: 267 PPNSPPRP-IAPVSMNPAINSTSK-PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 23.0 bits (47), Expect(2) = 2.3
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +2
Query: 803 PPXPPPPXHPXPPXXPPPXXGXXXXXXP 886
PP PPPP P P G P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +2
Query: 767 PXXXXFPXIPXPPPXPPPP----XHPXPPXXPPP 856
P P + PPP PPPP P PP PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +2
Query: 731 RXPPXPXXXXXXPXXXXFPXIPXPPPXP---PPPXHPXPP----XXPPP 856
+ PP P P P IP PPP P PP P PP PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 740 PXPXXXXXXPXXXXFPXIPXPPPXPPPPXHPXPPXXPPP 856
P P P P PPP P PP PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +2
Query: 656 PVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPPPXHP 832
P PP P TP P P PP P P + P PPPP P
Sbjct: 733 PPPPPAVIVP--TPAP------APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 849 PPPXXXTXXXPAPXPKQXSXSXPPXPPP 932
PP P P P + + PP PPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 794 PXPPPXPPPPXHPXPPXXPPP 856
P PP PPPP PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +2
Query: 785 PXIPXPPPXPP---PPXHPXPPXXPPP 856
P P PPP PP PP P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP--PPP 30
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 800 PPPXPPPPXHPXPPXXPPPXXG 865
PPP PPP P PPP G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.24
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 785 PXIPXPPPXPPPPXHPXPPXXPPPXXGXXXXXXP 886
P + P P PPP P PP PP G P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 737 PPXPXXXXXXPXXXXFPXIPXPPPXPPPPXHPXPPXXPPPXXG 865
P P P P +P PP PPP P P G
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Frame = +2
Query: 737 PPXPXXXXXXPXXXXFPXIPXPPPXPP-PPXHPXPP 841
PP P P P PP P PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXGPFRXP--PXPXXXXXXPXXXXFPXIPXPPPXPPP 820
P+ P PP +P + +P P P P P P P P P
Sbjct: 602 PSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEA 661
Query: 821 PXHPXPPXXP 850
P P PP P
Sbjct: 662 PSVPQPPAAP 671
Score = 29.1 bits (62), Expect = 0.95
Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +2
Query: 629 LVPGRLPTWPVPPNEXTSPXLTPIPXXXXXXGPFRXP--PXPXXXXXXPXXXXFPXIPXP 802
+VP L P PP +P + +P P P P P P P
Sbjct: 567 VVPEALSV-PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAV 625
Query: 803 PPXPPPPXHPXPPXXP 850
P P P P PP P
Sbjct: 626 PVVPEAPSVPQPPAAP 641
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPPPX 826
P PV P + P +P P P P P P P P P
Sbjct: 548 PAAPVVPEAPSVPQRPAVPVVPEALSV----PQPPVAPVAPEVPSVPQPPVAPVVPEAPS 603
Query: 827 HPXPPXXP 850
P PP P
Sbjct: 604 VPQPPVAP 611
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect(2) = 0.36
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 791 IPXPPPXPPPPXHP 832
+P PPP PPP P
Sbjct: 235 LPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 0.36
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 812 PPPPXHPXPPXXPP 853
PPPP P P PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.72
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Frame = +2
Query: 659 VPPNEXTSPXLTPIPXXXXXXGPF-RXPPXPXXXXXXPXXXXFPXIPXPP-PXPPPPXHP 832
+ NE TS P+ P R PP P P +P P P P P P
Sbjct: 80 ISKNEPTSEASKPLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEP 139
Query: 833 XPPXXPPP 856
P P P
Sbjct: 140 PLPNEPVP 147
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 852 GGXXGGXGCXGGGGXGGGXGIXGXXXXXGXXXXXXGXGGXRKG 724
GG GG G GGG GG G G G G G R G
Sbjct: 26 GGFGGGRGGARGGGRGGARG--GRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = -3
Query: 927 GGXGGXTGXTVWXXGXXXXXXPXXGGGXXGGXGCXGGGGXGGGXGIXGXXXXXGXXXXXX 748
GG GG G G GGG G G GG GG G G G
Sbjct: 9 GGRGGSRGGR----GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG--ARGGRGGSSG 62
Query: 747 GXGGXRKG 724
G GG + G
Sbjct: 63 GRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.95
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 15/82 (18%)
Frame = +2
Query: 656 PVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXX----FPXIPXP----PPX 811
PVP P P P PP P P P +P P PP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 812 PPP---PXHPXP----PXXPPP 856
PPP P P P P PPP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/70 (25%), Positives = 22/70 (31%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPPPX 826
P+ PP S + P+P PP P P +P PP P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGV-----PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 827 HPXPPXXPPP 856
P P PP
Sbjct: 1219 VPTPSAGLPP 1228
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/73 (26%), Positives = 20/73 (27%), Gaps = 4/73 (5%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXGPF----RXPPXPXXXXXXPXXXXFPXIPXPPPXP 814
P VPP S P+P P PP P P P PP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 815 PPPXHPXPPXXPP 853
P P P P
Sbjct: 1067 PAPSSEIPSIPAP 1079
Score = 27.1 bits (57), Expect = 3.8
Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 8/82 (9%)
Frame = +2
Query: 632 VPGRLPTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXP--- 802
VP T PVP + +P P P P P P P +P P
Sbjct: 1043 VPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP--SIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 803 -PPXPPP----PXHPXPPXXPP 853
PP P P P P P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPP 1122
Score = 25.8 bits (54), Expect = 8.9
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = +2
Query: 647 PTWPVPPNEXTSPXLTPIPXXXXXXG--PFRXPPXPXXXXXXPXXXXFPXIPXPPPXPPP 820
P PVP P T P P PP P P IP P PP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP------APSSEIPSIPAPSGAPPV 1085
Query: 821 PXHPXPPXXPPP 856
P P P P
Sbjct: 1086 PAPSGIPPVPKP 1097
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.2
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 9/86 (10%)
Frame = +2
Query: 635 PGRLPTWPVPPNEXTSPXLTPIPXXXXXXGPFRXPPXPXXXXXXPXXXXFPXIPXPP--- 805
P LP W P + +P P P P P P IP P
Sbjct: 457 PSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVP-LPPIPGAPGMP 515
Query: 806 ----PXPP--PPXHPXPPXXPPPXXG 865
PP PP PP P P G
Sbjct: 516 NLNMSQPPMVPPGMALPPGMPAPFPG 541
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 791 IPXPPPXPPPPXHPXPP 841
+P PP PPPP PP
Sbjct: 222 VPRGPPSPPPPVLHSPP 238
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 806 PXPPPPXHPXPPXXPPP 856
P PP H PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/86 (24%), Positives = 26/86 (30%), Gaps = 7/86 (8%)
Frame = +2
Query: 629 LVPGRLPTWPVPPNEXTSPX------LTPIPXXXXXXGPFRXPPXPXXXXXX-PXXXXFP 787
L PG P P P + +P + P+P PP FP
Sbjct: 210 LPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNVLPFTAAQHFP 269
Query: 788 XIPXPPPXPPPPXHPXPPXXPPPXXG 865
+P P P P PPP G
Sbjct: 270 GMPAMPMMNVPMGPGGAPLVPPPPPG 295
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 404 PHDWADYEPDNAGDDENCIL 463
PH W DYE ++ +NC L
Sbjct: 174 PHCWVDYESNDIESVQNCWL 193
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 794 PXPPPXPPPP 823
P PPP PP P
Sbjct: 905 PTPPPPPPLP 914
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 821 PXHPXPPXXPPP 856
P P PP PPP
Sbjct: 942 PAFPPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,264,370
Number of Sequences: 5004
Number of extensions: 66957
Number of successful extensions: 415
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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