Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J19
         (877 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P15500 Cluster: Juvenile hormone-binding protein precur...    91   3e-17
UniRef50_Q8ITP4 Cluster: Juvenile hormone binding protein; n=1; ...    60   1e-07

>UniRef50_P15500 Cluster: Juvenile hormone-binding protein
           precursor; n=11; Obtectomera|Rep: Juvenile
           hormone-binding protein precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 229

 Score = 91.5 bits (217), Expect = 3e-17
 Identities = 56/169 (33%), Positives = 69/169 (40%)
 Frame = +3

Query: 147 SDGXALLKPCKLGXXXCLSXAXXXFLXXXXXGXPXXXXWPIDPLVVXSLXVXAPSXAGXV 326
           SD  AL +PC      CLS A   FL     G P     PIDPL++ SL V A    G +
Sbjct: 3   SDQGALFEPCSTQDIACLSRATQQFLEKACRGVPEYDIRPIDPLIISSLDVAAYDDIGLI 62

Query: 327 XRFKXXXXXGXXXXXXSXFQMXXXAXXVLLXXXADXHXVGXLVXELXXXSXSFTGLYTAD 506
             FK     G      S F+M      VLL   AD + V  +V EL   S SF G+    
Sbjct: 63  FHFKNLNITGLKNQKISDFRMDTTRKSVLLKTQADLNVVADVVIELSKQSKSFAGVMNIQ 122

Query: 507 TNVXGAVRXGXXLKXXXXGVXHFXVQPXXXXCXXXGXPXXPLSSXLXXA 653
            ++ G  +    L+    GV HF V      C   G P   L+  L  A
Sbjct: 123 ASIIGGAKYSYDLQDDSKGVKHFEVGQETISCESIGEPAVNLNPELADA 171


>UniRef50_Q8ITP4 Cluster: Juvenile hormone binding protein; n=1;
           Galleria mellonella|Rep: Juvenile hormone binding
           protein - Galleria mellonella (Wax moth)
          Length = 245

 Score = 59.7 bits (138), Expect = 1e-07
 Identities = 45/172 (26%), Positives = 61/172 (35%), Gaps = 3/172 (1%)
 Frame = +3

Query: 147 SDGXAL---LKPCKLGXXXCLSXAXXXFLXXXXXGXPXXXXWPIDPLVVXSLXVXAPSXA 317
           SDG  L    +PC +    C+S A   FL     G P      +DP+ + SL        
Sbjct: 18  SDGSKLNLSTEPCDVSDIECISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEKSIEKIN 77

Query: 318 GXVXRFKXXXXXGXXXXXXSXFQMXXXAXXVLLXXXADXHXVGXLVXELXXXSXSFTGLY 497
             V R+      G      S F +      V      +    G LV EL   S ++TG  
Sbjct: 78  LNV-RYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKVNFTAEGKLVIELPKSSKTYTGEV 136

Query: 498 TADTNVXGAVRXGXXLKXXXXGVXHFXVQPXXXXCXXXGXPXXPLSSXLXXA 653
           T + +  G       +K    GV H+   P    C   G P   +SS L  A
Sbjct: 137 TIEASAEGGAAYSYSVKTDDKGVEHYEAGPETVSCEIFGEPTLSVSSTLEDA 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,416,764
Number of Sequences: 1657284
Number of extensions: 1918956
Number of successful extensions: 935
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)