Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J15
(945 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.39
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.69
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.2
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 30 2.8
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 30 2.8
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.7
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.7
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.7
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 4.8
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.4
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.5
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 8.5
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 8.5
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 8.5
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 503 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST 604
PKT+P P ++P CW+ F PPR N+T
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNT 453
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 193 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 306
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/67 (32%), Positives = 25/67 (37%)
Frame = -3
Query: 889 GGFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGEXXGXXRRNKNVXGRNXEG 710
GGF + GG G F G GG G + G G G G R GR G
Sbjct: 52 GGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRGG--RGSPRGGRG--G 107
Query: 709 VXGXQGG 689
G +GG
Sbjct: 108 AGGMRGG 114
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = -3
Query: 919 GNPXXPRXXGGGFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGEXXGXXRRN 740
G P R GGG GG G G GG G + G G G G R
Sbjct: 2 GRPEFNRGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFG----GGDRGGFRGG 57
Query: 739 KNVXGRNXEGVXGXQGG 689
+ G + G G +GG
Sbjct: 58 RG--GGDRGGFRGGRGG 72
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 284 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 105
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 104 S 102
S
Sbjct: 136 S 136
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 247 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 417
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 418 TVKLINKRDHHALKLI 465
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 284 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 105
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 104 S 102
S
Sbjct: 136 S 136
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
R08B4.1a protein.
Length = 1137
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = -3
Query: 919 GNPXXPRXXGGGFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGEXXGXXRRN 740
G P GGG GG GN G GG G GA G G G N
Sbjct: 780 GGPTGSSGGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGA-GAGNGNGAGAGN 838
Query: 739 KNVXGR-NXEGVXGXQG 692
N G N G G
Sbjct: 839 GNGAGAGNGNGAGAGNG 855
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = -3
Query: 919 GNPXXPRXXGGGFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGEXXGXXRRN 740
G P GGG GG GN G GG G GA G G G N
Sbjct: 433 GGPTGSSGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGA-GAGNGNGAGAGN 491
Query: 739 KNVXGR-NXEGVXGXQG 692
N G N G G
Sbjct: 492 GNGAGAGNGNGAGAGNG 508
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 239 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 87
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 239 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 87
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 239 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 87
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -2
Query: 239 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 87
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -3
Query: 901 RXXGGGFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGEXXG 755
R GGGF + GG G F G G G + G G G G
Sbjct: 7 RGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGGYDQG 55
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 279 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 115
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Frame = -3
Query: 940 GGXKK*SGNPXXPRXXGG-GFXXRKXGGXXGNFXXGAPGGXXGFWXGAHXXXXGVKXXGE 764
GG GN R GG G G GN+ G G G W G + G + G
Sbjct: 83 GGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGG--GNNDGGWGGNNGGGGGGRGGGG 140
Query: 763 XXGXXRRNKNVXGRNXEGVXGXQGG 689
G R G N G G GG
Sbjct: 141 RGGDGR---GPPGSNGGGDWGGNGG 162
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 889 GGFXXRKXGGXXGNFXXGAPGGXXGF 812
GGF GG G F G PG GF
Sbjct: 196 GGFPFGNQGGNQGGFPFGNPGNQGGF 221
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 271 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 360
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 400 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 555
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 556 NNRVYFKIMSTEDK 597
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +1
Query: 400 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 555
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 556 NNRVYFKIMSTEDK 597
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 187 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 366
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 367 IV--KSYFPIQFRVI 405
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,618,102
Number of Sequences: 27780
Number of extensions: 382567
Number of successful extensions: 1618
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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