Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J14
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 74 2e-13
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 74 2e-13
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 48 1e-05
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 39 0.004
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 39 0.004
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 37 0.022
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 36 0.052
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 31 0.84
Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical p... 31 1.5
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 30 2.6
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 30 2.6
AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81500-8|CAM84816.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75955-3|CAB00114.1| 461|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 29 4.5
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 29 5.9
U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical ... 28 7.8
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 73.7 bits (173), Expect = 2e-13
Identities = 44/166 (26%), Positives = 79/166 (47%)
Frame = +2
Query: 194 VYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQE 373
+YD+ KQ+ A+E+++ L L+ GL RG L A E + +T L +K AI++QE
Sbjct: 1 MYDISEKQLQVALENVEKNLRKLDEHGLQRGNLSADEALLRVSTTTSLNEVMKNAIYMQE 60
Query: 374 CVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQGHCFSSGESTLLR 553
E+L+ + + ++ +D + D TI +GL +K + L
Sbjct: 61 SALEDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLF- 119
Query: 554 TPXLKLSQXPGLSLKLLRXPGKLWKRSDRQPVSLTRXIDGFVLNRI 691
P +L P S + ++ + ++PV L + + GFV+NR+
Sbjct: 120 LPLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRL 165
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 73.7 bits (173), Expect = 2e-13
Identities = 44/166 (26%), Positives = 79/166 (47%)
Frame = +2
Query: 194 VYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQE 373
+YD+ KQ+ A+E+++ L L+ GL RG L A E + +T L +K AI++QE
Sbjct: 1 MYDISEKQLQVALENVEKNLRKLDEHGLQRGNLSADEALLRVSTTTSLNEVMKNAIYMQE 60
Query: 374 CVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQGHCFSSGESTLLR 553
E+L+ + + ++ +D + D TI +GL +K + L
Sbjct: 61 SALEDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLF- 119
Query: 554 TPXLKLSQXPGLSLKLLRXPGKLWKRSDRQPVSLTRXIDGFVLNRI 691
P +L P S + ++ + ++PV L + + GFV+NR+
Sbjct: 120 LPLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRL 165
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 48.4 bits (110), Expect = 7e-06
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Frame = +2
Query: 80 STVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHT 259
ST SK + + I+G+GL+G A + A+ VTV D + A + I L
Sbjct: 14 STTAQLSKINN--VTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKR 71
Query: 260 LEN----DGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDS 427
+ D S IK ST++ +VK A V E + EN+D+K+K+F ++
Sbjct: 72 VAKKKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEV 131
Query: 428 VVDDNTIXXXXXXXXXXXXXXEGLKHKSQ 514
T+ LK KS+
Sbjct: 132 AAKPTTLITTNTSSLRLADIGLNLKDKSR 160
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +2
Query: 119 IGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK- 295
+ I G+G++G A + GY V +Y K++ +A E IK L + + ++
Sbjct: 13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEP 72
Query: 296 ------ASEQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDN 442
A Q ++ TD+ +A + A E V ENLDLK +FQ + N
Sbjct: 73 AALEEIAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQN 127
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 47.2 bits (107), Expect = 2e-05
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Frame = +2
Query: 119 IGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKA 298
+ IVGSG +G A + AS G+ V + DV K + A++ I + L +G K
Sbjct: 14 VAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTHLSKKQ--KGTDKE 71
Query: 299 SEQFQC-----IKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXX 463
F IK ++ TAV A + E EN+DLK+ +F ++ ++I
Sbjct: 72 KSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQSCKKDSILTTNT 131
Query: 464 XXXXXXXXXEGLKHKSQ 514
+GL+ K++
Sbjct: 132 SSFLLEDVAKGLQDKTR 148
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK 295
+I +VG+GL+G A + G + + D +E + Q+ T N + R ++
Sbjct: 380 EIAVVGAGLMGAGIANVTIDKGIRTVLLDANPA----GVERGQNQIATHLNKQVKRRKIN 435
Query: 296 ASEQ---FQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 448
E+ + + + D +A+K A V E V E+L LK KV + ++SVV NTI
Sbjct: 436 KLEKERIYNHLVPTIDY-SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTI 488
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK 295
+I +VG+GL+G A + G + + D +E + Q+ T N + R ++
Sbjct: 354 EIAVVGAGLMGAGIANVTIDKGIRTVLLDANPA----GVERGQNQIATHLNKQVKRRKIN 409
Query: 296 ASEQ---FQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 448
E+ + + + D +A+K A V E V E+L LK KV + ++SVV NTI
Sbjct: 410 KLEKERIYNHLVPTIDY-SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTI 462
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK 295
+I +VG+GL+G A + G + + D +E + Q+ T N + R ++
Sbjct: 380 EIAVVGAGLMGAGIANVTIDKGIRTVLLDANPA----GVERGQNQIATHLNKQVKRRKIN 435
Query: 296 ASEQ---FQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 448
E+ + + + D +A+K A V E V E+L LK KV + ++SVV NTI
Sbjct: 436 KLEKERIYNHLVPTIDY-SAMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTI 488
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +2
Query: 110 SEKIGIV--GSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLR 283
S+K+ I+ S IGRS A+L A G +VTV +++I + + +I + +N ++
Sbjct: 5 SDKVAIITGSSSGIGRSTAVLLAQEGAKVTVTGRSSEKIQETVNEIHKNGGSSDNINIVL 64
Query: 284 GELKASE-QFQCIKGS 328
G+L SE Q + IK +
Sbjct: 65 GDLNESECQDELIKST 80
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.052
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 113 EKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLH-TLENDGLLR-- 283
+ + ++G G +GR A+ F G++ + +V K A E K +L T + + R
Sbjct: 40 KSVAVIGGGTMGRGIAIAFCLSGFETYLVEVNNK----AAEFCKNELEITYKREKAFRRL 95
Query: 284 GELKASEQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 448
+ K + + ++ +TD + + + E V E++ LKK++F LD + + I
Sbjct: 96 NDSKVEKLRKNLQITTDFQ-KLNNCDLIVEAVFEDMKLKKELFTKLDKICKPSCI 149
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 31.5 bits (68), Expect = 0.84
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = +2
Query: 98 SKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDG 274
++F + + I GS IGR+ A+LFA G QVT+ A+++ + + + T ++
Sbjct: 2 TRFAGKSVIITGSSSGIGRATAVLFAKNGAQVTITGRNAEKLEATKKKLLKVVKTPDSVN 61
Query: 275 LLRGEL-KASEQFQCIK------GSTDLETAVKGAIFVQECV--PENLDLKKKVFQ-NLD 424
++ L A Q Q I+ G D+ GA V V +++DL K FQ N
Sbjct: 62 VVVANLTDAQGQDQIIQSAVKKFGKIDILINNAGANVVDGTVNTDQSIDLYHKTFQINFQ 121
Query: 425 SVVD 436
+VV+
Sbjct: 122 AVVE 125
>Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical
protein T11F9.11 protein.
Length = 307
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 86 VIMASKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDV 205
V+ + +K+ I GSG IGR A+ FA +G +V ++DV
Sbjct: 31 VLPRKSVEGKKVLITGSGSGIGRLMALEFAKLGAEVVIWDV 71
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Frame = +2
Query: 98 SKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDVVAKQITDA-IEDIKYQLHTLEND 271
++F + I I GS IGRS A++FA G QVT+ A ++ + ++ +K + + +
Sbjct: 2 ARFSGKSIIITGSSSGIGRSAAVIFAKEGAQVTITGRSADRLEETRLQILKAGVPAEKIN 61
Query: 272 GLLRGELKASEQFQCIK------GSTDLETAVKGAIFVQ--ECVPENLDLKKKVFQ-NLD 424
++ +AS Q + I+ G D+ GA+ + ++L +K F+ N
Sbjct: 62 AVVADVCEASGQDEVIRTTLAKFGKIDILVNNAGALLTDGTSNTDQAVELYQKTFKLNFQ 121
Query: 425 SVVD 436
+VV+
Sbjct: 122 AVVE 125
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 263 ENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQ-ECVPENLDLKKKVFQNL 421
++D LL + C+KGST+ TA++ +F++ C E L+ +K+VF +
Sbjct: 52 DSDDLLGSVVADHRGVFCVKGSTEEFTAIEPYVFIEHNCGYEGLN-EKRVFSKM 104
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/122 (21%), Positives = 45/122 (36%)
Frame = +2
Query: 26 GXSLRFDSRXGLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDV 205
G +FD S GT ++ + + K VG L+G L+ V ++ +YD
Sbjct: 611 GGGGQFDHSMSQSFGTFSTQTLNSMGLKKNVDQTVGLELVGIIKRCLWQPVKTKIALYDG 670
Query: 206 VAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQECVPE 385
+ + T + L + + + E K SE I + + I EC+
Sbjct: 671 ICELATQTSTMLNQFLDMILSHARMIPEWKKSEMTVSIGNIVQIVEPIPHLIQTMECLMS 730
Query: 386 NL 391
L
Sbjct: 731 EL 732
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/122 (21%), Positives = 45/122 (36%)
Frame = +2
Query: 26 GXSLRFDSRXGLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDV 205
G +FD S GT ++ + + K VG L+G L+ V ++ +YD
Sbjct: 611 GGGGQFDHSMSQSFGTFSTQTLNSMGLKKNVDQTVGLELVGIIKRCLWQPVKTKIALYDG 670
Query: 206 VAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQECVPE 385
+ + T + L + + + E K SE I + + I EC+
Sbjct: 671 ICELATQTSTMLNQFLDMILSHARMIPEWKKSEMTVSIGNIVQIVEPIPHLIQTMECLMS 730
Query: 386 NL 391
L
Sbjct: 731 EL 732
>AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical
protein F12E12.11 protein.
Length = 402
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RFLTDSLLGXSLRFDSRXGLSCGTVASTVIMASKFK----SEKIGIV--GSGLIGRSWAM 163
R ++ ++G S+ D L G A +I K S K+ +V S IGR+ A+
Sbjct: 87 RTMSSYIIGQSIIADGGSSLVMGMQAHDIIEILKHSMARFSGKVALVTGSSNGIGRAAAL 146
Query: 164 LFASVGYQVTVYDVVAKQITDAIEDI 241
LFA G +VT+ A+++ + + I
Sbjct: 147 LFAQQGAKVTITGRNAERLEETRQAI 172
>Z81500-8|CAM84816.1| 284|Caenorhabditis elegans Hypothetical
protein F11D11.14 protein.
Length = 284
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 121 RDRWKWFNREIMGDVVCL 174
RD WK F REI G VVC+
Sbjct: 131 RDGWKRFEREIDGTVVCM 148
>Z75955-3|CAB00114.1| 461|Caenorhabditis elegans Hypothetical
protein R07B7.5 protein.
Length = 461
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 119 IGIVGSGLIGRSWAMLFASVGYQVTVYD 202
+ I G+GL+G A FA G+ V+VY+
Sbjct: 4 VAIAGAGLVGALNACFFAQKGWDVSVYE 31
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 SKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQL 253
++F + + I GS IGRS A++FA G QVT + + D +E+ K Q+
Sbjct: 2 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVT----ITGRNEDRLEETKQQI 50
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 98 SKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTV 196
++F + + + GS IGR+ A+LFA G QVT+
Sbjct: 2 NRFSGKSVIVTGSSSGIGRATAVLFAKYGAQVTI 35
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 92 MASKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDVVAKQITDAIEDI 241
M S+F + + GS IGR+ A+LFA G +VTV A+++ + ++I
Sbjct: 1 MLSRFSGKVALVTGSSNGIGRAAAVLFAKDGAKVTVTGRNAERLEETRQEI 51
>U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical
protein C06E4.3 protein.
Length = 277
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 92 MASKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTV 196
M +F + I GS IGR+ A+LFA G +VTV
Sbjct: 1 MTGRFSGKVAIITGSSFGIGRATALLFAKEGAKVTV 36
>AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical
protein W03F9.9 protein.
Length = 280
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 92 MASKFKSEKIGIVGSGL-IGRSWAMLFASVGYQVTVYDVVAKQITDA 229
MA +F E + GS IGR+ A+L AS G +VT+ A+++ ++
Sbjct: 1 MAQRFTDEVAIVTGSSNGIGRATAILLASEGAKVTITGRNAERLEES 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,522,208
Number of Sequences: 27780
Number of extensions: 356992
Number of successful extensions: 842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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