Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J14
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    27   0.17 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.7  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 653 LTRXIDGFVLNRI 691
           LTR IDGFVLNRI
Sbjct: 1   LTREIDGFVLNRI 13



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 694 YAILDEVWRL 723
           YAIL+E WRL
Sbjct: 15  YAILNEAWRL 24


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 130 WKWFNREIMGDVVCLSWLS 186
           W+ F   I GD+ C  WL+
Sbjct: 125 WEVFKVWIFGDLWCSIWLA 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,601
Number of Sequences: 438
Number of extensions: 4450
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)