Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J14
(893 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase, put... 49 5e-06
At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase NAD-bi... 36 0.036
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu... 31 1.0
At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family... 31 1.0
At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family... 31 1.0
At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carot... 31 1.4
At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carot... 31 1.4
At1g56000.1 68414.m06425 amine oxidase-related contains Pfam pro... 29 4.2
At1g55980.1 68414.m06421 expressed protein 29 4.2
At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family... 29 5.5
At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family... 29 5.5
At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family... 29 5.5
At1g41650.1 68414.m04798 hypothetical protein 29 5.5
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 28 7.3
At5g66230.1 68418.m08343 expressed protein 28 9.6
At5g45150.1 68418.m05543 ribonuclease III family protein similar... 28 9.6
At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase NAD-bi... 28 9.6
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi... 28 9.6
>At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase,
putative similar to S(+)-beta-hydroxybutyryl CoA
dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase)
[Paracoccus denitrificans] GI:12003356; contains Pfam
profiles PF02737: 3-hydroxyacyl-CoA dehydrogenase NAD
binding, PF00725: 3-hydroxyacyl-CoA dehydrogenase
C-terminal
Length = 294
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/112 (26%), Positives = 57/112 (50%)
Frame = +2
Query: 113 EKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGEL 292
+ +G+VG+G +G A L A+ G V + D ++ A I + + GL+ E+
Sbjct: 5 KSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISKEV 64
Query: 293 KASEQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTI 448
+ ++ +++LE I V E + E+ D+KKK+F++LD + + I
Sbjct: 65 -GDDAMHRLRLTSNLEDLCSADIIV-EAIVESEDIKKKLFKDLDGIAKSSAI 114
>At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 334
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 41 FDSRXGLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 202
F R ++ T++S +I S + KIG +G+G++GRS GY VTV++
Sbjct: 17 FFLRRSMASSTISSDIITPS---NTKIGWIGTGVMGRSMCGHLIKAGYTVTVFN 67
>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
putative similar to cytosine-5 methyltransferase (METII)
[Arabidopsis thaliana] GI:6523846; contains Pfam
profiles PF01426: BAH domain, PF00145: C-5
cytosine-specific DNA methylase
Length = 1404
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 140 LIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG-ELKASEQFQC 316
LI R W ++ + + ++ A++ + +ED++ + E D + + E++ ++ +
Sbjct: 520 LINRIWGEFYSIYSPEDPLEEIGAEEEFEEVEDVEEEDENEEEDTIQKAIEVQKADTLKK 579
Query: 317 IKGS-TDLETAVKGAIFVQECVPENL 391
I+GS ++E +G I + C E L
Sbjct: 580 IRGSCKEMEIRWEGEILGETCAGEPL 605
>At3g02360.2 68416.m00220 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIK 244
+IG+ G ++G++ A+ A G+ ++VY+ ++ + +E K
Sbjct: 7 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK 49
>At3g02360.1 68416.m00219 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
;similar to 6-phosphogluconate dehydrogenase GB:BAA22812
GI:2529229 [Glycine max]
Length = 486
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIK 244
+IG+ G ++G++ A+ A G+ ++VY+ ++ + +E K
Sbjct: 7 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK 49
>At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYD 202
K+ I+G+GL G S A+ G++V +YD
Sbjct: 58 KVAIIGAGLAGMSTAVELLDQGHEVDIYD 86
>At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carotene
7,8-desaturase identical to SP|Q38893 Zeta-carotene
desaturase, chloroplast precursor (EC 1.14.99.30)
(Carotene 7,8-desaturase) {Arabidopsis thaliana}
Length = 558
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYD 202
K+ I+G+GL G S A+ G++V +YD
Sbjct: 58 KVAIIGAGLAGMSTAVELLDQGHEVDIYD 86
>At1g56000.1 68414.m06425 amine oxidase-related contains Pfam
profile PF01593: amine oxidase, flavin-containing
Length = 384
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 92 MASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 202
M+S + K+ ++GSG+ G A A G VT++D
Sbjct: 14 MSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 50
>At1g55980.1 68414.m06421 expressed protein
Length = 464
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 92 MASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 202
M+S + K+ ++GSG+ G A A G VT++D
Sbjct: 152 MSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 188
>At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 235
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLD 47
>At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 235
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLD 47
>At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/40 (22%), Positives = 25/40 (62%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIE 235
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++
Sbjct: 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLD 47
>At1g41650.1 68414.m04798 hypothetical protein
Length = 178
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 500 KHKSQGHCFSSGESTLLRTPXLKLSQXPG 586
+H S GH +S +ST +RT KLS G
Sbjct: 104 QHHSTGHSITSSQSTQIRTQPEKLSTREG 132
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 89 IMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLEN 268
+MAS K GI+G G +G + ++G+ VTV K+ +AIE + + + +
Sbjct: 178 LMASGLKG---GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSS 234
Query: 269 D 271
D
Sbjct: 235 D 235
>At5g66230.1 68418.m08343 expressed protein
Length = 329
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 538 IHLITYPLXEIVPAPWTKPEVAKXTREIMEEIGPP 642
IHL+T P+ + P P P+V + E+ I P
Sbjct: 120 IHLVTSPMGLLAPTPANTPQVLGFSDEVQVVITSP 154
>At5g45150.1 68418.m05543 ribonuclease III family protein similar to
CAF protein (RNA helicase/RNAseIII) [Arabidopsis
thaliana] GI:6102610; contains Pfam profiles PF00035:
Double-stranded RNA binding motif, PF00636 RNase3 domain
Length = 957
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +2
Query: 239 IKYQLHTLENDGLLRGELKASEQFQCIKGSTD-----LETAVKGAIFVQECVPENLDLKK 403
+K ++ +E ++G+ K +++ + S D LE++V + + ENLD KK
Sbjct: 874 VKIEIPNIEGTFHIKGDAKPTKK-EAENSSADHMIRALESSVMSLVITNLQMHENLDGKK 932
Query: 404 KVFQNLDSVVDDNTI 448
K Q +S+ ++ T+
Sbjct: 933 KNLQMKESLNENKTL 947
>At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 318
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVY 199
+IG +G G++G + + GY VTVY
Sbjct: 36 RIGWIGIGIMGSAMVSHIIAAGYSVTVY 63
>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein contains Pfam
profile: PF03446 NAD binding domain of
6-phosphogluconate
Length = 299
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 116 KIGIVGSGLIGRSWAMLFASVGYQVTVY 199
+IG +G G++G + + GY VTVY
Sbjct: 15 RIGWIGIGIMGSAMVSHILAAGYSVTVY 42
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,450
Number of Sequences: 28952
Number of extensions: 339950
Number of successful extensions: 919
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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