Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J13
(951 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.31
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.31
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.55
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.96
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.1
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 9.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 9.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.31
Identities = 35/133 (26%), Positives = 35/133 (26%), Gaps = 4/133 (3%)
Frame = +3
Query: 552 PNXXXPXXXLGPPPPPXXXAPXXPXFXXXXTPGHXPGXXLXPXXXPP-PXPXFXPP-PXX 725
P P P P P P P P P PP P P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP------APSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 726 XFXLXXPXXPXGX--VPXXXXPAXTXXAPXXXXPXXXXFXFFXAPXPXPPXXPXPXPXPX 899
P G VP A AP P P P P P P P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP---PVPK 1202
Query: 900 XXAXXXPXPPPPT 938
P PPP T
Sbjct: 1203 PSVGVPPVPPPST 1215
Score = 26.6 bits (56), Expect = 5.1
Identities = 31/140 (22%), Positives = 35/140 (25%), Gaps = 3/140 (2%)
Frame = +1
Query: 526 PPXXXVXGXPTXXXPXXXWAPPPPPXXXXPXPPSFXXAXPPXTXLAXIWXPXXXPXXXPX 705
PP P APP P P P A PP + P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP----- 1117
Query: 706 SXPPPXXLSXXXFPXXPXXRFXXXXXXXXXXSPPXXA---XPXXXXXXFXGXPXXXPXXX 876
S PP P P +PP A P P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 877 XXPXPXPSXXXXXXPXLXPP 936
P P P+ P + PP
Sbjct: 1178 IPPVPKPA---AGVPPVPPP 1194
Score = 26.2 bits (55), Expect = 6.8
Identities = 21/90 (23%), Positives = 23/90 (25%)
Frame = +3
Query: 552 PNXXXPXXXLGPPPPPXXXAPXXPXFXXXXTPGHXPGXXLXPXXXPPPXPXFXPPPXXXF 731
P P + P P P P P P P PP P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPP------PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 732 XLXXPXXPXGXVPXXXXPAXTXXAPXXXXP 821
P P PA + AP P
Sbjct: 1223 SAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +1
Query: 586 PPPPPXXXXPXPPSFXXAXPPXTXLAXIWXPXXXPXXXPXSXPPP 720
PPPPP P P PP + P P + PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 852 PXPXPPXXPXPXPXPXXXAXXXPXPPP 932
P P P P P P P P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 858 PXPPXXPXPXPXPXXXAXXXPXPPPP 935
P P P P P P P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 6/35 (17%)
Frame = +3
Query: 849 APXPXPPXXPX------PXPXPXXXAXXXPXPPPP 935
AP P PP P P P P P PPPP
Sbjct: 747 APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 849 APXPXPPXXPXPXPXPXXXAXXXPXPPPP 935
AP P P P P P PPPP
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.55
Identities = 30/123 (24%), Positives = 31/123 (25%), Gaps = 2/123 (1%)
Frame = +3
Query: 567 PXXXLGPPPPPXXXAPXXPXFXXXXTPGHXPGXXLXPXXXPPPXPXFXPPPXXXFXLXXP 746
P PPPPP AP P P PP P P
Sbjct: 355 PQGRSAPPPPPPRSAPST---GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG---N 408
Query: 747 XXPXGXVPXXXXPAXTXXAPXXXXPXXXXFXFFXAPX--PXPPXXPXPXPXPXXXAXXXP 920
P P+ AP P AP P PP P P P P
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 921 XPP 929
PP
Sbjct: 469 LPP 471
Score = 29.5 bits (63), Expect = 0.73
Identities = 27/104 (25%), Positives = 27/104 (25%)
Frame = +2
Query: 584 PPPPPXXPXXXXPXLFXXXNPRXPPWPXFGXPFXTPXXTPXXXPPXXXFLXXXSXGPRGX 763
P PPP P P L N P P TP P PP S P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTP----PVPTPPSLPPSAPP--------SLPPSAP 436
Query: 764 GSXPXXXXXNXXRPXPXPXPXXXLXXFXGXXXXXPXXPXPPPPP 895
S P P P P P PPP P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 6.8
Identities = 29/121 (23%), Positives = 32/121 (26%), Gaps = 3/121 (2%)
Frame = +3
Query: 585 PPPPPXXXAPXXPXFXXXXTPGHXPGXXLXPXXXPPPXPXFXPPPXXXFXLXXPXXPXGX 764
PPPPP P + P PPP PPP P P G
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLP---------PPP-----PPPRSNAAGSIPLPPQGR 358
Query: 765 VPXXXXPAXTXXAPXXXXPXXXXFXFFXAPXPXPPXXPX---PXPXPXXXAXXXPXPPPP 935
P + + P P PP P P P A PP P
Sbjct: 359 SAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 936 T 938
T
Sbjct: 419 T 419
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 0.96
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 525 SPLXXGXWXPNXXXPXXXLGPPPPPXXXAPXXPXFXXXXTPGHXPGXXLXPXXXPPPXPX 704
+P G P G P PP AP P P PG L P P P P
Sbjct: 483 APFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMAL-PPGMPAPFPG 541
Query: 705 FXPPP 719
+ P
Sbjct: 542 YPAVP 546
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 715 GGXXWGXGGGXKXGXKXXPGXXPGVXXXKKXGXXGAXXXGGGGGPXXXKG 566
GG G GGG G PG G G G GGGP +G
Sbjct: 187 GGGFGGFGGG-SGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -3
Query: 754 GXXGXXXKKXXXGGGXXWGXGGGXKXGXKXXPGXXPGVXXXKKXGXXGAXXXGGGGGPXX 575
G G + GG +G G G G G PG G G G GGGP
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGG 267
Query: 574 XKG 566
G
Sbjct: 268 HGG 270
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +3
Query: 849 APXPXPP--XXPXPXPXPXXXAXXXPXPPPP 935
AP P PP P P P A PPPP
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 553 PTXXXPXXXWAP-PPPPXXXXPXPPSFXXAXPPXTXLAXIWXPXXXPXXXPXSXPPP 720
P P AP PPPP P PPS PP P P S P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPS----APPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 864 PPXXPXPXPXPXXXAXXXPXPPPP 935
PP P P P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 864 PPXXPXPXPXPXXXAXXXPXPPPP 935
P P P P P P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/44 (27%), Positives = 16/44 (36%)
Frame = +1
Query: 583 APPPPPXXXXPXPPSFXXAXPPXTXLAXIWXPXXXPXXXPXSXP 714
A PPPP PP+ + PP + P P + P
Sbjct: 204 AQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYP 247
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 9.0
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 AXXPPXXXVXGXPTXXXPXXXWAPPPPPXXXXP----XPPSFXXAXPPXTXLAXIWXPXX 684
A PP P P PPP P P PP PP A + P
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 685 XPXXXPXSXPP 717
P P + PP
Sbjct: 187 AP-SLPSAVPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,857,480
Number of Sequences: 5004
Number of extensions: 24981
Number of successful extensions: 167
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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