Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J13
         (951 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.10 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   1.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.83
 Identities = 26/84 (30%), Positives = 26/84 (30%), Gaps = 7/84 (8%)
 Frame = +3

Query: 660 GXXLXPXXXPPPX-------PXFXPPPXXXFXLXXPXXPXGXVPXXXXPAXTXXAPXXXX 818
           G  L P   PPP        P F PPP     L  P  P         PA     P    
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNL--LRAPFFPLNPAQLRF-PAGFPNLPNAQP 581

Query: 819 PXXXXFXFFXAPXPXPPXXPXPXP 890
           P         AP P PP  P P P
Sbjct: 582 PP--------APPPPPPMGPPPSP 597



 Score = 26.2 bits (55), Expect(2) = 0.10
 Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
 Frame = +3

Query: 585 PPPPPXXXAPXXPXFXXXXT-PGHXPGXX-LXPXXXPPPXPXFXPPP 719
           PPP     AP  P        P   P      P   PPP P   PPP
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 22.2 bits (45), Expect(2) = 0.10
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 579 LGPPPPP 599
           LGPPPPP
Sbjct: 528 LGPPPPP 534


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = -1

Query: 720 WGGXXXGVXXGVXXGXPNXGQGGXRGXXXXKRXGXXXXGXXGGGG 586
           +GG   G   G   G    G+GG RG     R G    G  GGGG
Sbjct: 57  YGGGDDGYGGGGRGG--RGGRGGGRGRGRG-RGGRDGGGGFGGGG 98



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = -1

Query: 702 GVXXGVXXGXPNXGQGGXRGXXXXKRXGXXXXGXXGGGG 586
           G   G   G    G+GG  G    +  G    G  GGGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGG 93


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 647 GGXAXXKXGGXGXXXXGGGGGA 582
           GG      GG G    GGGGG+
Sbjct: 661 GGGGSVGSGGIGSSSLGGGGGS 682


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +2

Query: 518 PGXPLXXGSXXSQXXKXLXXXGPPPPPXXPXXXXP 622
           PG P   GS   +    L   GPP P   P    P
Sbjct: 83  PGAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGP 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,658
Number of Sequences: 2352
Number of extensions: 8955
Number of successful extensions: 58
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)