Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J12
(979 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 43 8e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 7e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.020
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.027
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.027
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.035
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.43
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.43
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.75
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.0
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 42.7 bits (96), Expect = 8e-05
Identities = 33/89 (37%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGG-GXKGXFXGKXGXGGVKGGXXXXPRXGGXPXPXXGXXXXG 759
GG G GGG GG GG G G F G+ G GG GG P G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG------FGGGPGGFEG--GPG 238
Query: 758 GXGXXPXXPXXGXGGXGFXXXXXGGXXGG 672
G G P G GG G GG GG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 32.7 bits (71), Expect = 0.081
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGGXXXXPRXGGXP 789
GG G GG GG GGG G G G GG GG P G P
Sbjct: 224 GGFGGGPGGFEGGPG-GFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/98 (26%), Positives = 28/98 (28%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGXXXXP 825
PP PPP PP P PP PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 826 PXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSPPV 939
TPP P P P PP PP P P +PP+
Sbjct: 414 --TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Score = 39.1 bits (87), Expect = 0.001
Identities = 31/108 (28%), Positives = 32/108 (29%), Gaps = 6/108 (5%)
Frame = +1
Query: 646 PPXXPPXXP---PPXXPPXXXXXX---PXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXR 807
PP PP P P PP P P P P P P G P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP--- 444
Query: 808 GXXXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSPPVFSXA 951
PP P P P P PP P P P + PV S A
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIA 492
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/107 (26%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Frame = +2
Query: 659 PPXRPPXXXPPXXXTXXXSPXFPXGEXXGLXLYPPPXXXPXXGXXXPPXGGXXXT--PPX 832
PP PP P T P PPP PP G T PP
Sbjct: 361 PPPPPPRSAPS---TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 833 PXPXXPXPXTXPXXPPRXKQXXPXAPPPGXRXPXXFFRXPPXXSXGP 973
P P P P PP P P P PP + P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 36.7 bits (81), Expect = 0.005
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Frame = +1
Query: 673 PPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXP-PXRGXXXXPPXTPPXPX 849
PP PP PP P PP P P +G PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP--PPPRS 368
Query: 850 XPXNXPXXPP---PXKTXXPPXPPPXXP 924
P PP PP PPP P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = +1
Query: 715 PPXPXWGXXGXXPXP-PXXXXPXXGXGXPPXRGXXXXPPXTPPXPXXPXNXPXXPPPXKT 891
PP P P P P PP G PP +PP P P + P T
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS--MNPAINST 287
Query: 892 XXPPXPPP 915
PP PPP
Sbjct: 288 SKPPLPPP 295
Score = 34.3 bits (75), Expect = 0.027
Identities = 25/101 (24%), Positives = 27/101 (26%), Gaps = 8/101 (7%)
Frame = +1
Query: 658 PPXXPPPXX--------PPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGX 813
PP PPP PP P PP G P P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSPP 936
P PP P + P PP P +PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 33.9 bits (74), Expect = 0.035
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +2
Query: 668 RPPXXXPPXXXTXXXSPXFPXGEXXGLXLYPPPXXXPXXGXXXPPXGGXXXTPPXPXPXX 847
RPP PP P L PPP G P G + P P P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG--RSAPPPPPPR 367
Query: 848 PXPXTXPXXPPRXKQ---XXPXAPPP 916
P T PP P APPP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 32.3 bits (70), Expect = 0.11
Identities = 31/120 (25%), Positives = 36/120 (30%), Gaps = 17/120 (14%)
Frame = +1
Query: 670 PPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGXXXXP-PXTPPXP 846
PPP PP P P P PP P G PP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
Query: 847 XXPXNXPXXPP---PXKTXXPPXP-------------PPXXPXSPPVFSXAXXXXXXAXP 978
+ P PP +T PP P PP P S P+ + A + P
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 758 PPPXXXPXXGXXXPPXGGXXXTPPXPXPXXPXPXTXPXXPPRXKQXXPXAPPPGXRXPXX 937
PPP PP G P P P P Q PPP R
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 938 FFRXPPXXS 964
R PP S
Sbjct: 372 TGRQPPPLS 380
Score = 31.5 bits (68), Expect = 0.19
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGXXXXP 825
PP P PP P P P P G P P P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP--PRPIAPVSMNPAINSTSKP 290
Query: 826 PXTPPXPXXPXNXPXXPPPXKTXXPPXPPP 915
P PP K PP PPP
Sbjct: 291 PLPPPSSRV---SAAALAANKKRPPPPPPP 317
Score = 29.9 bits (64), Expect = 0.57
Identities = 19/73 (26%), Positives = 21/73 (28%)
Frame = +2
Query: 632 TPRVXPPXXPPXRPPXXXPPXXXTXXXSPXFPXGEXXGLXLYPPPXXXPXXGXXXPPXGG 811
TP PP PP PP P +P P + PP PP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP----PSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 812 XXXTPPXPXPXXP 850
P P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 29.9 bits (64), Expect = 0.57
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = +1
Query: 634 PXCXPPXXPPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGX 813
P PP PP PP P PP P P P P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP-----SAPIAP--PLPAGMPAAPPLPPA 472
Query: 814 XXXPPXTP-PXPXXP 855
PP P P P P
Sbjct: 473 APAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/110 (20%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = +3
Query: 588 PPNSDVAXPXXTIX-IPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSPXGXXXXXSXTPX 764
PP+ + P + + PP PPP PP P+ P S S P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 765 XXXXXXGXXXPPPPGXXXXPPLXPXXXXLXRKXXLXXPPGXNXFXPXPPP 914
PP P K + + P PPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.6 bits (56), Expect = 5.3
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +3
Query: 633 PXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSPXGXXXXXSXTPXXXXXXXGXXXPPP-PG 809
P V P PP APP P P P +P S P G PP P
Sbjct: 415 PPVPTPPSLPPSAPPSL--PPSAPPSLPMGAPAAPPLPPS-APIAPPLPAGMPAAPPLPP 471
Query: 810 XXXXPPLXP 836
PP P
Sbjct: 472 AAPAPPPAP 480
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 7e-04
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +1
Query: 658 PPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGX-GXPPX-RGXXXXPPX 831
PP P PP PP P P P P G PP + PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 832 T------PPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSPP 936
PP P P PPP + P P P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 38.7 bits (86), Expect = 0.001
Identities = 28/100 (28%), Positives = 29/100 (29%), Gaps = 8/100 (8%)
Frame = +1
Query: 658 PPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGX--GXPPX----RGXXX 819
PP P PP PP P P P P G PP G
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 820 XPPXT--PPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSP 933
PP + PP P P PPP P P P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 35.5 bits (78), Expect = 0.011
Identities = 28/95 (29%), Positives = 28/95 (29%), Gaps = 1/95 (1%)
Frame = +1
Query: 634 PXCXPPXXPPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGX 813
P PP P P P P P P G P P G PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVPPPSEAPPVPKPSVGVPP---- 1209
Query: 814 XXXPPXT-PPXPXXPXNXPXXPPPXKTXXPPXPPP 915
PP T PP P P P P PP P P
Sbjct: 1210 -VPPPSTAPPVPTPSAGLPPVPVP-TAKAPPVPAP 1242
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 561 PLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPP-XAPPXXXPPXXXPKXXPPXSP 728
P + PP+ P ++ +P V PP PP P PP P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 32.3 bits (70), Expect = 0.11
Identities = 25/116 (21%), Positives = 31/116 (26%), Gaps = 1/116 (0%)
Frame = +3
Query: 612 PXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSPXGXXXXXSXTPXXXXXXXGXX 791
P + P + P PP P PP P +P S P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 792 XPPPPGXXXXPPLXPXXXXLXRKXXLXXP-PGXNXFXPXPPPXVXXFPXXFFXGXP 956
P P G P + + P P + P P P V P G P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 30.7 bits (66), Expect = 0.33
Identities = 27/116 (23%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Frame = +3
Query: 591 PNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSPXGXXXXXSXTPXXX 770
P++ P + IP + P PP P PP P P P S
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP-----KPSVAVPPV 1114
Query: 771 XXXXGXXXPPPPGXXXXPPLXPXXXXLXRKXXLXXP--PGXNXFXPXPPPXVXXFP 932
G P P P P K + P P + P P P V P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 546 SIGSAPLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPP-XAPPXXXPPXXXPKXXPP 719
S+ + P+ + PP P +P V PP PP P PP P PP
Sbjct: 1165 SVAAPPVPAPSSGIPP-----VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 3.0
Identities = 20/77 (25%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Frame = +3
Query: 546 SIGSAPLXSIXKXXP-PNSDVAXPXXTIXIPXVXPPXXP----PPXAPPXXXPPXXXPKX 710
S+ + P+ + P P VA P + P P PP PP PP P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 711 XPPXSPXGXXXXXSXTP 761
P P TP
Sbjct: 1206 GVPPVPPPSTAPPVPTP 1222
Score = 26.2 bits (55), Expect = 7.0
Identities = 25/115 (21%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Frame = +3
Query: 546 SIGSAPLXSIXKXXPPNSDVAXPXXTIXIPX---VXPPXXPPPXAPPXXXPPXXXPKXXP 716
S+ + P+ PP V P +P PP P APP P P
Sbjct: 1098 SVAAPPVPKPSVAVPP---VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 717 PXSPXGXXXXXSXTPXXXXXXXGXXXPPPPGXXXXPPLXPXXXXLXRKXXLXXPP 881
P P G P P P P K + PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 25.8 bits (54), Expect = 9.3
Identities = 28/125 (22%), Positives = 30/125 (24%), Gaps = 3/125 (2%)
Frame = +3
Query: 549 IGSAPLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSP 728
I P S+ P VA P + P PP P A P P P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPP--VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA 1148
Query: 729 XGXXXXXSXTPXXXXXXXGXXXPPPPGXXXXPPLXPXXXXLXRKXXLXXPPGXN---XFX 899
S P P P P P PP
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 900 PXPPP 914
P PPP
Sbjct: 1209 PVPPP 1213
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGG 822
GG G GG GG+ GGG G G+ G GG +GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 33.1 bits (72), Expect = 0.061
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGG--GXKGXFXGKXGX-GGVKGG 822
GG G GGG GG GG G +G G G GG KGG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 32.7 bits (71), Expect = 0.081
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -3
Query: 938 TGGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGGXXXXPRXG 798
T G G GG GG+ GG +G F G G GG +GG R G
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGG--RGGFGG--GRGGARGGGRGGARGG 46
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGG 822
GG G GG GG+ GG G+ G G +GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -2
Query: 951 GXRKNXXGXRXP-GGGAXGXXCFXRGGXXGXVXGXGXXGXGXGG 823
G R G R GGG G RGG G G G G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.020
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 658 PPXXPPPXXPPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXG 792
P P P PP P PP P G G P PP P G
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 826 PXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXP 924
P PP P P PPP P PPP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.75
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +2
Query: 734 EXXGLXLYPPPXXXPXXGXXXPPXGGXXXTPPXPXPXXPXPXTXPXXPPRXKQXXPXAPP 913
E L L PP P P PP P P P P PP P PP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPP 779
Query: 914 P 916
P
Sbjct: 780 P 780
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +1
Query: 751 PXPPXXXXPXXGXG---XPPXRGXXXXPPXTPPXPXXPXNXPXXPPP 882
P PP P PP PP PP P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Frame = +1
Query: 823 PPXTPPXPXXPXNXP---XXPPPXKTXXPPXPPPXXP 924
PP PP P P PPP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 4/52 (7%)
Frame = +1
Query: 796 PPXRGXXXXPPXTPPXPXXP----XNXPXXPPPXKTXXPPXPPPXXPXSPPV 939
PP P P P P P PPP PPP P P V
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/52 (26%), Positives = 15/52 (28%)
Frame = +3
Query: 573 IXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSP 728
+ K PP P PP P PP PP PP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.027
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +1
Query: 775 PXXGXGXPPXRGXXXXPP----XTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXS 930
P PP R PP TPP P P PP P PPP P S
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 823 PPXTPPXPXXPX-NXPXXPPPXKTXXPPXPPPXXPXSPP 936
PP P P + P PPP + PP P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/65 (26%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +1
Query: 742 GXXPXPPXXXXPXXGXGXPPXRGXXXXPPXTPPXPXXPXNXPXXPP-PXKTXXPPXPPPX 918
G P P P P + PP P P + P P P PP P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 919 XPXSP 933
P P
Sbjct: 1740 APSVP 1744
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/60 (26%), Positives = 21/60 (35%)
Frame = +3
Query: 549 IGSAPLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXSP 728
+ + P+ P S P + +P PP PP A P PP P P P
Sbjct: 1687 VSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +2
Query: 758 PPPXXXPXXGXXXPPXGGXXXTPPXPXPXXPXPXTXPXXPPRXKQXXPXAPPPGXR 925
P P PP PP P P PP P P PG R
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 561 PLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXP 704
P S PP V P +P PP PPP P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.027
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +1
Query: 775 PXXGXGXPPXRGXXXXPPXTPPXPXXPXNXPXXPPPXKTXXPP----XPPPXXPXSP 933
P P + P PP P P P PP + PP PPP P +P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 33.5 bits (73), Expect = 0.046
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +1
Query: 709 PXPPXPXWGXXGXXPXPPXXXXPXXGXGX-PPXRGXXXXPPXTPPXPXXPXNXPXXPPPX 885
P PP P PP P PP P + P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA-APVKSPPS 186
Query: 886 KTXXPPXPPPXXPXSPP 936
P PP P PP
Sbjct: 187 APSLPSAVPPMPPKVPP 203
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 835 PPXPXXPXNXPXXPPPXKTXXPPXP---PPXXPXSPPVFSXAXXXXXXAXP 978
PP P P PP + PP P PP +PP+ S A P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 29.5 bits (63), Expect = 0.75
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = +1
Query: 658 PPXXPPPXXPPXXXXXXPX-PPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGXXXXPPXT 834
PP P P P PP P P P P PP PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPS------IPPPSPASAPPIPSKAPPIPSSLP-PPAQ 176
Query: 835 PPXPXX-PXNXPXXPPPXKTXXPPXPPPXXPXSP 933
P P P + P P P PPP +P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +2
Query: 758 PPPXXXPXXGXXXPPXGGXXXTPPXPXPXXPXPXTXPXXPPRXKQXXPXAPPP 916
P P P PP P P P + P P P PPP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 5.3
Identities = 25/96 (26%), Positives = 29/96 (30%), Gaps = 1/96 (1%)
Frame = +3
Query: 546 SIGSAPLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPPXXXPKXXPPXS 725
S SA S P S++ P P + PP P APP P PP +
Sbjct: 118 SSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPP--SPASAPPIPSKAPPIPSSLPPPA 175
Query: 726 -PXGXXXXXSXTPXXXXXXXGXXXPPPPGXXXXPPL 830
P P PP P PPL
Sbjct: 176 QPAAPVKSPPSAPSLP-----SAVPPMPPKVPPPPL 206
Score = 26.2 bits (55), Expect = 7.0
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = +3
Query: 555 SAPLXSIXKXXPPNSDVAXPXXTIXIPXVXPPXXPPPXAPPXXXPP--XXXPKXXPPXSP 728
SAP P S P IP PP P A P PP P PP P
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP--PAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 729 XGXXXXXSXTPXXXXXXXGXXXPPPPG 809
S P PP G
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAG 226
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 853 PXNXPXXPPPXKTXXPPXPPPXXPXSPP 936
P + P P P PP P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP 151
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 33.9 bits (74), Expect = 0.035
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -3
Query: 935 GGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGGXXXXPRXG 798
GG G GG G GGG +G F G GG +GG R G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGG-GSRGGSRGGFRGGSRGG 189
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -3
Query: 932 GEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGGXXXXPRXG 798
G G GG GG GG +G F G GG GG R G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGG-GSRGGFGGGSRGGSRGG 181
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 935 GGEXGXXGGGX-GGKXVXXGGGXKGXFXGK 849
GG G GGG GG GG +G F G+
Sbjct: 164 GGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.43
Identities = 25/100 (25%), Positives = 25/100 (25%), Gaps = 4/100 (4%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPX---PPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGX 813
PP P PP P PP P G P PP P PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSP 933
PP P PP PPP P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 30.3 bits (65), Expect = 0.43
Identities = 25/100 (25%), Positives = 25/100 (25%), Gaps = 4/100 (4%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPX---PPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGX 813
PP P PP P PP P G P PP P PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSP 933
PP P PP PPP P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 30.3 bits (65), Expect = 0.43
Identities = 25/100 (25%), Positives = 25/100 (25%), Gaps = 4/100 (4%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPX---PPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGX 813
PP P PP P PP P G P PP P PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSP 933
PP P PP PPP P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 29.5 bits (63), Expect = 0.75
Identities = 30/145 (20%), Positives = 37/145 (25%), Gaps = 1/145 (0%)
Frame = +2
Query: 542 FFHRLRPPXQHXQNXXXQFRCGXXPXDYXXTPRVXPPXXPPXRPPXXXPPXXXTXXXSPX 721
FF RP + +F P ++ P + PP P P
Sbjct: 179 FFDDERPKHHEFDDEDREFPAHHEPGEHMPPPPMHHKPGEHMPPP---PMHHEPGEHMPP 235
Query: 722 FPXGEXXGLXLYPPPXXX-PXXGXXXPPXGGXXXTPPXPXPXXPXPXTXPXXPPRXKQXX 898
P G + PPP P PP P P P PP +
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Query: 899 PXAPPPGXRXPXXFFRXPPXXSXGP 973
PPP PP P
Sbjct: 296 EHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/97 (23%), Positives = 23/97 (23%), Gaps = 1/97 (1%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPXPPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGXXXX 822
P P P P PP P G P PP P PP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 257
Query: 823 PPXTPPXPXXPXNXPXXPPPXKTXXPPXPPPXXPXSP 933
PP P PP PPP P
Sbjct: 258 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 29.5 bits (63), Expect = 0.75
Identities = 24/94 (25%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPX---PPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGX 813
PP P PP P PP P G P PP P PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPP 915
PP P PP PPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Score = 26.2 bits (55), Expect = 7.0
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 4/85 (4%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPX---PPXPXWGXXGXX-PXPPXXXXPXXGXGXPPXRGX 813
PP P PP P PP P G P PP P PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 319
Query: 814 XXXPPXTPPXPXXPXNXPXXPPPXK 888
PP P PPP K
Sbjct: 320 PGEHMPPPPMHHEPGEH-MPPPPFK 343
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 645 PPXXPPPXAPPXXXPPXXXPKXXPPXSPXGXXXXXSXTPXXXXXXXGXXXPPPPGXXXXP 824
PP P A P PP P PP S + PPPP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQS-TNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 825 PLXP 836
P P
Sbjct: 283 PRPP 286
Score = 25.8 bits (54), Expect = 9.3
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 2/92 (2%)
Frame = +1
Query: 646 PPXXPPXXPPPXX--PPXXXXXXPXPPXPXWGXXGXXPXPPXXXXPXXGXGXPPXRGXXX 819
P PP P P P PP P P G P
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSS-GRAVSPEIPPTY 227
Query: 820 XPPXTPPXPXXPXNXPXXPPPXKTXXPPXPPP 915
P P P P P PP T P P
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 645 PPXXPPPXAPPXXXPPXXXPKXXPP 719
PP PPP PP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 1.00
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 645 PPXXPPPXAPPXXXPPXXXPKXXPP 719
P PPP PP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 853 PXNXPXXPPPXKTXXPPXPPPXXP 924
P N P PPP P PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 823 PPXTPPXPXXPXNXPXXPPPXKTXXPPXPPP 915
PP PP P P P PP + PP PPP
Sbjct: 5 PPGNPPPPPPP---PGFEPPSQ---PPPPPP 29
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 853 PXNXPXXPPPXKTXXPPXPPPXXPXSPP 936
P P PPP PP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP--PPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPXPPXP 726
PP PP PPP P P PP P
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 657 PPPXAPPXXXPPXXXPKXXPPXSP 728
PP PP PP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 646 PPXXPPXXPPPXXPPXXXXXXPXPP 720
P PP PPP P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -2
Query: 924 RXPGGGAXGXXCFX-RGGXXGXVXGXGXXGXGXGGVXXXPPXGGXXXPXXG 775
R GG G F RGG G G G G GG P G P G
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRGSVAPFSG 494
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 941 KTGGEXGXXGGGXGGKXVXXGGGXKGXFXGKXGXGGVKGG 822
+TGG GG GG+ G G G G+ G GG + G
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGR-GRGGARSG 482
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,994,117
Number of Sequences: 5004
Number of extensions: 55290
Number of successful extensions: 544
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 503290872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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