Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J05
         (956 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    31   1.8  
AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p pro...    31   2.3  
BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    30   5.4  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    30   5.4  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    30   5.4  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    30   5.4  
AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    29   7.1  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    29   7.1  
AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodom...    29   9.4  

>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 597  WRNSAWTPTSGLL*PNSFETIPPAERRVFLSRSHTPE--PVAVIPDLPPICLFISIAAS 427
            ++++A +P S     N F +IP AE  VF   +  P     A  PD PP  LF S A S
Sbjct: 1374 FQSAAKSPVSSA---NIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAIS 1429


>AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p protein.
          Length = 1711

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -3

Query: 552  NSFETIPPAERRVFLSRSHTPE--PVAVIPDLPPICLFISIAAS 427
            N F +IP AE  VF   +  P     A  PD PP  LF S A S
Sbjct: 1386 NIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAIS 1429


>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 338 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 472
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 338 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 472
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 462 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 506


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 338 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 472
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 423


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 338 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 472
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 91  MNSKLLYFFATVLVCVNAE-VYWEYEEGYPISGHFSKRHPRDVTWDKQVG 237
           MNS L+    + L  V A  + W  E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 91  MNSKLLYFFATVLVCVNAE-VYWEYEEGYPISGHFSKRHPRDVTWDKQVG 237
           MNS L+    + L  V A  + W  E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodomain
           transcriptionfactor protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 338 PGRPTAPGSWDLQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 472
           P  P +P SW     STN     + AN N+  + + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSRSHNNNNSSGGGSG 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,816,468
Number of Sequences: 53049
Number of extensions: 810264
Number of successful extensions: 2208
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)