Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J05
(956 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 3.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 5.4
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 9.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 9.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 9.4
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.4 bits (48), Expect = 3.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 215 SPGTNKWEEGRSSARWAKTMMGFLVKPV 298
S GTN W+ GR + + ++ LV V
Sbjct: 264 SGGTNHWDSGRRKSAAQRNVIRMLVAVV 291
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 3.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 228 TSGRREGLRHAGPKR 272
T GR GLR+ GPK+
Sbjct: 421 TYGRNAGLRYRGPKQ 435
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 5.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 19 STHYG-NSLRF*HSCLKQRNLSQVKMNSKL 105
ST+ G N RF CL+ + S K+NS+L
Sbjct: 62 STNIGINKWRFLLQCLEDLDCSLRKLNSRL 91
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 126 PIYCGNFPSRP 136
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 569 PVFCDRIPSRP 537
P++C PSRP
Sbjct: 129 PIYCGNFPSRP 139
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 519 ASQPAVWSRRNSVTEDRTSASRQSSAMIGDP 611
A +PA WS R + +T S + +P
Sbjct: 327 AGRPAFWSLRKAFARKKTDYSSFGKILATEP 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,909
Number of Sequences: 438
Number of extensions: 5318
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31444140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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