Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_J04
         (942 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p pro...    32   0.99 
AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6 pr...    32   0.99 
AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white ...    32   0.99 
AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA ...    32   0.99 
AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA...    32   1.3  

>AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p
           protein.
          Length = 592

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 246 QCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 344
           QCS C ++ R + S   ++R  A  KP  C QC
Sbjct: 362 QCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQC 394


>AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6
           protein.
          Length = 591

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 246 QCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 344
           QCS C ++ R + S   ++R  A  KP  C QC
Sbjct: 361 QCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQC 393


>AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white 5
           protein.
          Length = 591

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 246 QCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 344
           QCS C ++ R + S   ++R  A  KP  C QC
Sbjct: 361 QCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQC 393


>AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA
           protein.
          Length = 592

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 246 QCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 344
           QCS C ++ R + S   ++R  A  KP  C QC
Sbjct: 362 QCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQC 394


>AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA
           protein.
          Length = 381

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = -3

Query: 241 LDTAIAVPGQLVALYVLSGAVLAVALKVGWMNLWHEA*AKNSTRTELNTK 92
           +DT  A PG+  AL+ ++   +AV L +G +++WH   AK  TR E + +
Sbjct: 261 VDTDAASPGRRRALWFMAFTNVAVVLALGSLSIWH---AKLITRGETSVE 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,333,007
Number of Sequences: 53049
Number of extensions: 754336
Number of successful extensions: 2354
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)