Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J03
(925 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 2e-58
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 2e-34
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 143 2e-34
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 143 2e-34
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 129 3e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 74 1e-13
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 51 2e-06
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 51 2e-06
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 38 0.011
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 37 0.020
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.061
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.57
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 32 0.75
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 1.3
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 29 4.0
SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7) 29 7.0
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 7.0
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 9.3
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 223 bits (545), Expect = 2e-58
Identities = 111/150 (74%), Positives = 115/150 (76%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 445
IQKESTLHLV NY+TP LAVL++YKVDENGKI RLRRE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRE 120
Query: 446 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVF 535
C E CGAGVFMA DR YCGKC T VF
Sbjct: 121 CPSESCGAGVFMASHFDRQYCGKCCLTYVF 150
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 143 bits (346), Expect = 2e-34
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/69 (57%), Positives = 53/69 (76%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 266 IQKESTLHL 292
I++ S LHL
Sbjct: 136 IKQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 129 bits (312), Expect = 3e-30
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 266 IQK 274
IQK
Sbjct: 139 IQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 191 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 295
IPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 44 PFPCGMVDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPNQQRL 214
P C +++ V M I KTL +T +E+ +T+ +K KI+ K+ P +L
Sbjct: 53 PSICDKDTNIKSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKL 112
Query: 215 IFAGKQLEDGRTLSDYNIQKES 280
I+AGK L D L +YNI ++S
Sbjct: 113 IYAGKILNDDNPLKEYNIDEKS 134
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 50.8 bits (116), Expect = 2e-06
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 268
I V TLTG+ I + + P TI VK I+ K G P +QQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 269 QKESTLHLV 295
+TLHL+
Sbjct: 133 FAGATLHLI 141
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDY 262
M++ V G TL+V +EN +A ++ + G+P ++ L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 263 NIQKESTLHLV 295
++++ + +V
Sbjct: 61 SVKENDVILMV 71
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.015
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 37.1 bits (82), Expect = 0.020
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 89 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
Q+F T TL +D + +K++I+ K GIP + QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 266 IQK 274
+++
Sbjct: 67 LKQ 69
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.061
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQ+ VKTL +T T V +EGIP +QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +2
Query: 77 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 256
R+++ + +G L++ + TIE ++ ++ DK G PP QR I K + +L
Sbjct: 33 RLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLL 92
Query: 257 DYNIQK 274
+++
Sbjct: 93 QCKVRE 98
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 32.3 bits (70), Expect = 0.57
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 188 GIPPNQQRLIFAGKQLEDGRTLSDYN 265
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 95 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 274
FV G+ ITL P + ++ + G P ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 275 ESTLHL 292
+TL +
Sbjct: 229 GATLQI 234
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 1.00
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 149 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 292
T+ ++K + +K G+ + RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
+ ++T G T+ +E+ ++E++KA+ + + GIP RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 272 KEST 283
+++T
Sbjct: 245 QKAT 248
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 139 AVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWTYPLGLQY 267
+ Y +E E + RQR +S E D+C K R+T Y
Sbjct: 39 STEYTQESEGLDERQRARGKKSFECDICGKCFSRFTITTKYNY 81
>SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7)
Length = 706
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -1
Query: 112 REGLYENLHLHSPYAVN-HTTRKR 44
REGL ++ HLH+ ++ HTTR+R
Sbjct: 495 REGLTDSAHLHATHSTQLHTTRER 518
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 98 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR---TLSDYNI 268
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 269 QKESTLHLV 295
+T+ L+
Sbjct: 120 PPYATISLI 128
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 413 ENGKIHRLRRECTGEQC 463
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,796,980
Number of Sequences: 59808
Number of extensions: 367954
Number of successful extensions: 967
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2681370225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -