Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J03
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 140 2e-33
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 140 2e-33
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 140 2e-33
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 140 2e-33
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 140 2e-33
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 130 1e-30
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 130 1e-30
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 2e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 1e-13
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 46 4e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 5e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.006
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.031
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 36 0.054
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.054
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.054
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.29
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.38
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 3.6
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.7
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 4.7
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 6.2
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 137 bits (332), Expect = 9e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 226
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 821 IQKESTLHLV 830
Score = 137 bits (332), Expect = 9e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 745 IQKESTLHLV 754
Score = 138 bits (335), Expect = 4e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 266 IQKESTLHLV 295
IQK+STLHLV
Sbjct: 821 IQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 140 bits (338), Expect = 2e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 130 bits (315), Expect = 1e-30
Identities = 66/147 (44%), Positives = 90/147 (61%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 272 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 451
E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 452 GEQCGAGVFMAVMEDRHYCGKCHSTMV 532
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 130 bits (315), Expect = 1e-30
Identities = 66/147 (44%), Positives = 90/147 (61%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 272 KESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECT 451
E+T+++ Y+TP LAVL++YK+DENGKI RLR+EC
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQ 116
Query: 452 GEQCGAGVFMAVMEDRHYCGKCHSTMV 532
CG GVFMA +RHYCG+CH T+V
Sbjct: 117 QPSCGGGVFMAQHANRHYCGRCHDTLV 143
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 266 IQKESTLHLV 295
+ S LHLV
Sbjct: 61 VLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +2
Query: 83 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 262
K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 263 NIQKESTLHLV 295
NI+ E +HLV
Sbjct: 220 NIRDEDIIHLV 230
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 107 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 286
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 287 HL 292
L
Sbjct: 152 RL 153
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 68 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 193
SV M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 53 SVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 1e-13
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 196
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 57.2 bits (132), Expect = 2e-08
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +2
Query: 83 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 262
+ QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 263 NIQKESTL 286
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLS 256
++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 257 DYNIQKESTLHL 292
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 262
M + +KT TGK IT+E S VK +++DK+G+ G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 263 NIQK 274
IQ+
Sbjct: 56 KIQE 59
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +2
Query: 83 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 262
K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +Y
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
Query: 263 NIQKESTLHL 292
NI ST+ L
Sbjct: 97 NISNNSTMDL 106
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +2
Query: 110 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 289
+G L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 290 L 292
L
Sbjct: 241 L 241
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 229
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 128 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 292
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 128 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 286
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 53 CGMVDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAG 226
C +++ V + + +TLT LE+ TI VKA + ++G P Q+LI+ G
Sbjct: 42 CSFINNQMMV-LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNG 100
Query: 227 KQLED 241
K L+D
Sbjct: 101 KILDD 105
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 116 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 286
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.5 bits (78), Expect = 0.054
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 62 VDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
V++ +V ++ G+ ++ +++E +K KI+ + GIP + L GK L D
Sbjct: 135 VETCTKVVDLCIAVSMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYD 194
Query: 242 GRTLSDY 262
+ L+DY
Sbjct: 195 DKKLADY 201
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.054
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +2
Query: 107 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 286
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 287 HL 292
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.054
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +2
Query: 107 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 286
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 287 HL 292
+L
Sbjct: 644 YL 645
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 107 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 286
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 266 IQKESTLHLV 295
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 266 IQKESTLHLV 295
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 262
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 263 NIQK 274
IQ+
Sbjct: 56 KIQE 59
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 299 STPGGGWIPSGYCSPRGYVHLPAAFQQ 219
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 98 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 196
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
+Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,466,235
Number of Sequences: 27780
Number of extensions: 266108
Number of successful extensions: 781
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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