Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J03
(925 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 208 3e-54
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 206 1e-53
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 206 2e-53
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 137 8e-33
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 137 8e-33
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 137 8e-33
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 137 8e-33
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 137 8e-33
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 137 8e-33
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 137 8e-33
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 137 8e-33
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 137 8e-33
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 137 8e-33
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 137 8e-33
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 137 8e-33
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 137 8e-33
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 137 8e-33
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 137 8e-33
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 137 8e-33
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 137 8e-33
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 136 2e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 136 3e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 130 2e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 111 6e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 85 6e-17
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 2e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 65 7e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 62 4e-10
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 55 8e-08
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 53 2e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 4e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 2e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 3e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 48 7e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 7e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 7e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 7e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 7e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 1e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 2e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 4e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 45 6e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 1e-04
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 1e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 1e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 1e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 44 2e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 3e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 41 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 0.002
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.002
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.003
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.003
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.004
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.005
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.016
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.016
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.088
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.12
At1g11970.1 68414.m01383 hypothetical protein 34 0.12
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.27
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.82
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.82
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 2.5
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 2.5
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 2.5
At5g12280.1 68418.m01444 hypothetical protein 29 3.3
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 4.4
At1g47680.1 68414.m05297 hypothetical protein 29 4.4
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 28 7.6
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 208 bits (509), Expect = 3e-54
Identities = 102/155 (65%), Positives = 113/155 (72%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 445
IQKESTLHLV Y+ P LAVL+FYKVD +GK+ RL++E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 446 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 550
C CG G FMA DRHYCGKC +T VFK D+
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 206 bits (504), Expect = 1e-53
Identities = 101/153 (66%), Positives = 112/153 (73%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 445
IQKESTLHLV Y+ P LAVL+FYKVD +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 446 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 544
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 206 bits (503), Expect = 2e-53
Identities = 100/153 (65%), Positives = 112/153 (73%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 445
IQKESTLHLV Y+ P LAVL+FYK+D +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 446 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 544
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 165 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 311
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 165 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 311
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 165 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 311
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 165 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 311
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 187
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +3
Query: 165 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 311
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 91.9 bits (218), Expect = 5e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 272 KESTLHLV 295
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 134 bits (324), Expect = 8e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 212 IQKESTLHLV 221
Score = 130 bits (314), Expect = 1e-30
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 136 IQKESTLHLV 145
Score = 99.1 bits (236), Expect = 4e-21
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 244
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 137 bits (332), Expect = 8e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 272 KESTLHLV 295
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 136 bits (329), Expect = 2e-32
Identities = 65/70 (92%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 131 bits (317), Expect = 6e-31
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 122 bits (293), Expect = 4e-28
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 266 IQKESTLHLV 295
+Q++STLHL+
Sbjct: 61 VQEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 136 bits (328), Expect = 3e-32
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 129 bits (311), Expect = 3e-30
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 215 IQKESTLHLV 224
Score = 120 bits (289), Expect = 1e-27
Identities = 61/71 (85%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDY 262
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 263 NIQKESTLHLV 295
NIQKESTLHLV
Sbjct: 291 NIQKESTLHLV 301
Score = 105 bits (251), Expect = 5e-23
Identities = 51/71 (71%), Positives = 60/71 (84%)
Frame = +2
Query: 80 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 259
+ MQI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 260 YNIQKESTLHL 292
Y+IQK+S LHL
Sbjct: 61 YSIQKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 130 bits (313), Expect = 2e-30
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 117 bits (282), Expect = 1e-26
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 266 IQKESTLHLV 295
IQKESTLHLV
Sbjct: 63 IQKESTLHLV 72
Score = 107 bits (257), Expect = 1e-23
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = +2
Query: 71 VRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 250
++R MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG T
Sbjct: 547 LQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVT 606
Query: 251 LSDYNIQKESTLHLV 295
L DY+I K+STL+LV
Sbjct: 607 LGDYDIHKKSTLYLV 621
Score = 107 bits (256), Expect = 1e-23
Identities = 56/75 (74%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = +2
Query: 77 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 250
R MQIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 251 LSDYNIQKESTLHLV 295
L+DY+IQKESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390
Score = 101 bits (243), Expect = 5e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
MQIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 266 IQKESTLHL 292
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Frame = +2
Query: 77 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
R M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294
Query: 242 GRTLSDYNIQKESTLHLV 295
GRTL+ YNIQK STL+LV
Sbjct: 295 GRTLAHYNIQKGSTLYLV 312
Score = 89.0 bits (211), Expect = 4e-18
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 7/76 (9%)
Frame = +2
Query: 86 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 244
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 245 RTLSDYNIQKESTLHL 292
RTL+DY I+ STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Frame = +2
Query: 86 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 244
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 245 RTLSDYNIQKESTLH 289
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 111 bits (267), Expect = 6e-25
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +2
Query: 74 RRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTL 253
R M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL
Sbjct: 82 RHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTL 141
Query: 254 SDYNIQKESTLHLV 295
+DYNIQ +S LHL+
Sbjct: 142 ADYNIQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 85.0 bits (201), Expect = 6e-17
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 266 IQKESTLHLV 295
+++ S LHLV
Sbjct: 61 LERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 229
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +2
Query: 80 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 259
V M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 260 YNIQKESTL 286
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVK 166
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 64.9 bits (151), Expect = 7e-11
Identities = 28/70 (40%), Positives = 46/70 (65%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 266 IQKESTLHLV 295
++ TLHL+
Sbjct: 84 LENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/82 (36%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 53 CGMVDSVRRVKMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 229
C + ++QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GK
Sbjct: 84 CSSSNRPESTRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGK 143
Query: 230 QLEDGRTLSDYNIQKESTLHLV 295
QL+ +L+ Y+I+++++L LV
Sbjct: 144 QLQRENSLTYYSIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 54.8 bits (126), Expect = 8e-08
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSD 259
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 260 YNIQKES 280
N+ + S
Sbjct: 61 NNVVENS 67
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +2
Query: 80 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 259
V + + V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 260 YNIQKESTLHLV 295
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +2
Query: 98 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 277
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 278 STLHLV 295
T+H+V
Sbjct: 82 HTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M +++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 266 IQKESTLHL 292
I ES L L
Sbjct: 61 ILFESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 257 DYNIQKES 280
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 257 DYNIQKES 280
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 266 IQKESTLHLV 295
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 257 DYNIQKESTL 286
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 257 DYNIQKESTL 286
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 257 DYNIQKESTL 286
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLS 256
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 257 DYNIQKESTL 286
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M + + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 266 IQKESTL 286
I ES L
Sbjct: 61 ILFESLL 67
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDY 262
++I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 263 NIQKESTLHLV 295
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M++ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 266 IQKESTLHL 292
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 77 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 253
R M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 254 SDYNIQKESTLHLV 295
+ N+Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 262
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 263 NIQKESTLHLV 295
Q ++T++LV
Sbjct: 67 --QPDATVNLV 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 272 KESTLHLV 295
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 271
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 272 KESTLHLV 295
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
M +F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 266 IQKESTLHL 292
I S + L
Sbjct: 61 ILNHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 68 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDG 244
+++ M+I + L GK L V +++ ++KAK K + ++ + GK+LED
Sbjct: 494 AIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDE 553
Query: 245 RTLSDYNIQKESTLHLV 295
++L++ N+Q S +HL+
Sbjct: 554 KSLAEQNVQPNSLVHLL 570
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLS 256
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 257 DYNIQKESTLHL 292
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 113 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 292
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 293 V 295
+
Sbjct: 604 M 604
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 256
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 257 DYNIQKESTLHLV 295
+ +S + ++
Sbjct: 61 ANKVFDKSVIAII 73
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 262
+Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 263 NIQKESTLHLV 295
Q ++T++LV
Sbjct: 67 --QSDTTMNLV 75
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 266 IQKESTLHL 292
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 262
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 263 NIQKESTLHLV 295
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 265
+ + ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 266 IQKESTLHL 292
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 199
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVK 166
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
M +F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 226
M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 86 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 226
M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.088
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 128 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 83 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 250
+ ++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 56 GMVDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 196
G + R + ++ + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 33 GKREIAERQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 65 DSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 241
DS + + V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 72 DSNTEDLISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 128 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 286
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 92 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 265
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 266 IQKESTLHLV 295
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 295 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 176
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +2
Query: 143 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 259
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 143 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 268
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 116 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 268
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 274 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 176
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 137 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 292
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 508 REVSQHDGLQRRRQINKSPLACKKRSRLLLXMMDFK 615
R + HDG R+R +N+ K R LL D+K
Sbjct: 481 RPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYK 516
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,010
Number of Sequences: 28952
Number of extensions: 254017
Number of successful extensions: 831
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2197951248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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