Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J02
(1254 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 41 0.002
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.006
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.039
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.090
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 31 1.5
SB_40892| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 31 1.5
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 3.3
SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034) 30 3.4
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 30 3.4
SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 30 3.4
SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07) 29 5.9
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.9
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 29 7.8
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 41.1 bits (92), Expect = 0.002
Identities = 39/129 (30%), Positives = 42/129 (32%), Gaps = 4/129 (3%)
Frame = -3
Query: 1042 VXLXXXMGRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARX-RGXQEDXGXSAX 866
V L +G G G+ GG G A G G GA G G A
Sbjct: 31 VLLGVVVGHGGATGGHGGATGGGGGATGGGATGGGGGATGGGGGATGGHGGATGGGGGAT 90
Query: 865 GXXXGGGGXEXGXDSAGXGGAA---XXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGX 695
G GGG G + G GG A GA VGA G G GG G
Sbjct: 91 GD--GGGATGGGGGATGGGGGATGGHGGATGGGVGATGGHGGATGGHGGATGGHGGATGG 148
Query: 694 XGCPXGGXG 668
G GG G
Sbjct: 149 GGGATGGGG 157
Score = 35.9 bits (79), Expect = 0.068
Identities = 29/108 (26%), Positives = 30/108 (27%)
Frame = -3
Query: 991 GSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGX 812
G+ GG G G G G G G GGGG G A
Sbjct: 60 GATGGGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATG 119
Query: 811 GGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
GG G G G G G GG G G GG G
Sbjct: 120 GGVGATGGHGGATGGHGGATGGHGGATGGG---GGATGGGGGATGGGG 164
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 39.5 bits (88), Expect = 0.006
Identities = 37/127 (29%), Positives = 38/127 (29%), Gaps = 4/127 (3%)
Frame = -3
Query: 1018 RXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGX 839
R R G G+ GG G G G G G G GGGG
Sbjct: 236 RSNGRLGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGA 295
Query: 838 EXGXDSA--GXGGA--AXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGX 671
G A G GGA GA GA G V G GG G G GG
Sbjct: 296 TGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGG 355
Query: 670 GXMXEXG 650
G G
Sbjct: 356 GGPGSGG 362
Score = 33.1 bits (72), Expect = 0.48
Identities = 31/132 (23%), Positives = 33/132 (25%)
Frame = -3
Query: 1132 WXXGXXXMAEGXXXRXGGKXPMXXGDAXQGVXLXXXMGRXXXRXGXRGSXNXLGGXXXGX 953
W G + R GG G G G G G+ GG G
Sbjct: 226 WIGGSRLSNDRSNGRLGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGG 285
Query: 952 AXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXV 773
G G G G G GGGG G A GG G
Sbjct: 286 GGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVT 345
Query: 772 GA*XGXVAGVEG 737
G G G G
Sbjct: 346 GGGGGATGGGGG 357
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G+ GG G G G G G G GGGG G
Sbjct: 291 GGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGG 350
Query: 820 A-GXGGAAXXGAC 785
A G GG G C
Sbjct: 351 ATGGGGGPGSGGC 363
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 36.7 bits (81), Expect = 0.039
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -3
Query: 1021 GRXXXRXGXRGSXNXLGGXXX--GXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGG 848
GR R G N GG G G E W G G G G G GG
Sbjct: 128 GRGGWRGRGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGG 187
Query: 847 GGXEXGXDSAGXG 809
G G D G G
Sbjct: 188 GSRGGGGDGRGRG 200
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 36.3 bits (80), Expect = 0.051
Identities = 26/79 (32%), Positives = 27/79 (34%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G D G G GGGG G + G GAA
Sbjct: 36 GGGVGGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGGGAGNGGGGG--GAGNGGAAGAAGA 93
Query: 793 GACXXXVGA*XGXVAGVEG 737
GA G G V G G
Sbjct: 94 GAGGNVGGGGSGGVGGNGG 112
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 35.5 bits (78), Expect = 0.090
Identities = 25/84 (29%), Positives = 25/84 (29%)
Frame = -3
Query: 988 SXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXG 809
S GG G G G G G G G GGGG G G G
Sbjct: 1754 STGGFGGGGGGGGMGGGGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMAGGGGGMGGG 1813
Query: 808 GAAXXGACXXXVGA*XGXVAGVEG 737
G G A G AG EG
Sbjct: 1814 GGGMGGGGEGMGAAGGGMGAGGEG 1837
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/87 (31%), Positives = 28/87 (32%)
Frame = -3
Query: 910 ARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXN 731
A R G GGGG G AG GG G + A G G EG
Sbjct: 1744 ASGRQMSSSSSTGGFGGGGGGGGMGGGGGMAGGGGGMGGGG----MAAGGGEFGGGEGMG 1799
Query: 730 XTXLELGGXVGXXGCPXGGXGXMXEXG 650
GG G G GG G M G
Sbjct: 1800 G-----GGMAGGGGGMGGGGGGMGGGG 1821
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = -3
Query: 898 GXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXL 719
G D G G GGGG G G GG G G G G G +
Sbjct: 771 GGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGY 830
Query: 718 ELGGXVGXXGCPXGGXGXMXEXGRXG 641
GG G G G G G G
Sbjct: 831 GDGGGFGDGGGYADGDGGGGGGGGGG 856
Score = 30.7 bits (66), Expect = 2.5
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXG-GGGXEXGXD 824
G G GG G G G G G D G G G GGG G
Sbjct: 788 GGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDG 847
Query: 823 SAGXGGAAXXGACXXXVGA*XGXVAGVEG 737
G GG G G G G G
Sbjct: 848 GGGGGGGGGGGGGGGGGGGGGGGGGGGGG 876
Score = 29.1 bits (62), Expect = 7.8
Identities = 30/109 (27%), Positives = 30/109 (27%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G D G G GGGG G D
Sbjct: 771 GGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGD-GDGGGGGGGGGGG--GGGDG 827
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGG 674
G G G G G G GG G G GG
Sbjct: 828 GGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 876
>SB_40892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G +D G A G GGG + G D+AG GG+ G
Sbjct: 20 GDDAGGGGGSDDDGYDAGG---GGGSYDDGYDAAGGGGSDDDG 59
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G D G A G GGG + G D+AG GG+ G
Sbjct: 33 GYDAGGGGGSYDDGYDAAG---GGGSDDDGYDAAGGGGSDHDG 72
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G +D G A G GGG + G D+ G GG+ G
Sbjct: 124 GYDAVGDGGSDDDGYDAAG---GGGSDDDGDDAGGGGGSDHDG 163
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G + G A G GGG + G D+AG GG+ G
Sbjct: 59 GYDAAGGGGSDHDGDDAAG---GGGSDDDGYDAAGGGGSDHDG 98
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G + G A G GGG + G D+AG GG+ G
Sbjct: 85 GYDAAGGGGSDHDGYDAGG---GGGSDDDGYDAAGGGGSDHDG 124
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G A G +D G A G GGG G D+ G GG+ G
Sbjct: 98 GYDAGGGGGSDDDGYDAAG---GGGSDHDGYDAVGDGGSDDDG 137
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 31.5 bits (68), Expect = 1.5
Identities = 27/98 (27%), Positives = 28/98 (28%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G R RG G G GGG G
Sbjct: 131 GYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRG--RGGGGYGGGGYGGGGYGGGGHGG 188
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGG 707
G GG G G+ G G G GG
Sbjct: 189 GGYGGGGYGGGGGGYGGSGYGGGGGYGGGGYGGGRSGG 226
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +3
Query: 642 PXLPXSXMXPKPPXGXPXXPTXPPNSKXVXXHPSTPATXP 761
P P P PP P P PP P P P
Sbjct: 95 PPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPP 134
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 18/82 (21%), Positives = 22/82 (26%), Gaps = 2/82 (2%)
Frame = +3
Query: 864 PXADXPXSSWXPRXRAPXPA--HXXSXPXXXAXPXSXPPSXFXLPRXPXRXXXRPXSXQS 1037
P P + + P AP P + P P + PP P P P
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPP 190
Query: 1038 XTPCXASPXXXGXFPPXRXXXP 1103
P P PP P
Sbjct: 191 PNPPYPPPPNAPNPPPPNPPYP 212
>SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034)
Length = 472
Score = 30.3 bits (65), Expect = 3.4
Identities = 23/80 (28%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Frame = -3
Query: 1021 GRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGG 842
G + G G G G G G G G G S+ G GGGG
Sbjct: 115 GEAGGQAGGGGQAGGQAGSQAGGGAAGGGGQEGGGQGGAQAGGSTS-GSSSGGATSGGGG 173
Query: 841 --XEXGXDSAGXGGAAXXGA 788
G AG G +A GA
Sbjct: 174 VSGSSGTSIAGGGSSAGAGA 193
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 30.3 bits (65), Expect = 3.4
Identities = 35/105 (33%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Frame = -2
Query: 941 WRXGXVGWXGRTXAXXPGGPXAIXXGXXXG--GGGXRXRGXLXGXGR---GGVXRGM-XR 780
W G G GR PGG G G GG RG G GR GG+ RG
Sbjct: 24 WGRGQGGGMGR----GPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGGMGRGPGGG 79
Query: 779 XGXGLXXXC-RXRRGMXXDXFGVGXXCRXXGXSXGWLXXHGRAGQ 648
G G R + G G G CR G GW +GR G+
Sbjct: 80 LGRGPGGGWGRMQEGGMGRGPGQGWGCR--GMGCGWGCGNGRFGE 122
>SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 3.4
Identities = 39/145 (26%), Positives = 44/145 (30%)
Frame = -3
Query: 1084 GGKXPMXXGDAXQGVXLXXXMGRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGAR 905
GG+ G G + + G R GG G G AG G
Sbjct: 236 GGQGGTSSGGGGYGGETYACLSSTYGKGGDRNQPGNAGGGA-GEGSTGGPGGINAGGGGG 294
Query: 904 XRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXT 725
D G A G GGGG G S G GGAA G C G G + G
Sbjct: 295 DSTTDSDDG--AGG---GGGG---GHFSGGAGGAAATG-CTNQYGGSGGIASSTIG---- 341
Query: 724 XLELGGXVGXXGCPXGGXGXMXEXG 650
G G C G G + G
Sbjct: 342 --ACAGGGGSSNCQAGNGGNSCQRG 364
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGA 788
G G G G G GGGG G G GGA GA
Sbjct: 664 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGA 707
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 889 EDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEG 737
+D G G GGGG G G GG G G G G G
Sbjct: 654 DDYGDGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGG 704
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XG 758
G G G G G GGGG G G GG G GA G
Sbjct: 657 GDGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAGAG 710
>SB_4609| Best HMM Match : EGF (HMM E-Value=8.9e-07)
Length = 287
Score = 29.5 bits (63), Expect = 5.9
Identities = 25/86 (29%), Positives = 29/86 (33%)
Frame = -3
Query: 925 WAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAG 746
W G A D S G GGG G S GG+ G G V G
Sbjct: 198 WPGGTAGNGATTADSNVSGGG---GGGFYTDGQGSRNKGGSGGEGGKAFL----HGGVGG 250
Query: 745 VEGXNXTXLELGGXVGXXGCPXGGXG 668
+ + + GG G GC GG G
Sbjct: 251 RQFSSNSYGGFGGGGGACGCNGGGAG 276
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.5 bits (63), Expect = 5.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 639 APXLPXSXMXPKPPXGXPXXPTXPP 713
AP +P + P PP G P P PP
Sbjct: 178 APAVPLAAASPPPPSGGPPPPPPPP 202
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 898 GXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXG 791
G ED G S G GGG AG GG + G
Sbjct: 231 GGSEDNGASGGGGGYSGGGSGTHSGQAGGGGGSYCG 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,817,539
Number of Sequences: 59808
Number of extensions: 94990
Number of successful extensions: 849
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3928595805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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