Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_J02
(1254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 38 0.015
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 38 0.020
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.026
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.026
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.060
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 35 0.14
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 35 0.14
Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.98
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.98
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.98
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 2.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 3.0
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 5.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 29 9.1
AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical... 29 9.1
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 37.9 bits (84), Expect = 0.015
Identities = 31/111 (27%), Positives = 31/111 (27%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G A G GGGG G
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGC 133
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G GG G G G G G G G GC GG G
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 33.1 bits (72), Expect = 0.42
Identities = 29/111 (26%), Positives = 29/111 (26%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G A G G G G G GGGG G
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G GG G G G G G GC GG G
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G A G GGGG G G GG
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGC 85
Query: 793 GACXXXVGA*XGXVAGVEG 737
G G G G G
Sbjct: 86 GGGGGGCGGGGGGCGGGGG 104
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 37.5 bits (83), Expect = 0.020
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G + GG G G W G G G G G GGGG G
Sbjct: 56 GRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Query: 820 AGXGGAAXXG 791
G GG G
Sbjct: 116 GGGGGRGGGG 125
Score = 29.5 bits (63), Expect = 5.2
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = -2
Query: 1028 GXGTGXXAXXXAWEXEXTGWLXXXXXRXVWRXGXVGWXGRTXAXXPGGPXAIXXGXXXGG 849
G G G W G W G G G GG G GG
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNW--GGNGGGGNGGGGRGGGGGG--GGGRGGG 107
Query: 848 GGXRXRGXLXGXGRGGVXRGMXRXGXG 768
GG R G G GRGG G G G
Sbjct: 108 GGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -2
Query: 950 RXVWRXGXVGWXGRTXAXXPGGPXAIXXGXXXGGG--GXRXRGXLXGXGRGGVXRGMXRX 777
R W G GW GG G GGG G G G GRGG G
Sbjct: 45 RPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Query: 776 GXG 768
G G
Sbjct: 105 GGG 107
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 37.1 bits (82), Expect = 0.026
Identities = 33/111 (29%), Positives = 34/111 (30%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G G G GGGG G S
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G GG + G C G G G G GG G P GG G
Sbjct: 145 GGCGGGS-SGGCG---GGGGGGCGGGGGGGCGGGSSGGG-GYAVAPSGGGG 190
Score = 36.7 bits (81), Expect = 0.034
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G G G GGGG G G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 793 GACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G G G G G GG G G GG G
Sbjct: 140 GG-GSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 36.7 bits (81), Expect = 0.034
Identities = 30/120 (25%), Positives = 33/120 (27%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G G G GG G S
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS 151
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
+G G G C G G + G GG G G GG + G G
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
Score = 35.9 bits (79), Expect = 0.060
Identities = 32/111 (28%), Positives = 33/111 (29%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G G GGGG G G GG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG-- 121
Query: 793 GACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
G C G G G G + GG G GC GG G G G
Sbjct: 122 GGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG--GCGGGGGGGCGGGGGGG 170
Score = 29.5 bits (63), Expect = 5.2
Identities = 32/122 (26%), Positives = 32/122 (26%), Gaps = 2/122 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG A G G G G GGGG G
Sbjct: 37 GCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Query: 820 AGXGG--AAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGR 647
G GG G C G G G G GG G G GG G G
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGGGGGC-GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGC 155
Query: 646 XG 641
G
Sbjct: 156 GG 157
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXG-XD 824
G G GG G A ++ G+ G G G GGGG G
Sbjct: 229 GGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAG 288
Query: 823 SAGXGGAAXXGA 788
S+G GG + A
Sbjct: 289 SSGGGGYSAPAA 300
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 37.1 bits (82), Expect = 0.026
Identities = 33/111 (29%), Positives = 34/111 (30%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G G G GGGG G S
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G GG + G C G G G G GG G P GG G
Sbjct: 145 GGCGGGS-SGGCG---GGGGGGCGGGGGGGCGGGSSGGG-GYAVAPSGGGG 190
Score = 36.7 bits (81), Expect = 0.034
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G G G GGGG G G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 793 GACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G G G G G GG G G GG G
Sbjct: 140 GG-GSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 36.7 bits (81), Expect = 0.034
Identities = 30/120 (25%), Positives = 33/120 (27%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G G G G G G G GG G S
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS 151
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
+G G G C G G + G GG G G GG + G G
Sbjct: 152 SGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
Score = 35.9 bits (79), Expect = 0.060
Identities = 32/111 (28%), Positives = 33/111 (29%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXX 794
GG G G G G G G GGGG G G GG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG-- 121
Query: 793 GACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
G C G G G G + GG G GC GG G G G
Sbjct: 122 GGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG--GCGGGGGGGCGGGGGGG 170
Score = 29.5 bits (63), Expect = 5.2
Identities = 32/122 (26%), Positives = 32/122 (26%), Gaps = 2/122 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG A G G G G GGGG G
Sbjct: 37 GCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Query: 820 AGXGG--AAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGR 647
G GG G C G G G G GG G G GG G G
Sbjct: 97 CGGGGGCGGGGGGCGGGGGGCGGGGGGC-GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGC 155
Query: 646 XG 641
G
Sbjct: 156 GG 157
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXG-XD 824
G G GG G A ++ G+ G G G GGGG G
Sbjct: 229 GGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAG 288
Query: 823 SAGXGGAAXXGA 788
S+G GG + A
Sbjct: 289 SSGGGGYSAPAA 300
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.060
Identities = 33/124 (26%), Positives = 36/124 (29%), Gaps = 4/124 (3%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXG-ARXRGXQEDXGXSAXGXXXGGGGXEXGXD 824
G G GG G G + G G G G G GGGG G
Sbjct: 107 GGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYG 166
Query: 823 SAGXGGAAXXGACXXXVGA---*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEX 653
G GG G G G + G G GG +G G GG G
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPS 226
Query: 652 GRXG 641
G G
Sbjct: 227 GGYG 230
Score = 31.9 bits (69), Expect = 0.98
Identities = 33/116 (28%), Positives = 34/116 (29%)
Frame = -3
Query: 1024 MGRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGG 845
MG G G GG G G G G G G G GGG
Sbjct: 149 MGGYGGGGGGGGDFGGYGGGGMGGGGYGG-----GGDGGYGGGGFGGGGMGGYGGGMGGG 203
Query: 844 GXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXG 677
G G G GG G G G G G +GG G GCP G
Sbjct: 204 GYGGG----GMGGGGYGGGGDGGYGP-SGGYGGGYGPGG-GYGMGGGGGGGGCPNG 253
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/91 (27%), Positives = 29/91 (31%)
Frame = -3
Query: 940 GXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*X 761
G W G A G G G GG G G GG+ GA G+
Sbjct: 33 GSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGS-- 90
Query: 760 GXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G G +G + G G G GG G
Sbjct: 91 GGWGGQDGGSSAGGWGGSQGGSQGGSSGGWG 121
Score = 28.7 bits (61), Expect = 9.1
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Frame = -3
Query: 919 GXGARXRGXQEDXGXS-AXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGV 743
G G + G G + G GGGG G GG+ G+ G G G
Sbjct: 134 GWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGN 193
Query: 742 EGXNXTXLELGGXVGXXGCPXGGXG 668
+G GG G G GG G
Sbjct: 194 QGGG------GGRGGNQGGEQGGWG 212
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 34.7 bits (76), Expect = 0.14
Identities = 35/128 (27%), Positives = 36/128 (28%)
Frame = -3
Query: 1021 GRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGG 842
GR R G N GG G G W G G RG GG
Sbjct: 58 GRGGGRGGGDWGGNNGGGGNWGG--NGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNW 115
Query: 841 XEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXM 662
G + G GG G G G G G N G G G GG G
Sbjct: 116 GGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGG----GDWGGNGGGGRGGGGGR 171
Query: 661 XEXGRXGA 638
G GA
Sbjct: 172 GGGGGGGA 179
Score = 30.3 bits (65), Expect = 3.0
Identities = 36/156 (23%), Positives = 39/156 (25%)
Frame = -3
Query: 1225 GRXGXSWWXEXGVXRVGXXXXRXXGRXXXXXWXXGXXXMAEGXXXRXGGKXPMXXGDAXQ 1046
G G W G G R G G G GG G +
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGR 101
Query: 1045 GVXLXXXMGRXXXRXGXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAX 866
G G G + GG G G G G RG G
Sbjct: 102 GDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGG----GGRGGDGRGPPGSNGGGDW 157
Query: 865 GXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XG 758
G GGG G G GG A +GA G
Sbjct: 158 GGNGGGGRGGGGGRGGGGGGGAGERIAEGVLGALLG 193
>Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical
protein F13A7.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/71 (28%), Positives = 25/71 (35%)
Frame = -3
Query: 880 GXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXV 701
G + G GGGG G +AG GGA+ A G V + + V
Sbjct: 138 GSAVQGAGGGGGGASAGGGAAGAGGASQMTAAQGSAAQGAGGGGAVSQISAAPGSMAQGV 197
Query: 700 GXXGCPXGGXG 668
G G G G
Sbjct: 198 GAPGSAAQGGG 208
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 31.9 bits (69), Expect = 0.98
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 893 PGGPXAIXXGXXXGGGGXRXRGXLXGXGRGGV-XRGMXRXGXGL 765
PGGP G GG R + G GRGG +GM G GL
Sbjct: 172 PGGPGGRRMGPGGRGGDSREGPMMGGMGRGGFGGQGMGGMGAGL 215
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.98
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGG 806
GG G G W G G + G G GGGG G G GG
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.5 bits (68), Expect = 1.3
Identities = 29/113 (25%), Positives = 34/113 (30%), Gaps = 2/113 (1%)
Frame = -3
Query: 973 GGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGX--EXGXDSAGXGGAA 800
GG G G G G G + S G GGGG G GG
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGG 117
Query: 799 XXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
G +G G + + G GG G G GG G + G G
Sbjct: 118 GGGFNFNDIG---GLINSMGGGGGGGQRQGGGGGGFGDILGGIGSLIGGGGGG 167
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/95 (25%), Positives = 29/95 (30%)
Frame = -3
Query: 925 WAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAG 746
+ G G G G GGGG G GG G +G G +
Sbjct: 51 FGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIG---GLINS 107
Query: 745 VEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRXG 641
+ G GG G G GG G + G G
Sbjct: 108 MGGGGGGGQRQGGGGGGFGDILGGIGSLIGGGGGG 142
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Frame = -3
Query: 880 GXSAXGXXXGGGGXEXGXDSAGXGG--AAXXGACXXXVGA*XGXVAGVEGXNXTXLELGG 707
G A GGGG G G GG G G G G G ++GG
Sbjct: 44 GGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGG 103
Query: 706 XVGXXGCPXGGXGXMXEXGRXG 641
+ G GG G + G G
Sbjct: 104 LINSMG--GGGGGGQRQGGGGG 123
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 2.3
Identities = 31/111 (27%), Positives = 34/111 (30%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXEXGXDS 821
G G GG G + G +G A G G S G GGG G +
Sbjct: 321 GGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGA--GGYSGGGGGGGGGAAAGGGYN 378
Query: 820 AGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
AG GG A A G N GG G G GG G
Sbjct: 379 AGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGG---GGGAGGGGGYAGGAG 426
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 30.3 bits (65), Expect = 3.0
Identities = 29/114 (25%), Positives = 33/114 (28%), Gaps = 3/114 (2%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGX---SAXGXXXGGGGXEXG 830
G GS GG G + G G+ G + G + G GGG G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
Query: 829 XDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXG 668
G GGA GA G AG N G G G G
Sbjct: 841 GAGDGNGGAGAGNG--NGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAG 892
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical protein
F07C4.7 protein.
Length = 180
Score = 30.3 bits (65), Expect = 3.0
Identities = 31/121 (25%), Positives = 33/121 (27%), Gaps = 1/121 (0%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGX-EXGXD 824
G RG G G G W G G G G G GG + G
Sbjct: 38 GPRGPGEWNNGGGRGG---FGGNNGWNNGGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGL 94
Query: 823 SAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGCPXGGXGXMXEXGRX 644
G GG G G G G + GG G G GG G G
Sbjct: 95 RGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGR 154
Query: 643 G 641
G
Sbjct: 155 G 155
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 880 GXSAXGXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA 767
G A G GGGG G + G GG G C +GA
Sbjct: 91 GSYAAGGAGGGGGG--GYATGGGGGGGGGGCCSCGIGA 126
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 651 PXSXMXPKPPXGXPXXPTXPPNSKXVXXHPSTPATXPX*APT 776
P S + P PP P P P ++ + PS P AP+
Sbjct: 821 PLSTLPPPPPPNPPPAPQPPSSAASLTPAPSAAQNAPSIAPS 862
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical protein
C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = -3
Query: 1000 GXRGSXNXLGGXXXGXAXXXGXEXXWAGXGARXRGXQEDXGXSAXGXXXGGGGXE-XGXD 824
G R GG G + G R G + G G GGGG + G D
Sbjct: 167 GDRRGGGSSGGGRFGGGGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGD 226
Query: 823 SAGXGG 806
G GG
Sbjct: 227 RYGGGG 232
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 865 GXXXGGGGXEXGXDSAGXGGAAXXGACXXXVGA*XGXVAGVEGXNXTXLELGGXVGXXGC 686
G GGGG G G GG G G G G G GG G
Sbjct: 87 GGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASA 146
Query: 685 P 683
P
Sbjct: 147 P 147
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 866 GXXXGGGGXRXRGXLXGXGRGGVXRGMXRXGXG 768
G GGGG + G GRGG RG G G
Sbjct: 78 GGGGGGGGNQNNYGNRGRGRGGFDRGRGGGGGG 110
>AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical
protein Y48C3A.14 protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -2
Query: 854 GGGGXRXRGXLXGXGRGGVXRGMXR 780
GGGG R RG G GRGG RG R
Sbjct: 832 GGGGGRGRG---GRGRGGRGRGRGR 853
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,452,906
Number of Sequences: 27780
Number of extensions: 76712
Number of successful extensions: 803
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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