Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I24
         (964 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   4.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   8.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   8.2  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +2

Query: 881 PPXPXPXPXPPXPSTXXSHPXXPXPPP 961
           PP P P P P    T  S P      P
Sbjct: 392 PPEPVPTPEPQPTQTTESEPTQASEQP 418


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 303 SKLYSLEILVWVKAVF 350
           + LYSL +L+W+   F
Sbjct: 248 NSLYSLHLLLWITVTF 263


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 391 IYHRCGICNKKY 426
           + H+C +C+KK+
Sbjct: 193 VLHQCPVCHKKF 204


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 863 PXRPPXPPXPXPXPXPP 913
           P  P  PP P P   PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,839
Number of Sequences: 336
Number of extensions: 4158
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27202879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)