Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I22
(919 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58485| Best HMM Match : COX2 (HMM E-Value=0) 169 2e-42
SB_14168| Best HMM Match : COX2 (HMM E-Value=0) 169 2e-42
SB_12233| Best HMM Match : COX2 (HMM E-Value=0) 124 1e-28
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 42 7e-04
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 34 0.14
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 31 0.99
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 0.99
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 31 1.7
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 3.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 3.0
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_42645| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 29 4.0
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 9.2
>SB_58485| Best HMM Match : COX2 (HMM E-Value=0)
Length = 239
Score = 169 bits (412), Expect = 2e-42
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
Frame = +1
Query: 211 RFLLEGQIIELI*TIIPAFTLIFIAXXXXXXXXXXXXXXXXXITLKSIGHQ*Y*RYEYSD 390
R+L++G ++E+I TIIPA LIFIA +T+K++GHQ Y YEYSD
Sbjct: 61 RYLVDGTLLEVIWTIIPAIILIFIAFPSLKLLYLMDEVMDPALTIKAVGHQWYWSYEYSD 120
Query: 391 FNN--IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGV 564
+ + +EFDSY++P+ ++ +FRLL+VD TA DVIHS +P+L V
Sbjct: 121 YQSETLEFDSYMVPTTDLNQGDFRLLEVDNRLVVPINTHVRVLITAADVIHSFAVPALAV 180
Query: 565 KVDANPGRLNQTNFFINRPXIFFGXCSQICGANHSFIPXVLEXISIXNXI 714
K+DA PGRLNQT FFI RP +F+G CS+ICGANHSF+P V+E +S+ I
Sbjct: 181 KMDAVPGRLNQTGFFIKRPGVFYGQCSEICGANHSFMPIVIEAVSLDKYI 230
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 72 LNLQNGASPLIEQIIFFHD 128
L+LQ+ A P++E+IIFFHD
Sbjct: 15 LSLQDAAHPVMEEIIFFHD 33
>SB_14168| Best HMM Match : COX2 (HMM E-Value=0)
Length = 239
Score = 169 bits (412), Expect = 2e-42
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
Frame = +1
Query: 211 RFLLEGQIIELI*TIIPAFTLIFIAXXXXXXXXXXXXXXXXXITLKSIGHQ*Y*RYEYSD 390
R+L++G ++E+I TIIPA LIFIA +T+K++GHQ Y YEYSD
Sbjct: 61 RYLVDGTLLEVIWTIIPAIILIFIAFPSLKLLYLMDEVMDPALTIKAVGHQWYWSYEYSD 120
Query: 391 FNN--IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGV 564
+ + +EFDSY++P+ ++ +FRLL+VD TA DVIHS +P+L V
Sbjct: 121 YQSETLEFDSYMVPTTDLNQGDFRLLEVDNRLVVPINTHVRVLITAADVIHSFAVPALAV 180
Query: 565 KVDANPGRLNQTNFFINRPXIFFGXCSQICGANHSFIPXVLEXISIXNXI 714
K+DA PGRLNQT FFI RP +F+G CS+ICGANHSF+P V+E +S+ I
Sbjct: 181 KMDAVPGRLNQTGFFIKRPGVFYGQCSEICGANHSFMPIVIEAVSLDKYI 230
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 72 LNLQNGASPLIEQIIFFHD 128
L+LQ+ A P++E+IIFFHD
Sbjct: 15 LSLQDAAHPVMEEIIFFHD 33
>SB_12233| Best HMM Match : COX2 (HMM E-Value=0)
Length = 219
Score = 124 bits (298), Expect = 1e-28
Identities = 62/142 (43%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +1
Query: 211 RFLLEGQIIELI*TIIPAFTLIFIAXXXXXXXXXXXXXXXXXITLKSIGHQ*Y*RYEYSD 390
R+L++G ++E+I TIIPA LIFIA +T+K++GHQ Y YEYSD
Sbjct: 61 RYLVDGTLLEVIWTIIPAIILIFIAFPSLKLLYLMDEVMDPALTIKAVGHQWYWSYEYSD 120
Query: 391 FNN--IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGV 564
+ + +EFDSY++P+ ++ +FRLL+VD TA DVIHS +P+L V
Sbjct: 121 YQSETLEFDSYMVPTTDLNQGDFRLLEVDNRLVVPINTHVRVLITAADVIHSFAVPALAV 180
Query: 565 KVDANPGRLNQTNFFINRPXIF 630
K+DA PGRLNQT FFI + F
Sbjct: 181 KMDAVPGRLNQTGFFIKKTWSF 202
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 72 LNLQNGASPLIEQIIFFHD 128
L+LQ+ A P++E+IIFFHD
Sbjct: 15 LSLQDAAHPVMEEIIFFHD 33
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PPP P PP P P PA PPPP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPPXXR 908
P P P P P P PPP P PP P P P PPPP R
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALR 435
Score = 38.3 bits (85), Expect = 0.009
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +3
Query: 720 NXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
N P P P P P P PPP P PP P P P P PP
Sbjct: 362 NMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 36.7 bits (81), Expect = 0.026
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PPP P PP P P P PPP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 36.7 bits (81), Expect = 0.026
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PP P PP P P P PPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 36.3 bits (80), Expect = 0.035
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPPXXR 908
P P P P P P PPP P PP P P PA R PP R
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPP-PPPPAPPPPPPPPPPPPPALRLACAPPRLR 444
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.7 bits (76), Expect = 0.11
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = +3
Query: 738 PXPXPXPXXX------PXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P PP GG P P PPPP
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPP 990
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PPP P PP G+P P+ A PPPP
Sbjct: 696 PPPPPPPPLLSGTLPMPPPPPPP----PPGCAGLPPPPPSPQPGCAGLPPPPPP 745
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P P G+P P A PPPP
Sbjct: 710 PMPPPPPPPPPGCAGLPPPPPSPQ----PGCAGLPPPPPPPPPGCAGLPPPPPP 759
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PPP P P G +P P P PPPP
Sbjct: 678 PPPPPLPVIEGSSLSVPPPPPPPPP--PLLSGTLPMPPPPPPPPPGCAGLPPPP 729
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 786 PPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
PPP +PP GG P P PA PPPP
Sbjct: 281 PPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAPPPP 318
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +3
Query: 699 NPKXYXXNXXPXHPXPX----PXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXX 866
NP N P P P P P PPP P PP G P PT
Sbjct: 345 NPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 404
Query: 867 XPAXRXXPPPP 899
P PPPP
Sbjct: 405 PP-----PPPP 410
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPT 857
P P P P P PPP P PP G P PT
Sbjct: 374 PPPPPPPTNGPPPP--PPPTNGPPPPPPPTNGPPPPPPPT 411
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +3
Query: 696 FNPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPA 875
+ P Y P +P P P P P PP P PP P P P
Sbjct: 174 YPPPPYPPPPNPPYPPP-PNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP- 231
Query: 876 XRXXPPPP 899
PPPP
Sbjct: 232 --PYPPPP 237
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +3
Query: 693 YFNPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP 872
Y P Y P +P P P P PPP P P P P
Sbjct: 102 YPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLY 161
Query: 873 AXRXXPPPP 899
PPPP
Sbjct: 162 PPPPNPPPP 170
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = +3
Query: 696 FNPKXYXXNXXPXHPX-PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP 872
+ P Y P P P P P P PP P PP P P P
Sbjct: 156 YPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Query: 873 AXRXXPPPP 899
P PP
Sbjct: 216 NAPNPPYPP 224
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PPP P PP P P+ PPP
Sbjct: 98 PYPPYPPPPPYPPPPNPPYPPP---PNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +3
Query: 699 NPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAX 878
NP P P P P P P PP P P P P P
Sbjct: 113 NPPYPPPPNAPYPPPPNP-PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPN 171
Query: 879 RXXPPPP 899
PPPP
Sbjct: 172 APYPPPP 178
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +3
Query: 699 NPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAX 878
NP P P P P P PPP P PP P P P
Sbjct: 129 NPPYPPPPNAPYPPSPNA-PYPPPPNPPYPPPLYPPPPNPPPPNAPYP---PPPYPPPPN 184
Query: 879 RXXPPPP 899
PPPP
Sbjct: 185 PPYPPPP 191
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PP P P P P P PPPP
Sbjct: 173 PYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNP---PYPPPP 226
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 757 PXPXPXXXXXPPXXXPPXXGFPPFXXGFXXPPXLPXXXP 873
P P P PP PP +PP PP P P
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPP 134
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P PPP P P P P P PPP
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPP 199
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +3
Query: 720 NXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
N P P P P P PPP P PP P P PP P
Sbjct: 87 NFSPNPPYPPPPYPPYPPPPPYPPPPNPPYP--PPPNAPYPPPPNPPYPPPPNAPYPPSP 144
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPP--PXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P +P P P P P PP P P PP P P P PPP
Sbjct: 151 PPNP-PYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPP 207
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PPP G P P+ + PPPP
Sbjct: 688 PPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPP 744
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 31.5 bits (68), Expect = 0.99
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG G G G GG G GGG G G G G G
Sbjct: 822 GGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 875
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G G GG G GGG G G G G G G
Sbjct: 814 GGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGG 870
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G G G G GGG G G G G G G
Sbjct: 816 GGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGG 872
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 757 PXPXPXXXXXPPXXXPPXXGFPPFXXGFXXPPXLP 861
P P P PP PP G PP G PP P
Sbjct: 364 PPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P PPP PP G P P PPPP
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPP 366
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXX--PXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P PPP P PP GG P P P PPP
Sbjct: 339 PPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPP 394
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP 872
P P P P P PPP P P GG P P P
Sbjct: 162 PQPPAPPAAPFMAPAAPPAPPPPGAPAAPPAPPFGGPPSAPPPPPAPP 209
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 735 HPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXP-TXXXXPAXRXXPPPP 899
H P P P PPP P PP G+P P P PPPP
Sbjct: 1219 HSAPRPPPMGHHMMNMPPPPPAMPPDG-PPKFMGLPPPPPGMRPMPPQPPFMPPPP 1273
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -1
Query: 907 RXXGGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
R GGG R G G G GG G GGG G G G G G
Sbjct: 155 RGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGG 211
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P PPP P P GG P P P+ + PPPP
Sbjct: 341 PPPPPISKPPTSTRSAPPP---PPGRAPQPLGG-PPPPPPGRRPPSGKINPPPP 390
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP-AXRXXPPPPXXR 908
P P P PP PP G + P P + R PPPP R
Sbjct: 308 PAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGR 363
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P PPP P P GG P P P+ + PPPP
Sbjct: 253 PPPPPISKPPTSTRSAPPP---PPGRAPQPLGG-PPPPPPGRRPPSGKINPPPP 302
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP-AXRXXPPPPXXR 908
P P P PP PP G + P P + R PPPP R
Sbjct: 220 PAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGR 275
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G T G T G GGG G G G G G
Sbjct: 248 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATG 304
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G T G T G GGG G G G G G
Sbjct: 255 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATG 311
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G T G T G GGG G G G G G
Sbjct: 262 GGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGGGATG 318
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G T G T G GGG G G G G G
Sbjct: 283 GGGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATG 339
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G G T G T G GGG G G G G G
Sbjct: 290 GGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTG 346
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG G G T G T G GGG G G G G
Sbjct: 304 GGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGG 357
>SB_42645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 12 LPISPTMGIPLRFYWQP*SNLNLQNGASPLIEQIIFFH 125
L + +G PLR YW + L L + A PL II+++
Sbjct: 247 LKLINVIGSPLRLYWPVWTILELAHYARPLTNPIIYYY 284
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP PP P P PA PPPP
Sbjct: 50 PPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPA---PPPPP 98
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPP---PXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP P P PP P P PA PPP
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPP 107
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXG 743
GGGG G G G GG G GGG G G G G
Sbjct: 63 GGGGGGGGGGGGGGGGGGGGGDDGDGGGGDGGGGGGGGDGGGGGGGGGGGVG 114
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +3
Query: 675 TYXT*XYFNPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXP 854
+Y T + P Y + P P P P PPP P PP P
Sbjct: 292 SYQTAPGYPPPQYMPHPRMRPPTRIPPPGMGPPPRIPPPPIRAPVDVYPPRAPQGASQTP 351
Query: 855 TXXXXPAXRXXPP 893
R PP
Sbjct: 352 PYPGSHYSRVPPP 364
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PPP P PP P P+ A + PPP
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPP-----PPPPPSPPRPLAAKLPEPPP 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,285,246
Number of Sequences: 59808
Number of extensions: 247324
Number of successful extensions: 1172
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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