Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I22
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 0.001
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 0.001
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.003
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.003
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.003
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.094
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.50
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.87
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.87
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.87
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.87
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.5
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXP--PPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PP P PP GG+P P P PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVP--PXXGGVPXXXP-TXXXXPAXRXXPPPP 899
P P P P P PPP P P P G+P P + P PPPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPPXXR 908
P P P P P PP P P GG+P P PPPP R
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAGPGMYPPPPPSR 370
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXP--PPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P P PP P PP GG+P P P PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVP--PXXGGVPXXXP-TXXXXPAXRXXPPPP 899
P P P P P PPP P P P G+P P + P PPPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPPXXR 908
P P P P P PP P P GG+P P PPPP R
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAGPGMYPPPPPSR 380
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P +PP GG P P P PPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P PPP P +PP GG P P P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P PP P P PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPP-----PPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P +PP GG P P P PPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P PPP P +PP GG P P P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P PP P P PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPP-----PPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P +PP GG P P P PPPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P PPP P +PP GG P P P PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P PP P P PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPP-----PPPPPPPGGFKGGPPPPPPP 373
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P P +P P P+ PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P PPP P PP P P P P P
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAP 94
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P PP P P P PPPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPP-----PMCPPPPPPPPPPMCPPPPP 79
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P P PPP P + P G P P A PPPP
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPP--PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG G G G GG G GGG G G G G G
Sbjct: 136 GGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG*XG 728
GGGG G P GG G GGG G G G G G G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGG 151
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP PP G P PT P PPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP P PP G +P PA PPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 786 PPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
PPP P P G P P P R PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP PP G P PT P PPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP P PP G +P PA PPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 786 PPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
PPP P P G P P P R PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP PP G P PT P PPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 738 PXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
P P P P PP P PP G +P PA PPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPT-GSLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 786 PPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPP 899
PPP P P G P P P R PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG R G G PP G G GGG G G G G G
Sbjct: 130 GGGGGGRGGGGRGGDGRG---PPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAG 180
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG VG G GG G GGG G G G G G
Sbjct: 75 GGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGG 128
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +3
Query: 699 NPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAX 878
NPK P P P P P P P P P P P P
Sbjct: 162 NPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKP 221
Query: 879 RXXPPP 896
+ P P
Sbjct: 222 KPKPKP 227
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/65 (24%), Positives = 17/65 (26%)
Frame = +3
Query: 702 PKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXR 881
PK P P P P P P P P P P P P +
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPK 214
Query: 882 XXPPP 896
P P
Sbjct: 215 PKPEP 219
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/66 (24%), Positives = 18/66 (27%)
Frame = +3
Query: 699 NPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAX 878
+PK P P P P P P P P P P P P
Sbjct: 182 DPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEP 241
Query: 879 RXXPPP 896
+ P P
Sbjct: 242 KPKPKP 247
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/65 (24%), Positives = 18/65 (27%)
Frame = +3
Query: 702 PKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXR 881
PK +P P P P P P P P P P P P +
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPK 246
Query: 882 XXPPP 896
P P
Sbjct: 247 PKPKP 251
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/65 (24%), Positives = 17/65 (26%)
Frame = +3
Query: 702 PKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXR 881
PK P P P P P P P P P P P P +
Sbjct: 191 PKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPK 250
Query: 882 XXPPP 896
P P
Sbjct: 251 PEPKP 255
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 895 GGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGG G G G GG G GGG G G G G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 895 GGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGG G G G GG G GGG G G G G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPPPXXR 908
P P P P P PPP P PP P P P PPPP R
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPC-PAQFCPP-----PPICPPPPPPPMPCPPPPPPMPR 90
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 693 YFNPKXYXXNXXPXHPXPXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXP 872
+F P P P P P P PP PP GG+P P P
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPP-------PPMMGGIPPPPPMFGAPP 115
Query: 873 AXRXXPPPP 899
PPPP
Sbjct: 116 ----PPPPP 120
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
G GG G G G GG G GGG G G G G G
Sbjct: 83 GNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG AG G GG G GG G G G G G
Sbjct: 505 GGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGGRG 558
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 898 GGGGXXRXAGXXXXVGXXXGTPPXXGGTXXXGXXXGGGXXXXXGXXXGXGXGXG 737
GGGG AG G GG G GG G G G G G
Sbjct: 505 GGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGGRG 558
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXV----PPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P P P P P + PP G+ P R PP
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPA 168
Query: 897 P 899
P
Sbjct: 169 P 169
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 729 PXHPXPXPXPXXXPXXXXXPPPXXXPXXXV----PPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P P P P P P P + PP G+ P R PP
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPA 168
Query: 897 P 899
P
Sbjct: 169 P 169
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P PPP P +PP G+P P A PPP
Sbjct: 75 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP--PPHIGLGAAPYAVPPP 123
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P PPP P +PP G+P P A PPP
Sbjct: 98 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP--PPHIGLGAAPYAVPPP 146
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 744 PXPXPXXXPXXXXXPPPXXXPXXXVPPXXGGVPXXXPTXXXXPAXRXXPPP 896
P P P PPP P +PP G+P P A PPP
Sbjct: 348 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP--PPHIGLGAAPYAVPPP 396
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,921,614
Number of Sequences: 27780
Number of extensions: 218373
Number of successful extensions: 1178
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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