Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I21
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    31   1.3  
02_03_0224 - 16577234-16577494,16577798-16577996,16578069-165781...    29   6.8  
12_01_0378 - 2946916-2947590                                           28   9.0  
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290...    28   9.0  
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866...    28   9.0  

>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
            2353031-2353708,2353800-2353964,2354139-2354433,
            2354581-2354795,2354885-2355190,2355269-2355332,
            2355426-2355665,2355783-2355886
          Length = 1505

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 41   DLSSXLGNTQDSTLQR*SPL*LFYVFSWHLCMLQIPTSLTTFWRSSFTIASSSPITTV 214
            D++  LG    +T+Q    + +    +W + +L +P ++   W   + IASS  +T +
Sbjct: 1054 DIAFRLGGFASTTIQLLGIVAVMSKVTWQVLILIVPMAVACMWMQRYYIASSRELTRI 1111


>02_03_0224 -
           16577234-16577494,16577798-16577996,16578069-16578139,
           16578442-16578517,16578632-16578762,16578853-16578978,
           16579075-16579248,16579414-16579484,16579752-16579923,
           16581780-16581892,16582705-16582779,16582913-16583009,
           16583448-16583534,16583535-16583589,16583650-16583828
          Length = 628

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +1

Query: 226 SKHLYEEKKSEVITNVVNXLIRNNKMNCMEYAYXLWLQGSKXHRPGLFPS*VQTYLRR 399
           S+ + +  K E+I+ +++ +    ++NC E    +W+Q S  H   L    +QT L++
Sbjct: 447 SRSITQMSKQELISGLLHYI---QQINCAEAMEKIWVQSSMPHFISLSLKQLQTILKK 501


>12_01_0378 - 2946916-2947590
          Length = 224

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +1

Query: 70  GLDAPKMKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYD 210
           G+    ++P +++L    ASL AA++ VP    + ++  +VV  D+D
Sbjct: 87  GVHYDAIRPRLLLLLAGGASLGAANATVPGVFHQPRMSTTVVAIDFD 133


>10_07_0045 +
           12328388-12328419,12328504-12328645,12328862-12329054,
           12329224-12329320,12329404-12329528,12329616-12329734,
           12331225-12331298,12331359-12331413,12331450-12331500,
           12331611-12331857,12331940-12332036,12332170-12332244,
           12334286-12334488,12334757-12334905,12334995-12335168,
           12335276-12335401,12335493-12335623,12335743-12335818,
           12335898-12336027,12336115-12336193,12336267-12336465,
           12336591-12336698,12336769-12337025,12337267-12337282
          Length = 984

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +1

Query: 250 KSEVITNVVNXLIRNNKMNCMEYAYXLWLQGSKXHRPGLFPS*VQTYLRR 399
           K E+I+ +++ +    ++NC E    +W+Q S+ H   L    +QT L++
Sbjct: 771 KQELISGLLHYI---QQINCAEAMEKIWVQSSRPHYISLSLKQLQTILKK 817


>09_04_0745 +
           19884868-19886000,19886110-19886309,19886422-19886666,
           19886880-19887668
          Length = 788

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 644 SPRPQFHRPXVPXPCXRTPXPLXPXXXRPHTRXSPRCXXLXAPGPPXXPR 793
           +P PQ  RP  P P    P P+ P      T+ +P      AP PP  PR
Sbjct: 256 APPPQSVRPPPPPPPPPPPPPMPPRTDNASTQAAP------AP-PPPLPR 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,320,644
Number of Sequences: 37544
Number of extensions: 318001
Number of successful extensions: 976
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)