Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I19
(911 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18) 38 0.009
SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22) 38 0.009
SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.026
SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.060
SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24) 34 0.18
SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34) 33 0.32
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.32
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 32 0.74
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 31 1.7
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 30 3.0
SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05) 30 3.0
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 6.4
SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
>SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18)
Length = 195
Score = 38.3 bits (85), Expect = 0.009
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +3
Query: 225 LTSSQRPRFGQMPVLVI-DGKQYAQSTAICRYLGRKYGLAGANDEEAFEIDQNVEFLHDI 401
+ +S R FG++P+L I DG++ AQS AI R+L +++ + + F+
Sbjct: 43 MKTSGRCPFGELPLLEISDGRKLAQSHAIFRFLAKEHEGGDSRNGAFFK----------- 91
Query: 402 RAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKG---HIAAGKLTWGDFV 572
E +K +K ++F + P L+ +N + + NKG ++ K+T+ D
Sbjct: 92 -----------REHVKEQKSKEFHEETLPKRLEFINKLFQENKGGKGYLVGDKITYADID 140
Query: 573 FTSMFD 590
F F+
Sbjct: 141 FFCFFN 146
>SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22)
Length = 79
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 107 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFK 235
MP +YF + E R++ A G +FED+R+ +WP K
Sbjct: 1 MPSYKLYYFNARGRAEPARLVFAAAGIEFEDNRMAMGEWPKVK 43
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 249 FGQMPVLVIDGK-QYAQSTAICRYLGRK 329
FGQ+P+LVID K + AQS AI ++ R+
Sbjct: 50 FGQVPLLVIDDKIKLAQSLAIMTFIARE 77
>SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 327 KYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKL 506
K LA ++D D V+ D+ + + +E DE + + F + P ++ +
Sbjct: 130 KSSLAPSDDYLQARCDMLVDNNKDMMDRLGEIVWELDEVRQEMLKKKFYDEILPVQMENI 189
Query: 507 NSIVEAN---KGHIAAGKLTWGDFVFTSMFD 590
N +++ N KG++ K+T+ D F F+
Sbjct: 190 NKLLQENNGGKGYLVGDKITYADIDFFCFFN 220
>SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 35.5 bits (78), Expect = 0.060
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 255 QMPVLVIDGKQY---AQSTAICRYLGRKYGLAGANDEEAFEID 374
Q+P + K++ QS AI RY+GRKY + G +EE +D
Sbjct: 3 QLPYYIDGDKKHIKITQSNAILRYIGRKYDMCGKTEEEKVIVD 45
>SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24)
Length = 102
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 243 PRFGQMPVLVIDGK-QYAQSTAICRYLGRK 329
P FGQ+P+LVID K + AQS AI Y+ R+
Sbjct: 71 PPFGQVPLLVIDDKIKLAQSMAILAYVARE 100
Score = 32.7 bits (71), Expect = 0.42
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 104 KMPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLS-ADWPDFKPK 241
KMP HYF + E R+ A G ++ED R +W KP+
Sbjct: 22 KMPSYKLHYFNARGRAEPARLAFAAAGIEYEDKRFEGREEWLRVKPE 68
>SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34)
Length = 428
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 96 TN*KCLRLCTITSLARLSGRAAVCCSPTEARTSKTTACSLLTGLTSSQRPRFGQMP 263
T +C L TI L++ + R ++ AC LLT L + +RP G+MP
Sbjct: 221 TRRQCRHLTTIVQLSKPAKEILRDLGCRRGRGAEPAACRLLTRLRNEERPPVGRMP 276
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +2
Query: 668 PPXXPPXXXXAFXXXXGXPPXPPXXXPPXXPXXXXXXXXXXPXXPXPXXXXXXXXXPXXX 847
PP PP PP PP PP P P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 848 XPXPXXXP 871
P P P
Sbjct: 425 PPPPPPPP 432
Score = 31.5 bits (68), Expect = 0.98
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 659 PXXPPXXPPXXXXAFXXXXGXPPXPPXXXPPXXPXXXXXXXXXXPXXPXPXXXXXXXXXP 838
P PP PP PP PP PP P P P P P
Sbjct: 365 PPPPPPPPPPPPS--------PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Query: 839 XXXXPXPXXXPXXXP 883
P P P P
Sbjct: 417 PPAPPPPPPPPPPPP 431
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +2
Query: 641 PXXKKXPXXPPXXPPXXXXAFXXXXGXPPXPPXXXPPXXPXXXXXXXXXXPXXPXP 808
P P PP PP + PP PP PP P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPS-PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 31.9 bits (69), Expect = 0.74
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 219 TGLTSSQRPRFGQMPVLVIDGKQYAQSTAICRYLGRKYGL 338
T + + + G +PVL +DG QY +S AI R + GL
Sbjct: 40 TKMKAENKTIMGYLPVLEVDGIQYCESMAIFRLAAKLAGL 79
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 107 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFK 235
MP YF + E R+ A GG +ED R+ +W K
Sbjct: 1 MPNYKLIYFNTRGRAEPTRLCFAAGGIPYEDVRLTGEEWTKMK 43
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 548 SGSNVTFVR--FNYXVQLLQHIRVYVFRKVLVFFCF*LLISFVVYSGRFGANIVQELHVL 375
SGS FV F + VQ+ + V V +FC L FV+ RF +Q+ +
Sbjct: 811 SGSLYKFVLLLFRFPVQV-RVTSVQVLCTDFCYFCSGSLYRFVLLLFRFSVQKLQDAYTQ 869
Query: 374 VDLEGLLVIGPGE 336
+ L+ VI PGE
Sbjct: 870 LALQAAKVISPGE 882
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +3
Query: 429 EADEELKAKKHEDFSKNVYPDMLKKLNSIVE-----ANKGHIAAGKLT 557
EA +EL KKHE+FSK + +K+N +++ AN GH A K+T
Sbjct: 267 EAVQEL-IKKHEEFSKRM-DVQDEKINQMIQFAQRLANDGHYAQDKIT 312
>SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05)
Length = 280
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 137 CKALGESGRMLLAYGGQDFEDHR 205
C+ LG+ R+LL Y +DFED R
Sbjct: 194 CQKLGQPIRLLLKYTNEDFEDKR 216
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/81 (22%), Positives = 19/81 (23%)
Frame = +2
Query: 641 PXXKKXPXXPPXXPPXXXXAFXXXXGXPPXPPXXXPPXXPXXXXXXXXXXPXXPXPXXXX 820
P P PP P + P PP P P P P P
Sbjct: 159 PLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAP 218
Query: 821 XXXXXPXXXXPXPXXXPXXXP 883
P P P P P
Sbjct: 219 NPPYPPPPNAPNPPYPPPPNP 239
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/56 (25%), Positives = 15/56 (26%)
Frame = +2
Query: 641 PXXKKXPXXPPXXPPXXXXAFXXXXGXPPXPPXXXPPXXPXXXXXXXXXXPXXPXP 808
P P PP PP + PP PP P P P P
Sbjct: 141 PPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYP 196
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 590 LPEDMLPIPDLXSHIXIPXXKKXPXXPPXXPPXXXXAFXXXXGXPPXPPXXXPP 751
+P +LPIP + + + P P PP PP + PP PP PP
Sbjct: 669 IPIQILPIP-IQTMVPPPPPPPPPPPPPPPPPPPQPS------TPPPPPPSTPP 715
>SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 113 KVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPK 241
+V HYF + E R+++ G + + DWP K K
Sbjct: 53 QVTLHYFGSRGKAEGIRLMMEDNGVLYAETNYTKEDWPTVKQK 95
>SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 24.2 bits (50), Expect(2) = 6.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 634 PDPXXXKNXXXPPPXPPP 687
P+P + PPP PPP
Sbjct: 169 PNPSPPPSGAPPPPPPPP 186
Score = 23.0 bits (47), Expect(2) = 6.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 667 PPPXPPPXXXXLXY 708
PPP PPP L Y
Sbjct: 179 PPPPPPPPLFLLFY 192
>SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 390 LHDIRAKAAAVYYEA--DEELKAKKHEDFSKNVYP 488
LHD+R +AAAV A EE E+F+K+ +P
Sbjct: 15 LHDVRDRAAAVLERAKTGEERADDSEEEFAKSFHP 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,045
Number of Sequences: 59808
Number of extensions: 320760
Number of successful extensions: 1575
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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