Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I18
         (961 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   8.1  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = -1

Query: 214 YSRCCHYVLCSHWVSAGSCPCYRQRCGYSRHFLLYF*HKIHFKIAVT 74
           + R  H    S+   A      RQR  Y+RH +L    + H+   +T
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = -1

Query: 214 YSRCCHYVLCSHWVSAGSCPCYRQRCGYSRHFLLYF*HKIHFKIAVT 74
           + R  H    S+   A      RQR  Y+RH +L    + H+   +T
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = -1

Query: 214 YSRCCHYVLCSHWVSAGSCPCYRQRCGYSRHFLLYF*HKIHFKIAVT 74
           + R  H    S+   A      RQR  Y+RH +L    + H+   +T
Sbjct: 213 WMRKVHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLT 259


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 119 KMSTIAAPLSVAGTRSCGDPVRTQNV 196
           K+STIA  L V  TRS   P  T+ +
Sbjct: 36  KLSTIALALGVERTRSELIPFLTETI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,889
Number of Sequences: 336
Number of extensions: 3757
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27099446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)