Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I18
(961 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 123 2e-28
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 122 4e-28
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 3e-18
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 73 3e-13
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 69 6e-12
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 9e-10
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 58 1e-08
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 50 3e-06
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 50 4e-06
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 47 3e-05
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.79
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 29 4.2
SB_6909| Best HMM Match : UPAR_LY6 (HMM E-Value=0.017) 29 4.2
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 28 9.8
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 123 bits (296), Expect = 2e-28
Identities = 60/124 (48%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Frame = +2
Query: 182 RTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVE 361
+ +++ +I+K+SLGP G+DKM+V G+VTVTNDGATIL M+EV+H AK++VE
Sbjct: 32 KQSHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVE 91
Query: 362 LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKY---IQD 532
L++ QD E+GDGTT VV++A LL++A++L+ IHP I GY L K A+++ I D
Sbjct: 92 LSKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDSIAD 151
Query: 533 NLTV 544
N V
Sbjct: 152 NFPV 155
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 122 bits (294), Expect = 4e-28
Identities = 57/106 (53%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
Frame = +2
Query: 218 NIVKSSLGPVGLDKMLVD--DIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVG 391
++VKS+LGP G+DK+L G++ VTNDGATILK + +++PAAK+LVEL+++QD+EVG
Sbjct: 34 DLVKSTLGPKGMDKILQSFGQNGNIQVTNDGATILKSIGIDNPAAKILVELSKVQDDEVG 93
Query: 392 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQ 529
DGTTSV ++ +ELLK A++LV KIHP +I++G+R K A K ++
Sbjct: 94 DGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALE 139
Score = 31.9 bits (69), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 564 RPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIK 671
R L+N A+TT+SSK++ D F+++ V A +K
Sbjct: 153 REDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLK 188
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 89.8 bits (213), Expect = 3e-18
Identities = 37/83 (44%), Positives = 61/83 (73%)
Frame = +2
Query: 290 VTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIH 469
+TNDG IL+ ++V+HPAAK ++E+++ QDEEVGDGTTSV+I+A E + A+ ++ ++H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 470 PTSIISGYRLXCKEAVKYIQDNL 538
PT II+ YRL + + ++ +
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQI 83
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 77.8 bits (183), Expect = 1e-14
Identities = 31/72 (43%), Positives = 53/72 (73%)
Frame = +2
Query: 323 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLX 502
++V+HPAAK ++E+++ QDEEVGDGTTSV+I+A E + A+ ++ ++HPT II+ YRL
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 503 CKEAVKYIQDNL 538
+ + ++ +
Sbjct: 269 MDDMIDILKQQI 280
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +2
Query: 164 SCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA 343
S G P N+ + V+++LGP G+DK++VD G T++NDGATI+ +L++ HPA
Sbjct: 651 SQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISNDGATIINLLDIVHPA 710
Query: 344 AKVLVELAQLQDEE 385
AK LV++A+ QD E
Sbjct: 711 AKTLVDIAKSQDAE 724
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/56 (53%), Positives = 45/56 (80%)
Frame = +2
Query: 362 LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQ 529
L+++QD+EVGDGTTSV ++A+ELLK A++LV KIHP +I++G+R K A K ++
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALE 57
Score = 31.9 bits (69), Expect = 0.79
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 564 RPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIK 671
R L+N A+TT+SSK++ D F+++ V A +K
Sbjct: 71 RDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLK 106
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 61.7 bits (143), Expect = 9e-10
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +2
Query: 326 EVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXC 505
+++HP A ++ +A QD+ GDGTTS V+I ELLK AD V +HP + G+ +
Sbjct: 170 QIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAK 229
Query: 506 KEAVKYIQD 532
K+A++ +++
Sbjct: 230 KKALEVLEE 238
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 558 LXRPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIK 671
+ R +LIN AKT++ +K+ AD +E+VV A I+
Sbjct: 245 MDRDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIR 282
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = +2
Query: 221 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGT 400
I+K S GP GLD ML G++ +TN G+ IL+ L + +P +++VE A+ G G
Sbjct: 15 ILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARSLSGRTGSGA 74
Query: 401 TSVVIIAAELLK 436
+ +II AE+ +
Sbjct: 75 SYFIIILAEIFR 86
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 740 SAXXSVLVKGYALNCTVPSQACPXTFSXAKIPCPDFSL 853
SA S+LV GYALNCT+ SQA P + AKI C DF+L
Sbjct: 69 SAKESILVDGYALNCTIASQAMPKQVTNAKIACLDFTL 106
Score = 48.4 bits (110), Expect = 9e-06
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 558 LXRPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNPRGNTIYP 704
L R +++ A T +SSKLIG DFF+ M+V A A+K +G YP
Sbjct: 8 LGRDCIVSAANTALSSKLIGQQGDFFANMIVDAVMAVKRTGNKGEAKYP 56
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +2
Query: 179 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATI--LKMLEVE-HPAAK 349
+R N+ + +++SLGP G+DKM+ GDVT+TNDGATI + +++E P K
Sbjct: 25 IRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATIKLIDTVDLEGGPVGK 84
Query: 350 VLVELAQLQDEEVGD 394
+V A + G+
Sbjct: 85 PVVPAALMNRPTRGE 99
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 46.8 bits (106), Expect = 3e-05
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Frame = +2
Query: 224 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 391
V +LGP G + ++ G +T DG T+ K +E+ ++ A+++ ++A +EE G
Sbjct: 83 VAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKAIELKDKYQNIGARLVQDVANNTNEEAG 142
Query: 392 DGTTSVVIIAAELLKNADELVKTKIHPTSIIS-----GYRLXCKEAVKYIQDNLTVTVES 556
DGTT+ ++A + V +P + S GY V IQ + +
Sbjct: 143 DGTTTATVLARSIATEGFLHVSKGANPQEVSSLENAMGYDAANNTYVDMIQAGIIDPTKV 202
Query: 557 LGQAVSD 577
+ A++D
Sbjct: 203 VRTAITD 209
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 31.9 bits (69), Expect = 0.79
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 564 RPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNP 683
R L A T +SSKLI +FF++MVV A + + P
Sbjct: 21 RQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLP 60
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 301 IVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVLCSHWVSA----GSCPC 152
+ +PN + + T PKG Y C +C + C H + G+C C
Sbjct: 70 VTQGTTVPNAIEGEICNTRCPKGYYGYGCSKKCSN---CQHGATCDPVNGTCSC 120
>SB_6909| Best HMM Match : UPAR_LY6 (HMM E-Value=0.017)
Length = 472
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/59 (25%), Positives = 23/59 (38%)
Frame = -1
Query: 310 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVLCSHWVSAGSCPCYRQRCG 134
C + +DCN L +G CY CC LC+++V + + R G
Sbjct: 388 CSVVSADCNENGTRCDRLTSVLKDRGLTLKNCYVNCCQGDLCNNFVPSPTPEVMMARSG 446
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 425 ELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQDNL 538
E + A+ ++ ++HPT II+ YRL + + ++ +
Sbjct: 3 EFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQI 40
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 28.3 bits (60), Expect = 9.8
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 KMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTTS--VVIIAAEL 430
K L DD+GD+ + + + +E H A + + V DG V + E
Sbjct: 285 KGLFDDVGDMGHKELKSVVKRSMEEHHAKAASAYFMRYFNEYRVSDGLLDGPFVKMGVET 344
Query: 431 LKNADELVKTKIHPTSI 481
+K + VK I T I
Sbjct: 345 VKETMQFVKQMIKSTGI 361
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 28.3 bits (60), Expect = 9.8
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 59 QKQKKRDGDFKVNFVLKIQ*KMSTIAAPLSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSL 238
Q++ +D ++K + + Q +AA + R+ V T+ + I+K L
Sbjct: 1965 QQEASKDANYKKDRARQEQLARDRLAA---LKAKRAAKHKVLTEEEVQRQARDEIIKEQL 2021
Query: 239 GPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA-AKVLVELAQLQDEEVGDGTTSVVI 415
+ DK+ DI V IL +E +H + L EL Q + +E DG +
Sbjct: 2022 ADLEADKLQAMDIHQGGVAGLQEAILNEVEKKHTTEQQALSELLQ-EIQEDADGIAAAQY 2080
Query: 416 IAAE 427
++ +
Sbjct: 2081 LSQD 2084
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,744,686
Number of Sequences: 59808
Number of extensions: 462773
Number of successful extensions: 967
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2824376637
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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