Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I18
(961 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 246 1e-65
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 246 1e-65
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 124 9e-29
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 124 9e-29
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 124 9e-29
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 122 4e-28
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 122 4e-28
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 118 5e-27
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 116 2e-26
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 110 2e-24
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 110 2e-24
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 95 7e-20
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 88 1e-17
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 88 1e-17
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 48 1e-05
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 45 7e-05
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 29 6.5
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 29 6.5
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 246 bits (603), Expect = 1e-65
Identities = 138/240 (57%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Frame = +2
Query: 143 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 322
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 323 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLX 502
LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GYRL
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 503 CKEAVKYIQDNLTVTVESLG-QAV--SDQHSQNXYVV*TNWS*CRFLLXXXXXXXXXXQN 673
CKEAVKYI +N++ T +S+G Q+V + + S + ++ + L+ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENN 188
Query: 674 NEPQRKHYIPYQSY*HSESPRXSAXXSVLVKGYALNCTVPSQACPXTFSXAKIPCPDFSL 853
K P + ++ SA SVLVKGYALNCTV SQA P AKI C DFSL
Sbjct: 189 G----KVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSL 244
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3
Query: 558 LXRPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNPRGNTIYP 704
+ R S++N AKT+MSSK+IG DADFF E+VV AA+A++ N G YP
Sbjct: 147 IGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN-NGKVTYP 194
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 246 bits (603), Expect = 1e-65
Identities = 138/240 (57%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Frame = +2
Query: 143 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 322
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 323 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLX 502
LEVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GYRL
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 503 CKEAVKYIQDNLTVTVESLG-QAV--SDQHSQNXYVV*TNWS*CRFLLXXXXXXXXXXQN 673
CKEAVKYI +N++ T +S+G Q+V + + S + ++ + L+ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENN 188
Query: 674 NEPQRKHYIPYQSY*HSESPRXSAXXSVLVKGYALNCTVPSQACPXTFSXAKIPCPDFSL 853
K P + ++ SA SVLVKGYALNCTV SQA P AKI C DFSL
Sbjct: 189 G----KVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSL 244
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +3
Query: 558 LXRPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNPRGNTIYP 704
+ R S++N AKT+MSSK+IG DADFF E+VV AA+A++ N G YP
Sbjct: 147 IGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN-NGKVTYP 194
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 124 bits (299), Expect = 9e-29
Identities = 60/113 (53%), Positives = 83/113 (73%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 337
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 338 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 496
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 124 bits (299), Expect = 9e-29
Identities = 60/113 (53%), Positives = 83/113 (73%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 337
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 338 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 496
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 124 bits (299), Expect = 9e-29
Identities = 60/113 (53%), Positives = 83/113 (73%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 337
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 338 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 496
PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGYR
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYR 128
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 122 bits (294), Expect = 4e-28
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = +2
Query: 218 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 397
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 398 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVK 520
TT VV++A LL+ A++L+ IHP I G+ L CK+A++
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 122 bits (294), Expect = 4e-28
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = +2
Query: 218 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 397
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 398 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVK 520
TT VV++A LL+ A++L+ IHP I G+ L CK+A++
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 122 bits (294), Expect = 4e-28
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = +2
Query: 218 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 397
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 398 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVK 520
TT VV++A LL+ A++L+ IHP I G+ L CK+A++
Sbjct: 107 TTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 118 bits (285), Expect = 5e-27
Identities = 54/137 (39%), Positives = 89/137 (64%)
Frame = +2
Query: 143 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 322
LS R G V+ N+ +++++SLGP + KML+D +G + +TNDG IL+
Sbjct: 12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILRE 71
Query: 323 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLX 502
+ V+HPAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II YR
Sbjct: 72 ITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQA 131
Query: 503 CKEAVKYIQDNLTVTVE 553
++ +++ ++ + TV+
Sbjct: 132 LEDMIQWSENKFSKTVD 148
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 116 bits (280), Expect = 2e-26
Identities = 60/133 (45%), Positives = 84/133 (63%)
Frame = +2
Query: 173 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 352
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 353 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQD 532
LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ EA K I D
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK-ILD 148
Query: 533 NLTVTVESLGQAV 571
++ V+ A+
Sbjct: 149 EMSSPVDLSNDAL 161
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 116 bits (280), Expect = 2e-26
Identities = 60/133 (45%), Positives = 84/133 (63%)
Frame = +2
Query: 173 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 352
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 353 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQD 532
LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I ++ EA K I D
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK-ILD 148
Query: 533 NLTVTVESLGQAV 571
++ V+ A+
Sbjct: 149 EMSSPVDLSNDAL 161
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 110 bits (264), Expect = 2e-24
Identities = 48/103 (46%), Positives = 74/103 (71%)
Frame = +2
Query: 224 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 403
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 404 SVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQD 532
SVV++AAE+LK ++ +HP +I C++ +K + D
Sbjct: 96 SVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD 138
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 564 RPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNP 683
R L+ A TT+SSKL+ + FF+ M+V A + P
Sbjct: 150 REMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 110 bits (264), Expect = 2e-24
Identities = 48/103 (46%), Positives = 74/103 (71%)
Frame = +2
Query: 224 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 403
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 404 SVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYIQD 532
SVV++AAE+LK ++ +HP +I C++ +K + D
Sbjct: 96 SVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD 138
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 564 RPSLINTAKTTMSSKLIGADADFFSEMVVXAAQAIKTMNP 683
R L+ A TT+SSKL+ + FF+ M+V A + P
Sbjct: 150 REMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLP 189
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 95.1 bits (226), Expect = 7e-20
Identities = 41/118 (34%), Positives = 78/118 (66%)
Frame = +2
Query: 173 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 352
D +N+ + ++S+ GP G++KM+++ I + VTND ATILK LE++HPAA++
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARI 84
Query: 353 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAVKYI 526
++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY ++A++ +
Sbjct: 85 IIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEIL 142
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 87.8 bits (208), Expect = 1e-17
Identities = 38/101 (37%), Positives = 61/101 (60%)
Frame = +2
Query: 191 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 370
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 371 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 493
QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 87.8 bits (208), Expect = 1e-17
Identities = 38/101 (37%), Positives = 61/101 (60%)
Frame = +2
Query: 191 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 370
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 371 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 493
QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +2
Query: 224 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 391
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 392 DGTTSVVIIAAELLKNADELVK 457
DGTT ++A + K E ++
Sbjct: 102 DGTTCATVLARAIAKEGFESIR 123
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +2
Query: 224 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 391
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 392 DGTTSVVIIAAELLKNADE 448
DGTT ++ + K E
Sbjct: 102 DGTTCATVLTRAIAKEGFE 120
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 338 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLXCKEAV 517
P A +A +E+GDG V ++A+E+ N E+ KT++ S L KE
Sbjct: 90 PPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSFRRAIGLRVKETK 147
Query: 518 KYIQDNLT 541
+ +T
Sbjct: 148 DVYEGEVT 155
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 310 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 188
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 310 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 188
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 284 VTVTNDGATILKMLEVEHPAAKVLVELAQLQD 379
+T ++G+T+ K++ +EHPA ++ QD
Sbjct: 90 LTAHDEGSTLQKIISIEHPAIVQTFSVSHFQD 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,790
Number of Sequences: 27780
Number of extensions: 339463
Number of successful extensions: 758
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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