Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I16
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0179 - 17604561-17606435                                         30   2.3  
09_02_0481 - 9772783-9773985                                           29   5.2  
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342...    28   9.1  
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824...    28   9.1  

>06_03_0179 - 17604561-17606435
          Length = 624

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +1

Query: 127 PPAPASWNYPRTA*ALLTKTSRTNCTTASSPVT----TTVLYVRAWNTRAKARXSIVQNV 294
           P   AS   P+T   L   TS  + ++++SP +      VLY RAW    +++  ++ N 
Sbjct: 312 PHPSASSPEPKTTEELAAVTSSKSSSSSTSPCSRIHEVVVLYKRAWKVVYRSKQLLLTNF 371

Query: 295 VNNLII 312
           + ++++
Sbjct: 372 LESVVV 377


>09_02_0481 - 9772783-9773985
          Length = 400

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 606 AEALMFWXGSSEAVLAGDAAIYFRGSGASAVIYRQFSHXEGL--VVEP 469
           A+A ++W   S AVL G   + F G  A A + R+  +  GL  V+EP
Sbjct: 34  ADAFLYWVNESAAVL-GVPKMSFFGISAFAQVMRELRNRHGLCAVMEP 80


>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
            26834330-26834732,26834840-26835118,26835285-26835716,
            26836362-26836838,26837171-26837212,26837285-26837545,
            26837637-26838938,26839146-26839575,26839643-26840046,
            26840360-26840716,26840842-26841102,26841494-26842141,
            26842231-26842452,26842547-26842768,26842860-26843009,
            26843739-26844111,26844467-26844689,26845167-26845425,
            26845585-26845920,26846013-26846999,26848395-26849624,
            26849706-26849768,26849858-26849910,26849998-26850079,
            26850520-26850588,26851070-26851129,26851205-26851267,
            26851993-26852101,26852742-26852827,26853120-26853847,
            26854613-26854676
          Length = 3716

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -3

Query: 203  VQFVLEVLVRRAHAVRG*FHDAGAGGEHAHCEHNEKFHFVRSLFRSLSRL 54
            +++  ++LV   H++    H       HA   ++ + HFV  +  SLSRL
Sbjct: 1836 IRYTKKILVEEGHSIPNMIHIFQLIVRHADLFYSCRAHFVPQMVNSLSRL 1885


>07_03_0906 +
           22481456-22481802,22482105-22482186,22482299-22482400,
           22483005-22483315,22483948-22484044,22484522-22484696,
           22485074-22485150,22485632-22486027,22486254-22486303,
           22487315-22487382,22488142-22488701
          Length = 754

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -2

Query: 291 ILNDAXPGLGSRIPSSYVQHCRSHR*GCCCTVC---PRGLG*K 172
           + N A  G G  +PS        HR GC C VC   P G G K
Sbjct: 592 LANLAILGEGESLPSQPTTRHPRHRPGCSCIVCIQPPSGKGPK 634


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,941,838
Number of Sequences: 37544
Number of extensions: 367866
Number of successful extensions: 1219
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)