Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I15
         (966 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    31   1.0  
01_05_0560 - 23288078-23288370,23288448-23288733                       30   3.2  
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231...    29   4.2  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   7.3  
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     29   7.3  
12_01_0465 + 3640736-3640817,3640898-3641088,3641266-3641789,364...    28   9.7  

>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 239  PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 379
            P  P T  H I  S +DD+     R  VR   +P+N ++ +  S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +2

Query: 236 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 328
           +PR P  A H +L S  DDV  DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149


>01_06_0359 +
           28722524-28722613,28722794-28722863,28723062-28723159,
           28724029-28724167,28724243-28724370,28724500-28724592,
           28724707-28724757,28725405-28725470,28725568-28725633,
           28725900-28725977,28726248-28726427,28726502-28726577,
           28726660-28726823,28727569-28727931
          Length = 553

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 400 ADREPP*HKGPAVFVPSRETACSTLPPFNPKPIYIDMGN 516
           A+ E P  + PAV VPS E     +PP  PKP  +D G+
Sbjct: 317 AEEEKPQIEEPAVAVPSTE----VVPPPPPKPEVVDTGD 351


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 17/65 (26%), Positives = 18/65 (27%)
 Frame = +1

Query: 718  PFXPXXSPYCTPSYXXCXXLRLPRPXPXSXPXXXXPPXXXTPXXXPPXSSXLXXXXAXPX 897
            P  P  SP C P          P P P   P    PP        PP           P 
Sbjct: 1147 PPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPP 1206

Query: 898  ALXPP 912
             + PP
Sbjct: 1207 PIPPP 1211


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 22/77 (28%), Positives = 23/77 (29%)
 Frame = -2

Query: 944 GXXRXGRRXXXGGXRAXGXAXXXXXXEEXGGXKXGVXXXGGXXXXGXEXGXGRGRRXXXQ 765
           G    G R   GG    G           GG   G    GG    G E G GRG     +
Sbjct: 39  GVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGYGGGGR 98

Query: 764 XX*DGVQXGLXMGXNGH 714
               G   G   G  GH
Sbjct: 99  GYESGGGRGPGGGGRGH 115


>12_01_0465 +
           3640736-3640817,3640898-3641088,3641266-3641789,
           3643726-3644029
          Length = 366

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 395 DQPIESHRNTRDLRFLYPRGKLPVQRFLRLTPSQYILI 508
           D+P ++  N R   FL+  G  P++    LTP Q  LI
Sbjct: 196 DKPSQTCLNKRQREFLHALGLTPIRGQKSLTPDQIALI 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,839,486
Number of Sequences: 37544
Number of extensions: 500630
Number of successful extensions: 1375
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)