Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I15
         (966 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530...    35   0.39 
AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.             35   0.39 
AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.     35   0.39 
U38904-1|AAA93261.1|  367|Homo sapiens zinc finger protein C2H2-...    31   6.3  
BC110856-1|AAI10857.1|  576|Homo sapiens ZNF211 protein protein.       31   6.3  
BC089440-1|AAH89440.1|  541|Homo sapiens ZNF211 protein protein.       31   6.3  
AB209847-1|BAD93084.1|  590|Homo sapiens zinc finger protein 211...    31   6.3  
AB209273-1|BAD92510.1|  567|Homo sapiens zinc finger protein 211...    31   6.3  
U43431-2|AAB03695.1|  976|Homo sapiens DNA topoisomerase III pro...    31   8.3  
U43431-1|AAB03694.1| 1001|Homo sapiens DNA topoisomerase III pro...    31   8.3  
DQ117529-1|AAZ20773.1|  670|Homo sapiens zinc finger protein pro...    31   8.3  
BT006853-1|AAP35499.1|  474|Homo sapiens zinc finger protein 256...    31   8.3  
BC051748-1|AAH51748.1| 1001|Homo sapiens topoisomerase (DNA) III...    31   8.3  
BC010996-1|AAH10996.2|  682|Homo sapiens zinc finger protein 16 ...    31   8.3  
BC001438-1|AAH01438.2|  627|Homo sapiens zinc finger protein 256...    31   8.3  
AL834451-1|CAD39111.1|  688|Homo sapiens hypothetical protein pr...    31   8.3  
AF244088-1|AAF75235.1|  671|Homo sapiens zinc finger protein pro...    31   8.3  

>BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530
           protein.
          Length = 599

 Score = 35.1 bits (77), Expect = 0.39
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S   F +RR   ++KP  CS+C +S
Sbjct: 437 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 471


>AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.
          Length = 557

 Score = 35.1 bits (77), Expect = 0.39
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S   F +RR   ++KP  CS+C +S
Sbjct: 395 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 429


>AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.
          Length = 573

 Score = 35.1 bits (77), Expect = 0.39
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S   F +RR   ++KP  CS+C +S
Sbjct: 411 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 445


>U38904-1|AAA93261.1|  367|Homo sapiens zinc finger protein C2H2-25
           protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S S  ++RR     +P  CSQC +S
Sbjct: 314 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 348


>BC110856-1|AAI10857.1|  576|Homo sapiens ZNF211 protein protein.
          Length = 576

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S S  ++RR     +P  CSQC +S
Sbjct: 523 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 557


>BC089440-1|AAH89440.1|  541|Homo sapiens ZNF211 protein protein.
          Length = 541

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S S  ++RR     +P  CSQC +S
Sbjct: 488 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 522


>AB209847-1|BAD93084.1|  590|Homo sapiens zinc finger protein 211
           isoform 2 variant protein.
          Length = 590

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S S  ++RR     +P  CSQC +S
Sbjct: 537 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 571


>AB209273-1|BAD92510.1|  567|Homo sapiens zinc finger protein 211
           isoform 2 variant protein.
          Length = 567

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           CS C K    S S  ++RR     +P  CSQC +S
Sbjct: 514 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 548


>U43431-2|AAB03695.1|  976|Homo sapiens DNA topoisomerase III protein.
          Length = 976

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +1

Query: 163  NTAPDNTYSATSWPGTAMAVSR*XCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 336
            NTAP  T  A SW G           S A+ +RP  SS +    A   KP+ CS CHQ
Sbjct: 914  NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 964


>U43431-1|AAB03694.1| 1001|Homo sapiens DNA topoisomerase III protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +1

Query: 163  NTAPDNTYSATSWPGTAMAVSR*XCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 336
            NTAP  T  A SW G           S A+ +RP  SS +    A   KP+ CS CHQ
Sbjct: 939  NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 989


>DQ117529-1|AAZ20773.1|  670|Homo sapiens zinc finger protein
           protein.
          Length = 670

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 330
           C+ C K  R S +  +++R  +  KP VCS+C
Sbjct: 311 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 342


>BT006853-1|AAP35499.1|  474|Homo sapiens zinc finger protein 256
           protein.
          Length = 474

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           C+ C K+   S S   +RR     +P  CS+C +S
Sbjct: 368 CNECGKFFSQSSSLIRHRRSHTGERPYECSECWKS 402


>BC051748-1|AAH51748.1| 1001|Homo sapiens topoisomerase (DNA) III
            alpha protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +1

Query: 163  NTAPDNTYSATSWPGTAMAVSR*XCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 336
            NTAP  T  A SW G           S A+ +RP  SS +    A   KP+ CS CHQ
Sbjct: 939  NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 989


>BC010996-1|AAH10996.2|  682|Homo sapiens zinc finger protein 16
           protein.
          Length = 682

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 330
           C+ C K  R S +  +++R  +  KP VCS+C
Sbjct: 323 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 354


>BC001438-1|AAH01438.2|  627|Homo sapiens zinc finger protein 256
           protein.
          Length = 627

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 339
           C+ C K+   S S   +RR     +P  CS+C +S
Sbjct: 521 CNECGKFFSQSSSLIRHRRSHTGERPYECSECWKS 555


>AL834451-1|CAD39111.1|  688|Homo sapiens hypothetical protein
           protein.
          Length = 688

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 330
           C+ C K  R S +  +++R  +  KP VCS+C
Sbjct: 329 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 360


>AF244088-1|AAF75235.1|  671|Homo sapiens zinc finger protein
           protein.
          Length = 671

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 235 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 330
           C+ C K  R S +  +++R  +  KP VCS+C
Sbjct: 312 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,794,763
Number of Sequences: 237096
Number of extensions: 2654141
Number of successful extensions: 11582
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11534
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)