Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I15
         (966 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical ...    31   1.6  

>AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical
           protein F42G2.2 protein.
          Length = 560

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +2

Query: 326 SVTNPENNEASIEHSHHTVDIGLDQPIESHRNTRDLRFLYPRGKLPVQRFLRLTPSQYIL 505
           ++T    N  SI H    ++ G    ++  RN +D+        +P + F     S YI 
Sbjct: 158 TLTELNINIHSIIHKPEIIEFGDIVEMDQWRNAKDIHLRNFFVSIPFEHFSHCE-SAYIE 216

Query: 506 IWETVTDDXRRRIK 547
           +W+   DD ++ IK
Sbjct: 217 VWKISADDIQKLIK 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,375,811
Number of Sequences: 27780
Number of extensions: 390233
Number of successful extensions: 1069
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)