Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I13
(991 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 65 6e-11
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 65 6e-11
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 62 8e-10
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 60 2e-09
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.034
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 34 0.14
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 34 0.18
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81127-4|CAB03389.1| 344|Caenorhabditis elegans Hypothetical pr... 30 2.2
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 30 2.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.1
U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical p... 29 5.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.1
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 29 5.1
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 29 6.8
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 29 6.8
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 29 6.8
AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 65.3 bits (152), Expect = 6e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*--------E 515
+KRE +FIT+K+WN++H + + L QL + Y E
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 516 RYLARH--VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
R+ VD+L+TW+ A+K G +SIG+SNF QIQR+ D+ KP+ LQ+E
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVE 184
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 134 IVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGI 313
+V +L+L+SG +IP + LGTW +P G+V A+ A+ AGY HID A+ Y
Sbjct: 1 MVQSLKLNSGYSIPAIGLGTWQS-KP-GEVAA-------AIKTAVAAGYRHIDCAHVYQN 51
Query: 314 EDQVGRALXQEIL 352
+ +VG AL +EIL
Sbjct: 52 QKEVGEAL-KEIL 63
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 448 LXNLNLEYVDLYLIHWP 498
L +L L YVDL LIHWP
Sbjct: 97 LSDLQLSYVDLMLIHWP 113
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 65.3 bits (152), Expect = 6e-11
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*--------E 515
+KRE +FIT+K+WN++H + + L QL + Y E
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 516 RYLARH--VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
R+ VD+L+TW+ A+K G +SIG+SNF QIQR+ D+ KP+ LQ+E
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVE 184
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 134 IVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGI 313
+V +L+L+SG +IP + LGTW +P G+V A+ A+ AGY HID A+ Y
Sbjct: 1 MVQSLKLNSGYSIPAIGLGTWQS-KP-GEVAA-------AIKTAVAAGYRHIDCAHVYQN 51
Query: 314 EDQVGRALXQEIL 352
+ +VG AL +EIL
Sbjct: 52 QKEVGEAL-KEIL 63
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 448 LXNLNLEYVDLYLIHWP 498
L +L L YVDL LIHWP
Sbjct: 97 LSDLQLSYVDLMLIHWP 113
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 61.7 bits (143), Expect = 8e-10
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 348 FSEG-LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*ERYL 524
F+EG LKRE IFITTK + + V ALR SL + +L + S +
Sbjct: 66 FAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDGSF 125
Query: 525 ARHVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
V D WRG LGLTK+IG+SNFN+ QI RI++ A Q+E
Sbjct: 126 RSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHASQLE 177
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +2
Query: 137 VPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIE 316
VP LS+G +P + LGTW +GK V + N A+ AGY HIDTA Y E
Sbjct: 5 VPIFTLSNGVLMPSIGLGTWQMTGEEGKTV-IRN--------AVLAGYRHIDTATLYQNE 55
Query: 317 DQVGRALXQ 343
Q+G AL +
Sbjct: 56 HQIGDALAE 64
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQ------LGIRRPVFDSLAHSYV*ERY 521
++RE +F+++K+WN+YH R + + + + L + + I P F ER
Sbjct: 70 VRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWP-FGWAEDEPPGERG 128
Query: 522 L--------ARH--VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSAL 671
L R+ VD+L+TW+ + DA + G +SIG++NFN Q++++ GL KP+ L
Sbjct: 129 LWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVL 188
Query: 672 QIE 680
Q+E
Sbjct: 189 QVE 191
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 134 IVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGI 313
I T+ L+SG +PV+ GTW PK + D ALEAGY HID+A +
Sbjct: 3 IADTVTLNSGYEMPVIGYGTW--QLPKNLAAERVRD-------ALEAGYRHIDSALSFKN 53
Query: 314 EDQVGRAL 337
+++V +
Sbjct: 54 QEEVAAGI 61
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 54.4 bits (125), Expect = 1e-07
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*E--RYLARH 533
+KRE +FITTK W ++ LR+SL K QL + ++ + ++A
Sbjct: 71 VKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASP 130
Query: 534 VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
V+ D WR K GL K++G+SN+N +QI R + GL Q+E
Sbjct: 131 VE--DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVE 177
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 143 TLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQ 322
+++LS+G +PV+ LGTW + +V AV A++AGY IDTA Y E+
Sbjct: 7 SIKLSNGVEMPVIGLGTW-----QSSPAEVIT----AVKTAVKAGYRLIDTASVYQNEEA 57
Query: 323 VGRALXQEILRRT*KRIYLY 382
+G A+ + + KR L+
Sbjct: 58 IGTAIKELLEEGVVKREELF 77
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 47.6 bits (108), Expect = 1e-05
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLG------IRRPV-----FDSLAHSY 506
LKRE IF+T+KL + H E V + L QL I P S A
Sbjct: 70 LKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPLM 129
Query: 507 V*ERYLARHVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
+ +DTWR + K G K++G+SNF+ Q+Q + D+ KP+ Q+E
Sbjct: 130 ENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVE 187
Score = 41.9 bits (94), Expect = 7e-04
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 131 LIVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIY--ALEAGYTHIDTAYK 304
+ V ++ L++G +P+ LGTW QV ++ E V AL+AGY IDTA+
Sbjct: 1 MTVDSIPLNTGAQLPLFGLGTW----------QVKDEAELTVALRAALDAGYRLIDTAHL 50
Query: 305 YGIEDQVGRALXQEILRRT*KRIYLYNYQALEFLPRERASDPSAEEVPXK 454
Y E +G+ L + I KR ++ L F P E K
Sbjct: 51 YQNEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLK 100
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 442 SPLXNLNLEYVDLYLIHWP 498
S L L LEY+DLYLIH P
Sbjct: 97 SQLKALQLEYIDLYLIHCP 115
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 146 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQV 325
L LS+ ++P V LGTW + D AV A++ GY+ IDTA Y E+ +
Sbjct: 48 LTLSNAHSMPAVGLGTWQSN---------AEDVISAVKAAVKNGYSLIDTASGYNNEEFI 98
Query: 326 GRALXQEILRRT*KRIYLY 382
G A+ + I KR L+
Sbjct: 99 GTAIKEVIAEGVVKREDLF 117
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 36.3 bits (80), Expect = 0.034
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +3
Query: 360 LKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*ERYLARHVD 539
LKRE IFITTK+ + E + + SL K+ + + Y + + + +
Sbjct: 66 LKREDIFITTKMHPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQDPMNKTLR 125
Query: 540 FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKP 662
+ TW + + K G +S+G+S+F ++ + D G P
Sbjct: 126 -IATWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFP 165
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 TLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVI-YALEAGYTHIDTAYKYGIED 319
+++L++G + P++ LGT+ ++ D V+ AL AGY DTA Y E
Sbjct: 2 SIKLNTGYDCPLIGLGTY----------KIIGDQVLPVLDAALTAGYRLFDTAKVYNNEK 51
Query: 320 QVGRAL 337
++G AL
Sbjct: 52 EIGDAL 57
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.034
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Frame = +3
Query: 303 NMESRTKWEGPXTKKFSE--GLKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRR 476
N+ + G KK+ GL RE +FITTK+ E + K L S ++
Sbjct: 55 NLYKNETFLGNSLKKYLPQFGLTREDVFITTKVRTL---NENTVEETEKQLANSLATLQT 111
Query: 477 PVFDSLAHSYV*ERYLARHVDF-------LDTWRGMIDAKKLGLTKSIGISNFNQEQIQR 635
D L Y +R D+ W+ + AK+ G +SIG+SN+ +
Sbjct: 112 DYVDLLLIHYPRDRDTGNDDDYEINKSRRKIVWQTLEKAKESGRVRSIGVSNYEVYHLVE 171
Query: 636 IIDSGLEKPSALQIE 680
+ + +P Q E
Sbjct: 172 MFEYAKIRPVLNQYE 186
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 134 IVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALE-AGYTHIDTAYKYG 310
++PT LS+ +P++ LGT AV+++++ GY IDTA +YG
Sbjct: 1 MIPTTVLSNNVEMPLIGLGT----------THSGGYYHDAVLHSIKKCGYRLIDTAKRYG 50
Query: 311 IEDQVGRAL 337
+E Q+G A+
Sbjct: 51 VEKQLGIAV 59
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +3
Query: 366 RESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*ERYLARHVDFL 545
RE +F++TKLW ++V A + S K Q + H ++ +
Sbjct: 66 REEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMY---MIHMPQLPDWIVNQKETK 121
Query: 546 D-TWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
+ TWR M + +SIG+SN++ E + +++ P A Q+E
Sbjct: 122 EKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVE 167
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/110 (23%), Positives = 50/110 (45%)
Frame = +3
Query: 351 SEGLKRESIFITTKLWNSYHEREQVIPALRKSLXKSQLGIRRPVFDSLAHSYV*ERYLAR 530
+ GLKRE I+IT+KL S ++ ++ +SL ++ + S + A
Sbjct: 64 ANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPAN 123
Query: 531 HVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 680
+++W M + G +S+G+SNF ++ + P+ Q+E
Sbjct: 124 KKLRVESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVE 173
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 167 NIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRAL 337
N+P++ +GTW VQ Q + + GY IDTA Y E ++GR L
Sbjct: 10 NMPLIGIGTWQ--------VQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRIL 58
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 448 LXNLNLEYVDLYLIHWP 498
L NL +EY+DL LIHWP
Sbjct: 96 LSNLKVEYLDLLLIHWP 112
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 546 DTWRGMIDAKKLGLTKSIGISNFNQEQIQ 632
D WR K GL K++G+SN+N +QI+
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVSNWNNDQIR 131
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 448 LXNLNLEYVDLYLIHWPIAMFEND 519
L L+LEYVDLYL H P A F +D
Sbjct: 70 LKKLHLEYVDLYLAHMPTA-FSDD 92
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 32.7 bits (71), Expect = 0.42
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 149 QLSSGGNIPVVALGTWLGHRPKGKVVQVTNDT-EQAVIYALEAGYTHIDTAYKYGIEDQV 325
+L+SG NIP V GT+ +VT + A+ AL AGY DTA Y E ++
Sbjct: 14 KLNSGYNIPFVGFGTY----------KVTGENVPPAIDAALTAGYRMFDTAKYYLNEKEL 63
Query: 326 GRAL 337
G AL
Sbjct: 64 GEAL 67
>Z81127-4|CAB03389.1| 344|Caenorhabditis elegans Hypothetical
protein T22G5.4 protein.
Length = 344
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 733 VVFAAELEELCCCRLRFNSICKAEGF--SSPLSMILWICSWLKLEMPMDL 590
V+ AEL+ L RLRF S+ E F + P S+ + SWL L M +DL
Sbjct: 51 VINIAELKTLIF-RLRFQSLNGRECFLYNIPYSLAIMFQSWLFLSMALDL 99
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 149 QLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVG 328
+L +G IP +ALGT+ KG + AV AL+ GY DTA Y E +G
Sbjct: 3 KLKNGQEIPKLALGTY---EAKG------DQLFAAVDEALKVGYRSFDTAKYYENEKDLG 53
Query: 329 RAL 337
AL
Sbjct: 54 LAL 56
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +3
Query: 762 AXVPXXAXPSXPXXXXXXXXXPXSPXSXXXXXPXXXXPPXXPPXXPXXFPXXXXXXXXPP 941
A P P P P P P PP PP P P PP
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPP 762
Query: 942 PXXXXXPXP 968
P P P
Sbjct: 763 PPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +3
Query: 762 AXVPXXAXPSXPXXXXXXXXXPXSPXSXXXXXPXXXXPPXXPPXXPXXFPXXXXXXXXPP 941
A P P P P P P PP PP P P PP
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPP 762
Query: 942 PXXXXXPXP 968
P P P
Sbjct: 763 PPPGGCPPP 771
>U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical
protein ZK1290.9 protein.
Length = 360
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 453 KSQLGIRRPVFDSL-AHSYV*ERYLARHVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQI 629
KS G ++ + +S H Y+ R FLD +I + T+S GI + + ++I
Sbjct: 151 KSSSGYKKIILNSFDVHHYLLARNGTNEEQFLDHLIEIIKSSNKFTTRSFGIGDLSFDKI 210
Query: 630 QRIIDSGLEKPSALQ 674
R ++ L +P +L+
Sbjct: 211 ARFLE--LMEPKSLE 223
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +3
Query: 762 AXVPXXAXPSXPXXXXXXXXXPXSPXSXXXXXPXXXXPPXXPPXXPXXFPXXXXXXXXPP 941
A P P P P P P PP PP P P PP
Sbjct: 288 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP--PGGLPPISGGPPPPP 345
Query: 942 PXXXXXPXP 968
P P P
Sbjct: 346 PPPGGCPPP 354
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -1
Query: 328 SHLVLDSIFVCGVYVCVSSFQRVYDSLLCVIGYLN 224
++LV DSIF+ ++ +S Q + S++C++GYL+
Sbjct: 309 NNLVCDSIFLSVWHLIISFVQTM--SIICIVGYLS 341
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 587 HQIHRHLQL*PRTNPEDHRQRTGETFGFTDRVKPQ 691
HQ H H PR +P +R +TF FT +KPQ
Sbjct: 82 HQNHNHPS--PRKSPGFRFRRIFDTFTFTKSLKPQ 114
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 478 LYLIHWPIAMFENDTLLDTWTFWTRG 555
LYL+HWPI F T D + +T G
Sbjct: 283 LYLVHWPIYAFSKLTYGDNYYAFTGG 308
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 342 WXRALPTWSSIPYLYAVSMC-VYPASNAYMTACSVSLVT*TTFPLGRCPSHVPSATTGM 169
W ALP ++ +P + + C + NA+ AC+ +++ T+ L R PS + S T +
Sbjct: 215 WRVALPVFA-LPIVARMCGCPMDKLKNAHNYACTGTMIFIATYMLYRAPSLIKSTKTAL 272
>AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical
protein F52H2.4 protein.
Length = 446
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 92 LFCLSALCFTSADLIVPTLQLSSGGNIPV 178
LFC+ + + S L P+L ++S NIP+
Sbjct: 51 LFCVQMILYNSVALYAPSLAIASITNIPI 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,391,505
Number of Sequences: 27780
Number of extensions: 416048
Number of successful extensions: 1234
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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