Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I13
(991 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 28 0.15
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 28 0.15
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 27 0.35
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.60
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 25 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 5.6
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 7.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 7.4
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 7.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 7.4
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 9.8
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.9 bits (59), Expect = 0.15
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 244 RASCHIRVGSWIHTHRHRIQIWNRGPSGKG 333
R CHI + S+ +T R WN GP+ G
Sbjct: 149 RQLCHIEIESFGYTMRDIRYKWNEGPNSVG 178
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.9 bits (59), Expect = 0.15
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 244 RASCHIRVGSWIHTHRHRIQIWNRGPSGKG 333
R CHI + S+ +T R WN GP+ G
Sbjct: 88 RQLCHIEIESFGYTMRDIRYKWNEGPNSVG 117
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 26.6 bits (56), Expect = 0.35
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 321 WSSIPYLYAVSMCVYPASNAYMTACSVSLVT*TTFPLGR 205
WS PY++ + C+ S A T+ + +++T T F + R
Sbjct: 115 WSHFPYVFGEAFCII-QSFAAETSANATVLTITAFTVER 152
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.8 bits (54), Expect = 0.60
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 599 RHLQL*PRTNPEDHRQRTGETFGFTDRVKPQPATTELFKF 718
RH+++ N ++ QR FG TD + +P T + KF
Sbjct: 209 RHMEVIKIKNFDNCDQRINYHFGMTDNSRLEPGTNKNGKF 248
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 24.6 bits (51), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 518 IPCSTRGLSGHVAGYDRR*EARPHQIHRHLQL*PRTN 628
IPC RGL + G++ E P ++ L L R++
Sbjct: 113 IPCEHRGLVSIIDGWELNGEVFPSKMDHQLPLKQRSS 149
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 4.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 244 RASCHIRVGSWIHTHRHRIQIWNRGPSGKG 333
R CHI + S+ +T R WN G G
Sbjct: 149 RQLCHIEIESFGYTMRDIRYKWNAGLQSVG 178
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 5.6
Identities = 11/43 (25%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 430 GITCSLSW*EFQSLVV-IKIDSLLSPSENFLVQGPSHLVLDSI 305
G+ +++ ++ ++ V + D++ P E+F G ++VLD+I
Sbjct: 169 GVEIGINFDKYDNIQVNVSGDNVPQPIESFEAAGLRNIVLDNI 211
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 7.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 36 LKIWAIWSFHSQWTSGPV 89
++I AIW F WT P+
Sbjct: 170 IRIIAIWLFSLGWTIAPM 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 7.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 253 CHIRVGSWIHT 285
C I GSW+H+
Sbjct: 183 CRINFGSWVHS 193
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.2 bits (45), Expect = 7.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 573 KKLGLTKSIGISNFNQEQIQRIIDSGLEKP 662
K GLTK++ I N+N + + I+ S P
Sbjct: 94 KLYGLTKNLEIKNYNIDWDKCILSSESYNP 123
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.2 bits (45), Expect = 7.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 36 LKIWAIWSFHSQWTSGPV 89
++I AIW F WT P+
Sbjct: 46 IRIIAIWLFSLGWTIAPM 63
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 36 LKIWAIWSFHSQWTSGP 86
++I AIW F WT P
Sbjct: 136 IRIIAIWLFSLGWTIAP 152
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,659
Number of Sequences: 438
Number of extensions: 5919
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32774469
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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