Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I12
         (1004 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             30   2.5  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   3.3  
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726...    29   7.7  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = +2

Query: 803 PXXXGGXG-FXXPXKTTPPPPXXXAXLXFWGPXXXXPPPPXXPXXPAXXXXRQ 958
           P   GG G F  P    PPPP   +      P    PPPP  P  P     R+
Sbjct: 79  PPRLGGDGMFRRPPPPPPPPPSSGSP-----PPPPPPPPPPPPPPPPPLFTRR 126


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/55 (29%), Positives = 19/55 (34%)
 Frame = +2

Query: 773 PXLPFXFLRXPXXXGGXGFXXPXKTTPPPPXXXAXLXFWGPXXXXPPPPXXPXXP 937
           P LP   +  P          P ++ PPPP     L         PPPP  P  P
Sbjct: 592 PPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLP 646


>06_01_0944 +
           7264833-7265120,7265511-7265600,7265702-7265798,
           7265927-7265988,7266508-7266596,7266702-7266822,
           7266915-7267058,7267492-7267820,7268154-7268394,
           7269042-7269245,7271150-7271619,7272703-7272746,
           7273121-7273211,7273494-7273596,7273682-7273783,
           7274214-7274300,7274421-7274531
          Length = 890

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +1

Query: 733 PPXTPPXXX-XXPPPXPXLXFFTGSRXXGXGXFF 831
           PP TPP      PPP P + F  G      G +F
Sbjct: 581 PPCTPPVRSIAPPPPPPPMSFLAGRLAAKEGAYF 614


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,044,777
Number of Sequences: 37544
Number of extensions: 329127
Number of successful extensions: 1276
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2952114480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)