Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I10
(918 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 276 2e-74
SB_56| Best HMM Match : Actin (HMM E-Value=0) 276 2e-74
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 276 2e-74
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 275 3e-74
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 243 1e-64
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 1e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 137 1e-32
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 9e-31
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 1e-28
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 122 3e-28
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 91 2e-18
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 9e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 48 1e-05
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 1e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 45 1e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 39 0.007
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.007
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 36 0.035
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 36 0.035
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 36 0.061
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 35 0.11
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 34 0.14
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 34 0.14
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 34 0.14
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 33 0.24
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 33 0.32
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.32
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 32 0.56
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 32 0.56
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.56
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 32 0.56
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 32 0.75
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_40706| Best HMM Match : Extensin_2 (HMM E-Value=7.9) 31 0.99
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.99
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.99
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_32646| Best HMM Match : IQ (HMM E-Value=8.5e-07) 25 1.7
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.7
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 1.7
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.7
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 31 1.7
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 31 1.7
SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 31 1.7
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.3
SB_12656| Best HMM Match : CS (HMM E-Value=0.0018) 30 2.3
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 30 2.3
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.3
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 30 3.0
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 30 3.0
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 29 4.0
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 29 4.0
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 5.3
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 5.3
SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 29 5.3
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 5.3
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 7.0
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 29 7.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 29 7.0
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 7.0
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 29 7.0
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 7.0
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 7.0
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 29 7.0
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 7.0
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 9.2
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 9.2
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 28 9.2
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 28 9.2
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 28 9.2
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 28 9.2
SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14) 28 9.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 276 bits (677), Expect = 2e-74
Identities = 131/149 (87%), Positives = 136/149 (91%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 430
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 431 PEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 610
PEEHP P P+ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 PEEHPVLLT-EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Query: 611 DGVSHTVPIYEGYALPHAILRLDLAGXDL 697
DGV+HTVPIYEGYALPHAILRLDLAG DL
Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 142 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 276 bits (677), Expect = 2e-74
Identities = 131/149 (87%), Positives = 136/149 (91%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 430
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 431 PEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 610
PEEHP P P+ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 PEEHPVLLT-EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Query: 611 DGVSHTVPIYEGYALPHAILRLDLAGXDL 697
DGV+HTVPIYEGYALPHAILRLDLAG DL
Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDLAGRDL 185
Score = 88.2 bits (209), Expect = 8e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 142 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 276 bits (677), Expect = 2e-74
Identities = 131/149 (87%), Positives = 136/149 (91%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 430
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 431 PEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 610
PEEHP P P+ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLT-EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 611 DGVSHTVPIYEGYALPHAILRLDLAGXDL 697
DGV+HTVPIYEGYALPHAILRLDLAG DL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDL 186
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 136 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 275 bits (675), Expect = 3e-74
Identities = 130/149 (87%), Positives = 136/149 (91%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 430
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 431 PEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 610
PEEHP P P+ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLT-EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 611 DGVSHTVPIYEGYALPHAILRLDLAGXDL 697
DGV+HTVPIYEGYALPHAI+RLDLAG DL
Sbjct: 158 DGVTHTVPIYEGYALPHAIIRLDLAGRDL 186
Score = 89.8 bits (213), Expect = 3e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1
Query: 136 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 243 bits (595), Expect = 1e-64
Identities = 117/136 (86%), Positives = 122/136 (89%), Gaps = 2/136 (1%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 430
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 431 PEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 610
PEEHP P P+ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 99 PEEHPVLLT-EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 611 DGVSHTVPIYE--GYA 652
DGVSHTVPIYE GY+
Sbjct: 158 DGVSHTVPIYEERGYS 173
Score = 89.8 bits (213), Expect = 3e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +1
Query: 136 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 147 bits (356), Expect = 1e-35
Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Frame = +2
Query: 287 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPXPAH*G 463
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLT-E 111
Query: 464 LPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 643
P P NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YE
Sbjct: 112 PPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYE 171
Query: 644 GYALPHAILRLDLAGXDL 697
G+ALPH RLD+AG D+
Sbjct: 172 GFALPHLTRRLDIAGRDI 189
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 154 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 252
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 137 bits (332), Expect = 1e-32
Identities = 64/105 (60%), Positives = 78/105 (74%)
Frame = +2
Query: 389 KIWHHTFYNELRVAPEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQAVLSL 568
K+W H F ++LRV E+ P P P+ NRE+M Q+MFE+FN P MYVA+QAV++L
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLT-EAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMAL 2187
Query: 569 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGXDLXH 703
YASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAG DL H
Sbjct: 2188 YASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTH 2232
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 160 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 261
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 131 bits (316), Expect = 9e-31
Identities = 61/71 (85%), Positives = 67/71 (94%)
Frame = +2
Query: 485 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 664
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 665 ILRLDLAGXDL 697
I+RLDLAG DL
Sbjct: 138 IIRLDLAGRDL 148
Score = 100 bits (239), Expect = 2e-21
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +2
Query: 251 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 409
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 88.2 bits (209), Expect = 8e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 142 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 264
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (299), Expect = 1e-28
Identities = 51/77 (66%), Positives = 68/77 (88%)
Frame = +2
Query: 467 PSTPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 646
P PR NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG
Sbjct: 135 PLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEG 194
Query: 647 YALPHAILRLDLAGXDL 697
+A+PH+I+R D+AG D+
Sbjct: 195 FAMPHSIMRTDIAGRDV 211
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 122 bits (295), Expect = 3e-28
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +2
Query: 506 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 685
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 686 GXDL 697
G DL
Sbjct: 61 GRDL 64
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 90.6 bits (215), Expect = 2e-18
Identities = 43/114 (37%), Positives = 70/114 (61%)
Frame = +2
Query: 347 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPXPAH*GLPSTPRANREKMTQIMFETFN 526
PI+ G++ +WD EKI + + ++ HP +T R REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNT-RIKREKLTELMFEKYN 61
Query: 527 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 688
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG
Sbjct: 62 VPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 145 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 261
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 9e-08
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +2
Query: 275 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 442
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDH 332
Score = 32.3 bits (70), Expect = 0.56
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 587 TGIVLDSGDGVSHTVPI 637
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 518 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGXD 694
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AG D
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 695 L 697
+
Sbjct: 98 I 98
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 130 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 255
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 551 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGXDL 697
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHL 815
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 44.8 bits (101), Expect = 1e-04
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Frame = +2
Query: 296 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPXPAH*GLP 469
++GD+ + + L Y P + G + NWD ++IW +TF E GL
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------GL- 317
Query: 470 STPRANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTV 631
+ M +I+FE +N A+ A LS Y S +V+D+G +H V
Sbjct: 318 ------EDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIV 371
Query: 632 PIYEGYALPHAILR 673
P++ G + A+ R
Sbjct: 372 PVFNGKVIKKAVRR 385
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 148 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 267
++A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -1
Query: 258 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 142
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 43.2 bits (97), Expect = 3e-04
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRP-PCTSPS--KPCSRCTR 575
P+T S +P + TP T +P P PT + P + T+P P T+P+ KP
Sbjct: 56 PTTPSPTAPTQTTP---TPATPTPTTPTPKT-PTPTTSTLTKPTPATTPTPTKPTPTAHT 111
Query: 576 PVVPPVSCWTPATVSP-TPYPS--TRDTHSPTPSCVWTWPVXIS 698
P P + TP +P TP P+ T H+PT T+ + +S
Sbjct: 112 PTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPTTFILLLS 155
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
P+T + +P + TP T +P P PT+ P + T P +P+ S T+P
Sbjct: 41 PTTPTSTAPTQTTP---TPTTPSPTAPTQTT-PTPATPTPTTPTPKTPTPTTSTLTKPT- 95
Query: 585 PPVSCWTPATVSPTPYPSTRDTHSPT 662
P + TP PTP T T +PT
Sbjct: 96 -PAT--TPTPTKPTPTAHTPTTPTPT 118
Score = 37.9 bits (84), Expect = 0.011
Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Frame = +3
Query: 426 SPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT 605
+P + TP T P P PT P + T P SP+ P P P + T
Sbjct: 25 TPTKPTPTTHTPTKPSPTTPTSTA-PTQTTPTPTTP---SPTAPTQTTPTPATPTPTTPT 80
Query: 606 PATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIP-PHDXXSPXP-XRXXXFPTPR 764
P T PTP ST PTP+ T P P H +P P PTP+
Sbjct: 81 PKT--PTPTTST--LTKPTPA---TTPTPTKPTPTAHTPTTPTPTAHTPTKPTPK 128
Score = 32.7 bits (71), Expect = 0.43
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 432 PRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA 611
P T LT+ +PQ PT + P + T+P T+P+ T P P TP+
Sbjct: 8 PTLTTPTLTKATPQTT-PTPTK-PTPTTHTPTKPSPTTPTSTAPTQTTPT--PT---TPS 60
Query: 612 TVSP---TPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPTP 761
+P TP P+T +PTP P + P +P P + PTP
Sbjct: 61 PTAPTQTTPTPATPTPTTPTPKT--PTPTTSTLTKPTPATTPTPTK----PTP 107
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +3
Query: 405 PSTMSCVSPPR--NTPXL-LTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCT 572
PST S S PR +TP T +P P P P + HST ++PS P + CT
Sbjct: 21 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCT 80
Query: 573 RPVVP--PVSCWTPATVSPTPYPSTRDTHSPTPS 668
P P P + TP+T S PST T S TPS
Sbjct: 81 -PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 38.7 bits (86), Expect = 0.007
Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV 581
PST S S P +T G+P P P+ P + S ST P T PS P +R T P
Sbjct: 147 PSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLST--PST-PSTPSTRST-PS 202
Query: 582 VPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPT 758
P TP+T+S PS +T S TPS T + I P +P P+
Sbjct: 203 TPSTPS-TPSTLSMPSTPSMPNTPS-TPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPS 259
Score = 37.9 bits (84), Expect = 0.011
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 402 IPSTMSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 578
+P+T S S P +T G+P P P+ P + S ST P T PS P +R T P
Sbjct: 696 MPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLST--PST-PSTPSTRST-P 751
Query: 579 VVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPT 758
P TP+T+S PS +T S TPS T + I P +P P+
Sbjct: 752 STPSTPS-TPSTLSMPSTPSMPNTPS-TPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPS 809
Score = 36.7 bits (81), Expect = 0.026
Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 IPSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV 581
+P+T S S P +TP L+ P P+ P + S ST ++PS P + CT P
Sbjct: 221 MPNTPSTPSTP-STPSTLSTPIT-PSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PN 277
Query: 582 VPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFP-T 758
P TP+T S PST T S TPS T + P +P + P T
Sbjct: 278 TPS----TPSTPSMPSTPSTPSTPS-TPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCT 332
Query: 759 PRXXXENXSXI 791
P N I
Sbjct: 333 PNTPSTNRKKI 343
Score = 36.7 bits (81), Expect = 0.026
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 399 IIPSTMSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCT- 572
II ST S P T +P+ P P+ P + S ST +PS PC+ T
Sbjct: 372 IITSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTP 431
Query: 573 -RPVVP--PVSCWTPATVSPTPYPSTRDTHSPTPS 668
P P P + TP+T S T PST T S TPS
Sbjct: 432 GTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS-TPS 465
Score = 36.3 bits (80), Expect = 0.035
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Frame = +3
Query: 402 IPSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV 581
+P+T S S P +TP L+ P P+ P + S ST ++PS P + CT P
Sbjct: 771 MPNTPSTPSTP-STPSTLSTPIT-PSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PN 827
Query: 582 VPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFP-T 758
P TP+T S PST T S TPS T + P +P + P T
Sbjct: 828 TPS----TPSTPSMPSTPSTPSTPS-TPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCT 882
Query: 759 PRXXXENXSXIS 794
P N S
Sbjct: 883 PNTPSTNRKSTS 894
Score = 35.5 bits (78), Expect = 0.061
Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +3
Query: 408 STMSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
ST S S P T +P P P+ P + S ST ++PS P + T P
Sbjct: 64 STPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPST-PST 122
Query: 585 P--PVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSP 728
P P + TP+T S PST T S TPS T + I P +P
Sbjct: 123 PSTPSAPSTPSTPSTPSTPSTPSTPS-TPSTPSTPSTPSTPITPGTPSTP 171
Score = 34.3 bits (75), Expect = 0.14
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV 581
PST S S P T +P P P+ P + S ST ++PS P + T P
Sbjct: 81 PSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPST-PS 139
Query: 582 VP--PVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSP 728
P P + TP+T S PST T TPS T + I P +P
Sbjct: 140 TPSTPSTPSTPSTPSTPSTPSTPITPG-TPSTPSTPSAPGTPITPSTLSTP 189
Score = 29.1 bits (62), Expect = 5.3
Identities = 26/76 (34%), Positives = 32/76 (42%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWT 680
P + S ST +PS P + CT P P TP+T PST THS TPS T
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCT-PSTPS----TPSTPITPSTPSTPCTHS-TPSAPST 71
Query: 681 WPVXISXIPPHDXXSP 728
+ P +P
Sbjct: 72 PSTPSTPCTPSTPSTP 87
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 38.7 bits (86), Expect = 0.007
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 417 SCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSK-HSTRP--PCTSPSKPCSRCTRPVVP 587
S +PP++ P L T S QP P+S S HS +P P PS ++P VP
Sbjct: 260 SSAAPPQSLPGLQTSPSLQPPSQRSTPSPQSMSALHSGKPKRPGMPPSPSVPHQSQPAVP 319
Query: 588 PVSCWTPATVSPTP 629
P P + + TP
Sbjct: 320 PAFATPPRSGASTP 333
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 38.7 bits (86), Expect = 0.007
Identities = 31/111 (27%), Positives = 40/111 (36%)
Frame = +3
Query: 426 SPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT 605
+P T T +P+P P P PP P P + TRP VP
Sbjct: 887 NPKTTTAPPTTPTTPKPTTPAP---PPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQ 943
Query: 606 PATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPT 758
+T PTP P T P P+ P + +PP P P + PT
Sbjct: 944 ASTTRPTPPPPTSALPPPIPA-TQVPPPPLPPLPP----PPPPVQTTTAPT 989
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 402 IPSTMSC-VSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 578
+P+T + S R TP T P P T+ P PP P P T P
Sbjct: 936 VPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPP-------PLPPLPPPPPPVQTTTAP 988
Query: 579 VVPPVSC 599
+PP SC
Sbjct: 989 TLPPASC 995
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = +3
Query: 420 CVSPPRNTPXLL--TEGSPQPQGPTERR*PRSCSKHSTRPPCTS--PSKPCSRCTRPVVP 587
C P P LL T P P P +++ +CS S CT P K CS+ T+
Sbjct: 1841 CCKQPEPQPALLSTTPTPPPPPQPHQQQQQPTCST-SCLTLCTPDCPKKCCSKPTKVGSA 1899
Query: 588 PVSCWTPATVSPTPYPS 638
P S P++ PS
Sbjct: 1900 PTSSQCPSSCLLACQPS 1916
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 36.3 bits (80), Expect = 0.035
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 468 PQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPYPS 638
P P T P + + +T P T+P R T PV TP T +P TP +
Sbjct: 155 PSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTTPETTTPRTT 214
Query: 639 TRDTHSP 659
T +T +P
Sbjct: 215 TPETTTP 221
Score = 34.3 bits (75), Expect = 0.14
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Frame = +3
Query: 408 STMSCVSPPRNTPXLLTEGSPQPQGPT----ERR*PRSCSKHSTRPPCTSPSKPCSRCTR 575
ST + PP + P T +P+ P E P + + +T P T+P T
Sbjct: 146 STTKYIPPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTT 205
Query: 576 PVVPPVSCWTPATVSP--------TPYPSTRDTHSPTPS 668
P TP T +P P P T T S PS
Sbjct: 206 PETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPS 244
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 36.3 bits (80), Expect = 0.035
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +3
Query: 408 STMSCVSPPRNTPXLLTEGSPQPQGPTERR*-PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
ST + PP + P T + P+ R P + + +T P T+P R T P
Sbjct: 1760 STTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPETTKPRTTTPKT 1819
Query: 585 PPVSCWTPATVSPTPYPSTRDTHSPT 662
T A +P P +H+P+
Sbjct: 1820 TTPKKTTAAKKAPLPVTHATTSHAPS 1845
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 35.5 bits (78), Expect = 0.061
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPYPSTRDTHSPTP 665
PR KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 200 PRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
Query: 666 -SCVWTWPVXISXIP----PHDXXSPXPXRXXXF-PTPRXXXENXS 785
+ + P + IP PH P P PTP ++ S
Sbjct: 260 HTSIPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTPHPTYKHPS 305
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 34.7 bits (76), Expect = 0.11
Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 1/110 (0%)
Frame = +3
Query: 429 PPRNTPX-LLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT 605
PP P S QP P+ P ++T P S S P P +PP + T
Sbjct: 876 PPSPQPTQFYNPASYQPSAPSSMPAPVPLQPYNTPMPPIS-STPYQ--APPTLPPTTLTT 932
Query: 606 PATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFP 755
P+ P P PS + P P + P I P S P FP
Sbjct: 933 PSWSQPVPVPS---MYQPQPPGIMQPPTSIPPSQPMAPPSFPPSSMGGFP 979
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 34.7 bits (76), Expect = 0.11
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 6/123 (4%)
Frame = +3
Query: 414 MSCVSPPRNTPXLLTEGSP--QPQGPTERR*P--RSCSKHSTRPPCTSPSKPCSRCTRPV 581
M PPR + P +P GPTE+ P R S S +P P KP +
Sbjct: 997 MQPAKPPRQHTQCSIDPVPHLKPPGPTEQPVPPKRKASPPSAQP-LPPPRKPSPPPSAVP 1055
Query: 582 VPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIP--PHDXXSPXPXRXXXFP 755
+PP +P P P P R P+ S P IP P P P + P
Sbjct: 1056 IPPPRKPSPPPSEPAPPP--RQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTP 1113
Query: 756 TPR 764
PR
Sbjct: 1114 APR 1116
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 34.7 bits (76), Expect = 0.11
Identities = 46/167 (27%), Positives = 55/167 (32%), Gaps = 3/167 (1%)
Frame = +3
Query: 426 SPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT 605
SPPR P SP P R P S ++ T PP PS P + P PP
Sbjct: 260 SPPRYPP------SPLRYPPIPPRYPPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRY 313
Query: 606 PATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIP-PHDXXSPXPXRXXXFPTPRXXXENX 782
P SP YP + + P PS +P P H P P R P PR +
Sbjct: 314 PQ--SPLRYPPSPIRYPPLPS---RYPPSPPRYPSSHPRYPPSPPRYPPSP-PRYPSSHP 367
Query: 783 SXISRKNLXXXXPSNFXPGKWAPXXFHHP--PPKXFXKXPXXXRVXP 917
P + P + HP PP P R P
Sbjct: 368 RYPPSPLRYLPSPIRYPPSH-SRYPSSHPRYPPSHLRYPPSSLRYLP 413
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 34.3 bits (75), Expect = 0.14
Identities = 35/111 (31%), Positives = 40/111 (36%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTP 608
PP+N P GS P P R P S S + PP P SR P PP P
Sbjct: 265 PPKNAPPPPKRGSSNPPPPPTRG-PPSNSFTTQGPPL-----PPSRDQAPAPPP-----P 313
Query: 609 ATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPTP 761
+P P P +RD P P P+ PP S P P P
Sbjct: 314 LNATPPPPPPSRD-QVPLPPP----PLRGQIAPPPPPISKPPTSTRSAPPP 359
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 34.3 bits (75), Expect = 0.14
Identities = 35/111 (31%), Positives = 40/111 (36%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTP 608
PP+N P GS P P R P S S + PP P SR P PP P
Sbjct: 177 PPKNAPPPPKRGSSNPPPPPTRG-PPSNSFTTQGPPL-----PPSRDQAPAPPP-----P 225
Query: 609 ATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPTP 761
+P P P +RD P P P+ PP S P P P
Sbjct: 226 LNATPPPPPPSRD-QVPLPPP----PLRGQIAPPPPPISKPPTSTRSAPPP 271
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 34.3 bits (75), Expect = 0.14
Identities = 40/120 (33%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
PS VS P +TP + T P P S S PP ++PS T
Sbjct: 396 PSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPP--VSTPSNTPPVSTPSHTPPVSTPSHT 453
Query: 585 PPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXI-SXIPPHDXXSPXPXRXXXFPTP 761
PPVS TP+ P PS S TPS T PV S PP S P TP
Sbjct: 454 PPVS--TPSHTPPVSTPSHTPPVS-TPS--HTPPVSTPSNTPPVFTPSHTPPVFTPSHTP 508
Score = 33.1 bits (72), Expect = 0.32
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
PS VS P NTP + T P P S +S PP ++PS T
Sbjct: 477 PSHTPPVSTPSNTPPVFTPSHTPPVFTPSHTPPVSTPSNS--PPVSTPSNTLPVFTPSHT 534
Query: 585 PPVSCWTPATVSP 623
PPVS TP+ P
Sbjct: 535 PPVS--TPSHTPP 545
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 34.3 bits (75), Expect = 0.14
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Frame = +1
Query: 310 GTEQKRYPDPQ--IPHRTRNRH*LG*HGEDLASYLLQ*AACRPRGTPRSCSLR-APLNPK 480
G ++ PD + RT H LG + L + P S R AP +P
Sbjct: 122 GVSKRTAPDHPLGVSKRTAPDHPLGVSKRTAPDHTLGVSKRTAPDHPLGLSKRTAPDHPL 181
Query: 481 GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPP 660
G + PDH H R P V + + GL +R P TH RT P
Sbjct: 182 GVSKRTAPDH----PHGVSKRTAPDHPHGVSKHTAPDHTLGLSKRTGPDHTHGVSKRTAP 237
Query: 661 RHP 669
HP
Sbjct: 238 HHP 240
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +1
Query: 466 PLNPKGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRG 645
P + G + PDH + R P L + R+ + GL +R P TH
Sbjct: 273 PDHTLGVSKRTAPDHPLGVSK----RTAPDHTLGLSKRTAPDHTLGLFKRTGPDHTHGVS 328
Query: 646 IRTPPRHPASGLGRSRSXXYLL 711
RT P HP GL + + + L
Sbjct: 329 KRTAPDHPL-GLSKRTAPDHTL 349
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/114 (25%), Positives = 37/114 (32%), Gaps = 3/114 (2%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTP 608
PP N P +P P P P + + P P P P+ PP P
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPP 169
Query: 609 --ATVSPTPY-PSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXXXFPTP 761
A P PY P + P P+ + P PP + P P P P
Sbjct: 170 PNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYP 223
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -3
Query: 733 GXGEXXS*GGMXEIXTGQVQTQDGVGECVS--LVDGYGVGDTVAGVQHDTGG----TTGR 572
G G GG+ + G+V GVG+ + D GVGD G D GG GR
Sbjct: 126 GVGRVSDNGGVGDDANGRVSDDGGVGDDAEGRVSDDGGVGDDGVGRVSDYGGVGDDANGR 185
Query: 571 VQREHGLDGDVHGGRV 524
V + G+ GD GRV
Sbjct: 186 VSDDGGV-GDNAEGRV 200
Score = 31.5 bits (68), Expect = 0.99
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = -3
Query: 709 GGMXEIXTGQVQTQDGVGECVS--LVDGYGVGDTVAGVQHDTGGTTGRVQREHGLDGDVH 536
GG+ + G+V GVG+ + + D GVGD G D GG DG V
Sbjct: 162 GGVGDDGVGRVSDYGGVGDDANGRVSDDGGVGDNAEGRVSDDGGVGDNADGRVSDDGGVG 221
Query: 535 GGRVEC 518
V C
Sbjct: 222 DDDVVC 227
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -3
Query: 709 GGMXEIXTGQVQTQDGVGECVS--LVDGYGVGDTVAGVQHDTGG----TTGRVQREHGLD 548
GG+ + G+V GVG+ + D GVGD G D GG GRV + G+
Sbjct: 50 GGVGDDADGRVSDDGGVGDDADGRVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVG 109
Query: 547 GDVHG 533
D G
Sbjct: 110 DDAIG 114
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 33.1 bits (72), Expect = 0.32
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Frame = +3
Query: 510 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPYPS--TRDTHSPTPSC 671
C+K T PCT PC+ CT+ +P +TP T TPY T T TP
Sbjct: 761 CTKRYT--PCTERYTPCTERYTPCTKRYIPFAKRYTPCTERYTPYTERYTPSTERYTPCT 818
Query: 672 VWTWPVXISXIPPHDXXSP 728
P P ++ +P
Sbjct: 819 ERYTPSTKRYTPCYERYTP 837
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPYPSTRDTHSPTPSCVW 677
PR+ H+T+P T P T+P P T P T P T H+ P +
Sbjct: 36 PRTTKPHTTKPHTTKPHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTIK 95
Query: 678 TWPVXISXIPPH 713
+ PH
Sbjct: 96 LYTTKPKTTKPH 107
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPYPSTRDTHSPTP 665
P + H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 131 PCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPYPSTRDTHSPTP 665
P++ H+ +P T P R T+P P + T PT P T H+ P
Sbjct: 101 PKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKP 156
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPYPSTRDTHSPTP 665
PR+ H+T+P T P T+P P T PT P T H+ P
Sbjct: 121 PRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKP 176
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.1 bits (72), Expect = 0.32
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
P + V P TP + +P P P R P + S+ + PP P+ P +R P
Sbjct: 87 PLVPAGVEAPTPTPMVAQSVAPTPPPPP--RAPETPSQAPSPPP--PPTSPATRAPPPP- 141
Query: 585 PPVSCWTPATVSPTPYPSTRD-THSPTP 665
PP++ PAT P P P T P P
Sbjct: 142 PPIA---PATGGPPPPPPIAPATGGPPP 166
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 32.7 bits (71), Expect = 0.43
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 531 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPYP-STRDTHSPTPS 668
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 32.7 bits (71), Expect = 0.43
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 426 SPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTR-PPCTSPSKPCSRCTRPVVPPVSCW 602
SPP+ P SP+P+ P R + + R +SP KP T+PVVP
Sbjct: 1474 SPPK--PVNRAVDSPKPEVPVSPREFFARQDSAQRIGQSSSPPKPVKPSTKPVVPVKPVK 1531
Query: 603 TPATVSP-TPYPSTR 644
P+ + P P PS++
Sbjct: 1532 PPSPIKPKPPIPSSK 1546
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 32.3 bits (70), Expect = 0.56
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCT-SPSKPCSR---CT 572
P+T + P TP T + +P T +T PP T +P+KP + T
Sbjct: 98 PATTTPTKPTTTTPPATTTPT-KPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPAT 156
Query: 573 RPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 668
P + PAT +PT +T + TP+
Sbjct: 157 TTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 31.9 bits (69), Expect = 0.75
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +3
Query: 468 PQPQGPTERR*PRSCSK---HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPYP 635
P Q P +R P S+ H RPP S P +R T P P + PAT +PT
Sbjct: 7 PSQQIPHHQRPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPT 65
Query: 636 STRDTHSPTPS 668
+T + TP+
Sbjct: 66 NTTPPATTTPT 76
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPC-TSPSKPCSR---CT 572
P+T + P TP T + +P T + +T PP T+P+KP + T
Sbjct: 56 PATTTPTKPTNTTPPATTTPT-KPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPAT 114
Query: 573 RPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 668
P + P T +PT +T + TP+
Sbjct: 115 TTPTKPTTTTPPGTTTPTKPTTTTPPATTTPT 146
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSR---CTRPVVPPVSC 599
P P LL P Q P R + +T P T+P+KP + T P +
Sbjct: 26 PHHQRPPLL----PSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTT 81
Query: 600 WTPATVSPTPYPSTRDTHSPTPS 668
PAT +PT +T + TP+
Sbjct: 82 TPPATTTPTTPTTTTPPATTTPT 104
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKH---STRPPC-TSPSKPCSRCT 572
P+T + P TP G+ P PT P + + +T PP T+P+KP +
Sbjct: 112 PATTTPTKPTTTTPP----GTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTP 167
Query: 573 RPVVPPVSCWT---PATVSPTPYP 635
P T PAT +PT P
Sbjct: 168 PATTTPTKSTTTTPPATTTPTTRP 191
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +3
Query: 411 TMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 590
T + +P TP T P PT P + + T+P T+P + T P
Sbjct: 44 TTTPTTPTTTTPPATTT----PTKPTNTTPPATTTP--TKPTTTTPPATTTPTTPTTTTP 97
Query: 591 VSCWTPATVSPTPYPSTRDTHSPT 662
+ TP + T P+T PT
Sbjct: 98 PATTTPTKPTTTTPPATTTPTKPT 121
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 32.3 bits (70), Expect = 0.56
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Frame = +3
Query: 408 STMSCVSPPRNTPXLL--TEGSPQPQGPTERR*PRSCSK---HSTRPPCTSPSKPCSRCT 572
S S +SP +P + T GSP GPT P + +S P PS P
Sbjct: 370 SDASGMSPGGFSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPA 429
Query: 573 RPVVPPVS-CWTPATVSPTPYPSTRDTHSPT-PSCVWTWPVXISXIPPHDXXSP 728
P P S ++P++ S + Y ++SPT PS T P P + SP
Sbjct: 430 SPSYSPTSPGYSPSSPS-SGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 482
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.56
Identities = 22/95 (23%), Positives = 33/95 (34%)
Frame = +3
Query: 402 IPSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPV 581
+PS M C PP G+ + E + T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDS--KGGAAGAEEKEEGEGGGDTPTTAPTTAATTPTTPTTAPTTPT 143
Query: 582 VPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWP 686
P + TP T + TP +P P+ P
Sbjct: 144 TPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = +3
Query: 465 SPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP----TPY 632
SP+P+ E P S + + P T +P S P +PP P ++ P P
Sbjct: 823 SPEPESAVELSRPDSLTMEA---PTTKTDRPLSPSAPPPLPPRPVGAPPSLPPRPRTRPL 879
Query: 633 PSTRDTHSPTP 665
P DT P P
Sbjct: 880 PPKSDTPPPPP 890
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 31.9 bits (69), Expect = 0.75
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 392 IWHHTFYNELRVAPEEHPXPAH*GLP-STPRANREKMTQIMFETFNTPAMYVAIQAVLSL 568
I H F + L+V P +H +P +T +E++ +I+ F A+Y+ Q++L++
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMT--IPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAM 569
Query: 569 YASGRTTGIV 598
Y+ +GIV
Sbjct: 570 YSYSAVSGIV 579
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 31.9 bits (69), Expect = 0.75
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTP 608
PP + +L+ PQ T+RR S S HST P ++P P T P +
Sbjct: 985 PPASRIPVLSS-KPQASPTTDRRAASSSSNHST-PVNSAPPTPTKNATPSKGTPGQSTSG 1042
Query: 609 ATVSPTPYPSTRDTHSP-TPS 668
V+ TP T +P TPS
Sbjct: 1043 TPVNGTPCKGTPLNSTPGTPS 1063
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 31.5 bits (68), Expect = 0.99
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 501 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTP 665
P S S S P SP P S P P S ++P+ SP+ Y S+ SP P
Sbjct: 4 PDSPSPSSPSPDSPSPDSPSSYSPSPDSP--SSYSPSLDSPSSYSSSSYLPSPDP 56
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 31.5 bits (68), Expect = 0.99
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 405 PSTMSCVSP-PRNTPXLLTEGSPQPQG-PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 578
PS +P P +P ++ SP P P+ P S S+ P S P S T P
Sbjct: 479 PSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNP-SISTSP 537
Query: 579 VVPPVSCWTPATVSPTPYPSTRDTHSPTPS 668
+ P P++ +P+P+PS+ + P+P+
Sbjct: 538 ISNP----HPSS-NPSPHPSSNPSSEPSPN 562
>SB_40706| Best HMM Match : Extensin_2 (HMM E-Value=7.9)
Length = 301
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/102 (23%), Positives = 42/102 (41%)
Frame = +2
Query: 377 DDMEKIWHHTFYNELRVAPEEHPXPAH*GLPSTPRANREKMTQIMFETFNTPAMYVAIQA 556
D +K WH + L H P + G PS P +R +T + + + +Y +
Sbjct: 56 DLRKKRWHCQIFARLSKLRGTHHYPLYQGYPSLPFISRIPITTLYIKDTHHYPLYQGYPS 115
Query: 557 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 682
+ + TT + D +H P+Y+GY I R+ +
Sbjct: 116 LPFISRIPITTLYIKD-----THHYPLYQGYPSVPFISRIPI 152
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 233 GNTARGASSPAKPALHIPEPLSTT 162
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 482 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 598
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/71 (32%), Positives = 27/71 (38%)
Frame = +3
Query: 423 VSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW 602
+ PP NTP LT Q P P S+ S P +P S RP+ PP
Sbjct: 57 LKPPSNTPQQLTTPPHQSNTPRPLTPP---SRQSNNPRPHTPPSCQSNTPRPLTPPPR-- 111
Query: 603 TPATVSPTPYP 635
T P YP
Sbjct: 112 QSNTTQPPAYP 122
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 233 GNTARGASSPAKPALHIPEPLSTT 162
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Frame = +3
Query: 456 TEGSPQPQGPTERR*PRSCSKHSTRPPC--TSPSKPCSRCTRPVVPPV----SCWTPATV 617
TE + + TE P S + + PP T + P ++ T PPV S TP
Sbjct: 789 TEANDRQSQTTEANTPPSQTTEAYTPPAQTTEANTPPAQTTEANTPPVQTTESYNTPTET 848
Query: 618 SPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXP 734
+ PY T T S T + P I P +P P
Sbjct: 849 TALPYQET-STESSTTAQPTQPPTFAPSIAPTQPPTPKP 886
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = -1
Query: 687 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 508
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 507 IWVI 496
+I
Sbjct: 153 YHII 156
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 687 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 550
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 687 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 550
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_32646| Best HMM Match : IQ (HMM E-Value=8.5e-07)
Length = 465
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 603 TPATVSPTPYPSTRDTHSPTPSCVWT 680
TPAT PTPY S SPTP T
Sbjct: 404 TPATQQPTPYES-----SPTPEVAST 424
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 384 WRRFGIIPSTMSCVSPPRNTPXLLTEGSPQPQGPT 488
WR+ + P PP T +T +P Q PT
Sbjct: 377 WRQLQLHPIPTYPAPPPPTTRGEMTTATPATQQPT 411
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 448 LLPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 507
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 508 QRETTPPRPS 517
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 528 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHS 656
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 519 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 629
H+T P P T PS P C + P C+T T+SP P
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKP 701
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Frame = +3
Query: 444 PXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPC----SRCTRPVVPPVS----- 596
P T SP P P+ C T P KPC + T+P P++
Sbjct: 669 PSPATHPSPSQPCPATHLSPKPCFTFVTLSP-----KPCFTFLTLSTKPCFTPLTLSTKL 723
Query: 597 CWTPATVSPTP--YPSTRDTHSPTPSCVW 677
C+TP T+SP P Y ++ + + +W
Sbjct: 724 CFTPLTLSPKPNAYYASFERSCTNKNIIW 752
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 411 TMSCVSPPRNTPXLLTEGSPQPQ-GPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVP 587
T S S P TP T +P P PT +C+ T P +P+ + T
Sbjct: 11 TTSYTSTPSYTPT--TSYTPTPSYTPTTSY---TCTTSYTPTPSYTPTPSYTPTTS--YT 63
Query: 588 PVSCWTPAT-VSPTPYPSTRDTHSPTPS 668
P + +TP T +PTP + +++PTPS
Sbjct: 64 PTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 491 LLPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 550
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 551 QRETTPPRPS 560
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 415 LLPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 474
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 475 QRETTPPRPS 484
>SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 223
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 108 LLPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 167
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 168 QRETTPPRPS 177
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 472 LLPHCFPRPDDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 531
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 532 QRETTPPRPS 541
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 522 STRPPCTSPSKPCSRCTRPVV---PPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVX 692
+T P + + T P+V PP+ TP+ V+ TP T TPS V T P+
Sbjct: 3 TTTPLLVTTTPSLVTTTPPLVTTTPPLVTTTPSLVTTTPLLVTT-----TPSLVTTTPLL 57
Query: 693 ISXIPPHD 716
++ PP D
Sbjct: 58 VTNTPPLD 65
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 233 GNTARGASSPAKPALHIPEPLSTT 162
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 30.3 bits (65), Expect = 2.3
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +3
Query: 444 PXLLTEGSP-QPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATV 617
P +LTE + QP P P T PP PS T+ P PPV P TV
Sbjct: 21 PPVLTEAATTQPPAPPPE--PTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV 78
Query: 618 SPTPYPSTRDTHSPTP 665
P P + T P P
Sbjct: 79 -PPPVVTDAPTTVPPP 93
>SB_12656| Best HMM Match : CS (HMM E-Value=0.0018)
Length = 277
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = +3
Query: 534 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPH 713
P + S P SR P P P+ + T P +R H P P + P+ + IPP
Sbjct: 161 PLPATSIPPSRYIHPPFP----LHPSPLPATSIPPSRYIHPPFP--LHPSPLPATSIPPS 214
Query: 714 DXXSPXPXRXXXFPTPR 764
P P R PR
Sbjct: 215 RYIHPPPFRYIQVDEPR 231
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 30.3 bits (65), Expect = 2.3
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Frame = +3
Query: 396 GIIPSTMSCVSPPRNTPXLLT---EGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSR 566
G +P + V+PP + T S P+ T S + S P TSP P +
Sbjct: 864 GPVPPQPTTVAPPMTSGPTTTTPISTSAAPEITTANPGSPSTTTKSVTTPQTSPKTPQTP 923
Query: 567 CTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCV 674
T P T T+ T P T +P + V
Sbjct: 924 ATLPTTQTPEPGTEKTMPTTATPGTGQPTTPLTTSV 959
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 546 PSKPCSRCTRPVVPP 590
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 465 SPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA-TVSPTPYPST 641
+P PT+ P + + PP S P + P P + P+ +P+ YP T
Sbjct: 189 TPSSYPPTQPSYPPTAPSY---PPTPSSYPPIAASYPPTAPSYNPTAPSYPPTPSSYPPT 245
Query: 642 RDTHSPT 662
+ +H PT
Sbjct: 246 QPSHPPT 252
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 516 KHSTRPPCTSPSKPCSRC----TRPVVPPVSCWTPATVS--PTP--YPSTRDTHSPT 662
+H + PP T PS P + T+P PP + P S PTP YP T+ ++ PT
Sbjct: 505 QHPSYPP-TQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYPPTPSSYPPTQPSYPPT 560
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 546 PSKPCSRCTRPVVPPVSCWT-PATVSPTPYPSTRDTHSPTPS 668
PS P ++ + P P T P P PYP T+ ++ PTPS
Sbjct: 507 PSYPPTQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYPPTPS 548
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 483 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPT 662
PT+ P + S + P P+ P T PP++ P T +P+ Y T ++ PT
Sbjct: 181 PTQPFYPPTPSSYPPTQPSYPPTAPSYPPTPSSYPPIAASYPPT-APS-YNPTAPSYPPT 238
Query: 663 PS 668
PS
Sbjct: 239 PS 240
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 414 MSCVSPPRNTPXLLTEGSPQ-PQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 590
++ V P + LLT+ +P P R P CS ST PP PS S P++ P
Sbjct: 287 LALVLPTMHLQLLLTKPTPATPPSRAPTRSPSGCSSDSTNPP---PSPRVSGAVPPLMLP 343
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/65 (29%), Positives = 24/65 (36%)
Frame = +3
Query: 567 CTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIPPHDXXSPXPXRXX 746
CT P ++ P T + T P T+ P PS + T P PP P P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPPT-----PPAPPSPPIPTAPP 204
Query: 747 XFPTP 761
P P
Sbjct: 205 TPPMP 209
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/114 (21%), Positives = 36/114 (31%), Gaps = 2/114 (1%)
Frame = +3
Query: 426 SPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWT 605
+PP + + T P P+ P P ++ P P+ P P P +
Sbjct: 232 APPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAP 291
Query: 606 PATVSPTPYPSTRDTHSPTPSCVWTWP--VXISXIPPHDXXSPXPXRXXXFPTP 761
P P P+ +P + P I PP+ P P P P
Sbjct: 292 PNPYIPPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAP 345
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = +3
Query: 429 PPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTP 608
PPR TP TE S PT R+ + +T PP T+ S+P + R P + P
Sbjct: 1104 PPRTTPEPTTEPSRTKPEPTTEP-SRTKPEPTTEPPRTT-SEPTTEPLRTTPEPTT--EP 1159
Query: 609 ATVSPTPYPSTR 644
T T P R
Sbjct: 1160 TTEHVTTVPRRR 1171
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 450 LLTEGSPQPQGPTERR*PRS-CSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTP 608
LL P+P TE R S++ TRP TSP+ +R CT+P V+C P
Sbjct: 549 LLPHCFPRPGDVTEASNERRPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCP 608
Query: 609 ATVSPTPYPS 638
+ P PS
Sbjct: 609 QRETTPPRPS 618
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 567 CTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 668
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 570 TRPVVPPVSCWTPATVSPTPYPSTRDTH---SPTPSCVWTWPVXISXIPPHDXXSPXP 734
T P PV+ SPTP P T + SPTP+ V T V + PP + P
Sbjct: 160 TSPTPTPVTAKVNVDASPTPTPVTAKVNADTSPTPTPV-TAKVCVETAPPQVCVATFP 216
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 420 CVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSR-----CTRPVV 584
C S R+T + G ERR P H TRP TSP+ +R CT+P
Sbjct: 41 CHSRHRSTIRPMVPGGLLSMWLLERRAPT----HKTRPNYTSPTTNAARIVNEGCTKPAS 96
Query: 585 P-PVSCWTPATVSPTPYPS 638
V+C P + P PS
Sbjct: 97 EHDVTCSCPQRETTPPRPS 115
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 54 LLRCARTVRIRIYVPTCHLFNNTIL 128
L RC +RIR+++PTC + T+L
Sbjct: 1472 LRRCRYLLRIRVHLPTCSHLSRTLL 1496
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.1 bits (62), Expect = 5.3
Identities = 31/126 (24%), Positives = 39/126 (30%), Gaps = 7/126 (5%)
Frame = +3
Query: 528 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWT---WPVXIS 698
+P +PS + PP S P PTP + +P PS + P +
Sbjct: 320 QPQMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTPVK 379
Query: 699 XIPPHDXXS----PXPXRXXXFPTPRXXXENXSXISRKNLXXXXPSNFXPGKWAPXXFHH 866
PP S P P P P S + PS F P P
Sbjct: 380 APPPSVFASSSGVPTPVAAPP-PAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAA 438
Query: 867 PPPKXF 884
PPP F
Sbjct: 439 PPPSVF 444
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 516 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSC 671
KH T PP S + P P+S TP+ SP + S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 29.1 bits (62), Expect = 5.3
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 598 HDTGGTTGRVQREHGLDGDVH--GGRVECFEHDLGHLLSVGPWG*GEPSVSRXGVFLGGD 425
H TGG R+ G D +H GG V G + G G+ S R V GGD
Sbjct: 68 HVTGGDDSRIHVTGGDDSHIHVTGGDVSRIHVTGGDDSRIHVTGGGDDS--RIHVTEGGD 125
Query: 424 TQLIVEGMMPNLLHVIPVSDDS 359
+++ V G + +HV DDS
Sbjct: 126 SRIHVTGGDDSRIHVTG-GDDS 146
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = +3
Query: 531 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPYPSTRDTHSPTPSCVWTWPVXISXIP 707
PP T+P P P + T AT PT P+T T PT + P +
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPTTAPTTPEPTTLEPTD 60
Query: 708 PHDXXSP 728
P P
Sbjct: 61 PPTTERP 67
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
P S +P P + S P T P + H+T +P P S
Sbjct: 33 PLNTSLTAPVVPLPTPVAPPSTVPYTATPA--PAQQAPHTTAASQPAPYTPASGQPASYT 90
Query: 585 PPVSCWTPA-TVSPTPYPSTRDTHSPTP 665
P + +TPA TV P +++ T SP P
Sbjct: 91 PAYTPYTPASTVGRMPPTTSQSTPSPAP 118
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +3
Query: 465 SPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTR 644
SP P P+ P + + + PP +P+ P P PP PA P P+ +
Sbjct: 49 SPPPPPPS----PPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQ 104
Query: 645 DTHSP 659
+P
Sbjct: 105 PPPAP 109
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 28.7 bits (61), Expect = 7.0
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 414 MSCVSPPRNTPXL-LTEGSPQPQGPTERR*PRSCSKH--STRPPCTSPSKPCSRCTRPVV 584
+S PP TP + G P P PRS ++ S PP SP++ +RP V
Sbjct: 133 VSHAGPPGLTPVCSVVNGIPSPI-------PRSVNQAFGSRVPPLKSPTERGPVYSRPEV 185
Query: 585 PPVSCWTPATVSPTPYPSTRDTHSPTP 665
P P+ SP PY T P+P
Sbjct: 186 PQQR--GPSMASPHPYTLPFVTSQPSP 210
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 540 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPYPSTRDTHSPTPSC-VWT 680
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 473 TPRANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 598
TP+ ++ ++F F P M +A++ + A+G TGI+
Sbjct: 175 TPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Frame = +3
Query: 510 CSKHSTRPPCTSPSKPCSRCTR-PVVP-PVSCWTPATVSPTP--YPSTRDTHSPTPSCVW 677
C + P K C C + P P P P TV P P P +T P P
Sbjct: 120 CERWKDDPAVRKCRKTCGLCNKIPSPPNPTEAPEPETVPPQPETVPPQPETVPPQPGSEE 179
Query: 678 TWPVXISXIPPHDXXS-PXPXR 740
PV + PP S P P +
Sbjct: 180 PEPVSQAPEPPKPKTSAPEPPK 201
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 570 TRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCVWTWP 686
T VVPP+ P V P+P + SPTPSC+ P
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQP 240
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 534 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPS 638
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 465 SPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 590
S P T RR P S K + P TSP+K ++ T P PP
Sbjct: 452 SKVPSKDTRRR-PTSSGKIAPPPRQTSPTKQATKKTTPSRPP 492
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 520 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTP 657
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.7 bits (61), Expect = 7.0
Identities = 34/123 (27%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Frame = +3
Query: 501 PRSCSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPSCV 674
P S+ + PP + +P P SR + P PP T P P PS P PS
Sbjct: 288 PPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARM---GTAPPPPPPSRSSQRPPPPSRG 344
Query: 675 WTWPVXISXIPPHDXXS----PXPXRXXXFPTPRXXXENXSXISRKNLXXXXPSNFXPGK 842
P + PP + P P P P E S N P PG+
Sbjct: 345 APPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPP----PGR 400
Query: 843 WAP 851
AP
Sbjct: 401 GAP 403
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 546 PSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTH--SPTPSCVWTWPVXISXIPPHDX 719
P KP S T P+ P +P+T S TP + T+ P+PS T P+ S P
Sbjct: 1254 PIKP-SPSTTPIKP-----SPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPS--PSTTP 1305
Query: 720 XSPXPXRXXXFPTP 761
P P P+P
Sbjct: 1306 IKPSPSTTPIKPSP 1319
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 480 GPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSP 659
G T RR P T P P T P P S +PA S T P D
Sbjct: 683 GTTLRRNPADIRMQQT--PSPEDQSPVPAATVPGPDPSSVSSPAATSATEKPPPSDKRPE 740
Query: 660 TPS 668
TP+
Sbjct: 741 TPA 743
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 525 TRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPYPSTRDTHSPTPSCVWTWPVXISX 701
T PP T+P P P + T T PT P+T T PT + P +
Sbjct: 153 TEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTAPTTPEPTTLEP 212
Query: 702 IPP 710
P
Sbjct: 213 TDP 215
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 543 SPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTP 665
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 499 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRTHLRGIRTPPRH 666
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 513 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPST 641
S+ ST+ P T KP + RP+ P + P + P P T
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRT 294
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 504 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPYPS 638
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 64 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 114
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 233 GNTARGASSPAKPALHIPEPLSTT 162
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = +3
Query: 522 STRPPCTSPSKPCSRCTRP----VVPPVSCWTPA--TVSPTPYPSTRDTHSPTPSCVWTW 683
+T P T+ + P + T P P + TP T +PT +T +T + TP+ T
Sbjct: 142 TTTTPNTTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTPTATTTTPNTTTNTPNATTTT 201
Query: 684 PVXISXIPPHDXXSP 728
P + P +P
Sbjct: 202 PTATTTTPNATTTTP 216
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 233 GNTARGASSPAKPALHIPEPLSTT 162
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +3
Query: 453 LTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPY 632
LT+ +P+ T +R P+ K+ P T P S + PP S TP++ + P
Sbjct: 896 LTKNAPKSVQTTSKR-PQDNLKNFPSPRKTRT--PSSHQSPQSAPPSSPCTPSSSTAPPL 952
Query: 633 PSTRDTHSPTPS 668
P+ + S PS
Sbjct: 953 PTNPKSPSEAPS 964
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 28.3 bits (60), Expect = 9.2
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Frame = +3
Query: 441 TPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC--WTPAT 614
T LL E P+ + ER PR T +P + T+P++P V AT
Sbjct: 187 TKPLLPEVEPEEE---ERATPRPTKAKPTTMKRRPTERPTKKPTKPLLPEVEPEEEEKAT 243
Query: 615 VSPTPYPSTRDTHSPT--PSCVWTWPVXISXIPPHDXXSPXPXRXXXFPTPR 764
PT T PT P+ T P+ P + +P P + PT R
Sbjct: 244 PRPTKAKPTTIKRRPTERPTKKPTKPLLPEVEPEEERATPRPTKAK--PTTR 293
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +3
Query: 459 EGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPS 638
+ +P+P PT + P + + P SP+ P PV P P T P P
Sbjct: 17 QATPKPPQPTPPK-PDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQPPVTQPP 75
Query: 639 TRDTHSP 659
T SP
Sbjct: 76 PPVTQSP 82
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 405 PSTMSCVSPPRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVV 584
P+T + +PP ++ Q Q + + P S + T+PP P++ S T P
Sbjct: 99 PATTTVPAPPPSSTTAPVNAPAQQQPLLQPQRPTPPSSYPTQPPSRHPTQTQSAITGPSH 158
Query: 585 P 587
P
Sbjct: 159 P 159
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 516 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 668
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 552 KPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTP 665
+PC T P PP + W+P + P P D PTP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 268
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 552 KPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTP 665
+PC T P PP + W+P + P P D PTP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQP---DQEQPTP 202
>SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14)
Length = 579
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 405 PSTMSCVSP-PRNTPXLLTEGSPQPQGPTERR*PRSCSKHSTRPPCTSPSKP 557
P T + SP P P L +G+P PQ T P+ ++ RP S P
Sbjct: 449 PGTFAMYSPIPAVLPGLSPDGAPHPQHRTPGFRPKYNQRYRQRPKNNQLSAP 500
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,589,388
Number of Sequences: 59808
Number of extensions: 763443
Number of successful extensions: 3001
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2848
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -