Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I08
(978 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.015
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.020
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.061
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.081
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.25
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 28 2.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 700 PXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
P P P PPP P P PPPPP + PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 661 PPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPP 807
PPP P P P PPP P PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
P P P P PP P PPPP P P PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP---------PPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.00
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 660 PTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806
P PP PP P PP PP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
Frame = +1
Query: 757 PPPXPX------PXXXPXPPPPPXLXLXXPPPXXXXP 849
PPP P P P P PPP + PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 795 PPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
PPPP P P P P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 3/50 (6%)
Frame = +3
Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXP---XXXXXPXPXPPP 902
P P P P P P PP P P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = +1
Query: 574 PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753
P P PP G PP P PP P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPV---PAPSS 1176
Query: 754 XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
PP P P P PPP P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Score = 31.1 bits (67), Expect = 0.25
Identities = 26/115 (22%), Positives = 26/115 (22%), Gaps = 1/115 (0%)
Frame = +3
Query: 573 PXXXXRGXXPPSXXXXWXPPXXKXXXRXGPTP-PXXXXXXXGXXXAXXXPPXXXXXXPXX 749
P G P PP K P P P A P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 750 XXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
P P PP P PP P P P PPP P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
PP P P P P P P PPP P P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP--STAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 29.9 bits (64), Expect = 0.57
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +3
Query: 741 PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP-PXXXXXXXXXPXXXXXPXPXPPPXRXP 914
P PP P P P P P PPP P P P P P P P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSGIP 1092
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/92 (23%), Positives = 22/92 (23%)
Frame = +1
Query: 574 PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753
P P PP PP P S PP P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTST--PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 754 XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
PP P P P P P P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/79 (24%), Positives = 19/79 (24%)
Frame = +3
Query: 600 PPSXXXXWXPPXXKXXXRXGPTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPX 779
PP PP K P P A PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 780 XPPXXPPPPXXXPXXPPPP 836
PP PP P PP
Sbjct: 1210 VPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 741 PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP 833
P PP P P P P P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.020
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = -2
Query: 833 GGGXXRXXXGGGG---GXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663
GGG G GG G G G G GG G G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 662 GPXSLXGFXXGGGPXXXXXGGXXXPG 585
L GF G G GG PG
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.061
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%)
Frame = +3
Query: 630 PXXKXXXRXGPT-PPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806
P R P PP P P P P P PP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 807 XXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
P PP P P P P P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 33.1 bits (72), Expect = 0.061
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +3
Query: 741 PXXXXXPPXPXPXXPPXXPPP-PXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
P PP P PP PP P P PP P P P PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 3/70 (4%)
Frame = +1
Query: 601 PPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXX---PXXXXXPXXXXXPPPXP 771
PP PP P PP P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 772 XPXXXPXPPP 801
P P P P
Sbjct: 475 APPPAPAPAP 484
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
PP P P P P P P PP P P P P P
Sbjct: 415 PPVPTP--PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.081
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
P P P PP P PPPP P P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPP 836
PP P PP PP P P PPPP
Sbjct: 1710 PPMSVPP-PPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 663 TPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPP 836
TPP + PP P P P P PP PPPP P P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.25
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 774 PXXPPXXPPPPXXXPXXPPPP 836
P PP PPPP P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 768 PXPXXPPXXPPPPXXXPXXPPPP 836
P PP PPP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 757 PPPXPXPXXXPXPPPPP 807
PPP P P PPPPP
Sbjct: 14 PPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPP 833
P P P PP PP P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 741 PXXXXXPPXPXPXXPPXXPPPP 806
P PP P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 775 PXXXPXPPPPPXLXLXXPPPXXXXP 849
P P PPPPP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 1/70 (1%)
Frame = +3
Query: 693 GXXXAXXXPPXXXXXX-PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPX 869
G A PP P PP P P PP P P P P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 870 XXXXPXPXPP 899
P PP
Sbjct: 176 QPAAPVKSPP 185
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%)
Frame = +1
Query: 643 PXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXX-PPPXPXPXXXPXPPPPPXLXL 819
P S PP P P P P PPP PP P L
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192
Query: 820 XXPPPXXXXPXXXXSXXXXXXXXXXXXXXAPP 915
PP P S APP
Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/66 (24%), Positives = 16/66 (24%)
Frame = +3
Query: 717 PPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXP 896
PP P P P P PP P P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 897 PPXRXP 914
P P
Sbjct: 199 PKVPPP 204
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 87 PLVSQRPPLNLHKLTMNFAKILSFVFALVLALRMTSAAPEPRWKIFKKIEKMGRNIRDGI 266
PL+ PP N+ + + + FAL + R+ ++ P+P+ ++ R I D +
Sbjct: 146 PLLLSNPPRNMIGQSQSGTGKTA-AFALTMLSRVDASVPKPQAICLAPSRELARQIMDVV 204
Query: 267 VKAGPAIEV 293
+ G EV
Sbjct: 205 TEMGKYTEV 213
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 806 GGGGGXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663
GG GG G G GGG G G G G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +3
Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPP 899
P P P PP P P PP P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 757 PPPXPXPXXXPXPPPPP 807
P P P P PPPPP
Sbjct: 732 PTPAPTPAVKHHPPPPP 748
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,527,472
Number of Sequences: 5004
Number of extensions: 45501
Number of successful extensions: 440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 503290872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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