BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP01_F_I08 (978 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.015 SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.020 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.061 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.081 SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.25 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7 SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 28 2.3 SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.0 SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.3 SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.3 >SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||Manual Length = 1461 Score = 37.1 bits (82), Expect = 0.004 Identities = 17/50 (34%), Positives = 18/50 (36%) Frame = +1 Query: 700 PXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849 P P P PPP P P PPPPP + PPP P Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782 Score = 31.9 bits (69), Expect = 0.14 Identities = 15/49 (30%), Positives = 15/49 (30%) Frame = +1 Query: 661 PPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPP 807 PPP P P P PPP P PPPPP Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781 Score = 29.5 bits (63), Expect = 0.75 Identities = 17/51 (33%), Positives = 17/51 (33%) Frame = +3 Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914 P P P P PP P PPPP P P PPP P Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP---------PPGVAGAGPPPPPPPPP 783 Score = 29.1 bits (62), Expect = 1.00 Identities = 14/49 (28%), Positives = 14/49 (28%) Frame = +3 Query: 660 PTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806 P PP PP P PP PP PPPP Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782 Score = 28.3 bits (60), Expect = 1.7 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 6/37 (16%) Frame = +1 Query: 757 PPPXPX------PXXXPXPPPPPXLXLXXPPPXXXXP 849 PPP P P P P PPP + PPP P Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768 Score = 27.5 bits (58), Expect = 3.0 Identities = 12/36 (33%), Positives = 12/36 (33%) Frame = +3 Query: 795 PPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902 PPPP P P P P P PPP Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768 Score = 26.2 bits (55), Expect = 7.0 Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 3/50 (6%) Frame = +3 Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXP---XXXXXPXPXPPP 902 P P P P P P PP P P P P PPP Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 35.1 bits (77), Expect = 0.015 Identities = 25/92 (27%), Positives = 25/92 (27%) Frame = +1 Query: 574 PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753 P P PP G PP P PP P P P P Sbjct: 1122 PVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPV---PAPSS 1176 Query: 754 XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849 PP P P P PPP P P P Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208 Score = 31.1 bits (67), Expect = 0.25 Identities = 26/115 (22%), Positives = 26/115 (22%), Gaps = 1/115 (0%) Frame = +3 Query: 573 PXXXXRGXXPPSXXXXWXPPXXKXXXRXGPTP-PXXXXXXXGXXXAXXXPPXXXXXXPXX 749 P G P PP K P P P A P P Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143 Query: 750 XXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914 P P PP P PP P P P PPP P Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198 Score = 30.3 bits (65), Expect = 0.43 Identities = 16/52 (30%), Positives = 16/52 (30%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914 PP P P P P P P PPP P P P P P Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP--STAPPVPTPSAGLPPVPVPTAKAPP 1238 Score = 29.9 bits (64), Expect = 0.57 Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%) Frame = +3 Query: 741 PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP-PXXXXXXXXXPXXXXXPXPXPPPXRXP 914 P PP P P P P P PPP P P P P P P P Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSGIP 1092 Score = 28.3 bits (60), Expect = 1.7 Identities = 22/92 (23%), Positives = 22/92 (23%) Frame = +1 Query: 574 PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753 P P PP PP P S PP P P Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTST--PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080 Query: 754 XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849 PP P P P P P P P P Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112 Score = 28.3 bits (60), Expect = 1.7 Identities = 19/79 (24%), Positives = 19/79 (24%) Frame = +3 Query: 600 PPSXXXXWXPPXXKXXXRXGPTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPX 779 PP PP K P P A PP P P Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209 Query: 780 XPPXXPPPPXXXPXXPPPP 836 PP PP P PP Sbjct: 1210 VPPPSTAPPVPTPSAGLPP 1228 Score = 26.2 bits (55), Expect = 7.0 Identities = 11/31 (35%), Positives = 11/31 (35%) Frame = +3 Query: 741 PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP 833 P PP P P P P P P P P Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107 >SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 273 Score = 34.7 bits (76), Expect = 0.020 Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%) Frame = -2 Query: 833 GGGXXRXXXGGGG---GXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663 GGG G GG G G G G GG G G G GG Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246 Query: 662 GPXSLXGFXXGGGPXXXXXGGXXXPG 585 L GF G G GG PG Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 33.1 bits (72), Expect = 0.061 Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Frame = +3 Query: 630 PXXKXXXRXGPT-PPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806 P R P PP P P P P P PP P Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450 Query: 807 XXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902 P PP P P P P P P Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482 Score = 33.1 bits (72), Expect = 0.061 Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%) Frame = +3 Query: 741 PXXXXXPPXPXPXXPPXXPPP-PXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914 P PP P PP PP P P PP P P P PP P Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476 Score = 26.6 bits (56), Expect = 5.3 Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 3/70 (4%) Frame = +1 Query: 601 PPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXX---PXXXXXPXXXXXPPPXP 771 PP PP P PP P P P P PP P Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474 Query: 772 XPXXXPXPPP 801 P P P P Sbjct: 475 APPPAPAPAP 484 Score = 25.8 bits (54), Expect = 9.3 Identities = 15/52 (28%), Positives = 15/52 (28%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914 PP P P P P P P PP P P P P P Sbjct: 415 PPVPTP--PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 32.7 bits (71), Expect = 0.081 Identities = 15/48 (31%), Positives = 15/48 (31%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902 P P P PP P PPPP P P PPP Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733 Score = 31.1 bits (67), Expect = 0.25 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPP 836 PP P PP PP P P PPPP Sbjct: 1710 PPMSVPP-PPSAPPMPAGPPSAPPPP 1734 Score = 30.3 bits (65), Expect = 0.43 Identities = 17/58 (29%), Positives = 18/58 (31%) Frame = +3 Query: 663 TPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPP 836 TPP + PP P P P P PP PPPP P P Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLPASSAPSVP 1744 >SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 2363 Score = 31.1 bits (67), Expect = 0.25 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 774 PXXPPXXPPPPXXXPXXPPPP 836 P PP PPPP P PPP Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26 Score = 29.5 bits (63), Expect = 0.75 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = +3 Query: 768 PXPXXPPXXPPPPXXXPXXPPPP 836 P PP PPP P PPPP Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27 Score = 28.3 bits (60), Expect = 1.7 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +1 Query: 757 PPPXPXPXXXPXPPPPP 807 PPP P P PPPPP Sbjct: 14 PPPGFEPPSQPPPPPPP 30 Score = 27.9 bits (59), Expect = 2.3 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPP 833 P P P PP PP P PPP Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30 Score = 27.1 bits (57), Expect = 4.0 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = +3 Query: 741 PXXXXXPPXPXPXXPPXXPPPP 806 P PP P PP PPPP Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27 Score = 25.8 bits (54), Expect = 9.3 Identities = 10/25 (40%), Positives = 10/25 (40%) Frame = +1 Query: 775 PXXXPXPPPPPXLXLXXPPPXXXXP 849 P P PPPPP PP P Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 28.3 bits (60), Expect = 1.7 Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Frame = +3 Query: 693 GXXXAXXXPPXXXXXX-PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPX 869 G A PP P PP P P PP P P P P Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175 Query: 870 XXXXPXPXPP 899 P PP Sbjct: 176 QPAAPVKSPP 185 Score = 28.3 bits (60), Expect = 1.7 Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%) Frame = +1 Query: 643 PXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXX-PPPXPXPXXXPXPPPPPXLXL 819 P S PP P P P P PPP PP P L Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192 Query: 820 XXPPPXXXXPXXXXSXXXXXXXXXXXXXXAPP 915 PP P S APP Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224 Score = 27.5 bits (58), Expect = 3.0 Identities = 16/66 (24%), Positives = 16/66 (24%) Frame = +3 Query: 717 PPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXP 896 PP P P P P PP P P P P P P Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198 Query: 897 PPXRXP 914 P P Sbjct: 199 PKVPPP 204 >SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces pombe|chr 2|||Manual Length = 503 Score = 27.9 bits (59), Expect = 2.3 Identities = 17/69 (24%), Positives = 32/69 (46%) Frame = +3 Query: 87 PLVSQRPPLNLHKLTMNFAKILSFVFALVLALRMTSAAPEPRWKIFKKIEKMGRNIRDGI 266 PL+ PP N+ + + + FAL + R+ ++ P+P+ ++ R I D + Sbjct: 146 PLLLSNPPRNMIGQSQSGTGKTA-AFALTMLSRVDASVPKPQAICLAPSRELARQIMDVV 204 Query: 267 VKAGPAIEV 293 + G EV Sbjct: 205 TEMGKYTEV 213 >SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr 2|||Manual Length = 305 Score = 27.1 bits (57), Expect = 4.0 Identities = 15/48 (31%), Positives = 15/48 (31%) Frame = -2 Query: 806 GGGGGXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663 GG GG G G GGG G G G G GG Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70 >SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 331 Score = 25.8 bits (54), Expect = 9.3 Identities = 13/47 (27%), Positives = 13/47 (27%) Frame = +3 Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPP 899 P P P PP P P PP P P P P Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145 >SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccharomyces pombe|chr 2|||Manual Length = 884 Score = 25.8 bits (54), Expect = 9.3 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +1 Query: 757 PPPXPXPXXXPXPPPPP 807 P P P P PPPPP Sbjct: 732 PTPAPTPAVKHHPPPPP 748 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,527,472 Number of Sequences: 5004 Number of extensions: 45501 Number of successful extensions: 440 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 238 length of database: 2,362,478 effective HSP length: 73 effective length of database: 1,997,186 effective search space used: 503290872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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