SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I08
         (978 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    37   0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    35   0.015
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    35   0.020
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    33   0.061
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    33   0.081
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    31   0.25 
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    28   1.7  
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc...    28   2.3  
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr...    27   4.0  
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb...    26   9.3  
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    26   9.3  

>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 37.1 bits (82), Expect = 0.004
 Identities = 17/50 (34%), Positives = 18/50 (36%)
 Frame = +1

Query: 700 PXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
           P P          P     PPP P     P PPPPP +    PPP    P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782



 Score = 31.9 bits (69), Expect = 0.14
 Identities = 15/49 (30%), Positives = 15/49 (30%)
 Frame = +1

Query: 661 PPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXXPPPXPXPXXXPXPPPPP 807
           PPP          P P    P           PPP       P PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781



 Score = 29.5 bits (63), Expect = 0.75
 Identities = 17/51 (33%), Positives = 17/51 (33%)
 Frame = +3

Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
           P P P   P  PP P      PPPP         P       P PPP   P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP---------PPGVAGAGPPPPPPPPP 783



 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/49 (28%), Positives = 14/49 (28%)
 Frame = +3

Query: 660 PTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806
           P PP               PP      P     PP      PP  PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
 Frame = +1

Query: 757 PPPXPX------PXXXPXPPPPPXLXLXXPPPXXXXP 849
           PPP P       P   P P PPP   +  PPP    P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +3

Query: 795 PPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
           PPPP       P P         P     P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 3/50 (6%)
 Frame = +3

Query: 762 PXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXP---XXXXXPXPXPPP 902
           P P P       P P   P  PP P         P        P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 35.1 bits (77), Expect = 0.015
 Identities = 25/92 (27%), Positives = 25/92 (27%)
 Frame = +1

Query: 574  PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753
            P   P    PP     G PP   P      PP          P P    P     P    
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPV---PAPSS 1176

Query: 754  XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
              PP P P     P PPP      P P    P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208



 Score = 31.1 bits (67), Expect = 0.25
 Identities = 26/115 (22%), Positives = 26/115 (22%), Gaps = 1/115 (0%)
 Frame = +3

Query: 573  PXXXXRGXXPPSXXXXWXPPXXKXXXRXGPTP-PXXXXXXXGXXXAXXXPPXXXXXXPXX 749
            P     G  P        PP  K      P P P           A    P      P  
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143

Query: 750  XXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
                  P    P   PP P      PP P         P       P PPP   P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198



 Score = 30.3 bits (65), Expect = 0.43
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +3

Query: 759  PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
            PP P P   P  P P    P  PPP          P     P P P     P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP--STAPPVPTPSAGLPPVPVPTAKAPP 1238



 Score = 29.9 bits (64), Expect = 0.57
 Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
 Frame = +3

Query: 741  PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP-PXXXXXXXXXPXXXXXPXPXPPPXRXP 914
            P     PP P P   P  P      P  PPP P         P     P P P P   P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSGIP 1092



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 22/92 (23%), Positives = 22/92 (23%)
 Frame = +1

Query: 574  PXXXPGXXXPPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXX 753
            P   P    PP       PP   P S   PP           P P               
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTST--PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080

Query: 754  XPPPXPXPXXXPXPPPPPXLXLXXPPPXXXXP 849
              PP P P   P  P P       P P    P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 19/79 (24%), Positives = 19/79 (24%)
 Frame = +3

Query: 600  PPSXXXXWXPPXXKXXXRXGPTPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPX 779
            PP       PP  K      P P            A   PP            P    P 
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209

Query: 780  XPPXXPPPPXXXPXXPPPP 836
             PP    PP   P    PP
Sbjct: 1210 VPPPSTAPPVPTPSAGLPP 1228



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = +3

Query: 741  PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPP 833
            P     PP P P   P  P P    P  P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 34.7 bits (76), Expect = 0.020
 Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
 Frame = -2

Query: 833 GGGXXRXXXGGGG---GXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663
           GGG      G GG   G G   G G  GG     G     G    G            GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246

Query: 662 GPXSLXGFXXGGGPXXXXXGGXXXPG 585
               L GF  G G      GG   PG
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPG 272


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 33.1 bits (72), Expect = 0.061
 Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%)
 Frame = +3

Query: 630 PXXKXXXRXGPT-PPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPP 806
           P      R  P  PP               P       P      P   P   P  PP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450

Query: 807 XXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
              P  PP P         P     P P P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482



 Score = 33.1 bits (72), Expect = 0.061
 Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
 Frame = +3

Query: 741 PXXXXXPPXPXPXXPPXXPPP-PXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
           P     PP   P  PP  PP  P   P  PP P         P       P PP    P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 3/70 (4%)
 Frame = +1

Query: 601 PPXXXXIGPPP*XXPXSXXGPPPXXXXXXKXXXPXPXXXX---PXXXXXPXXXXXPPPXP 771
           PP       PP   P      PP          P P       P     P     PP  P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474

Query: 772 XPXXXPXPPP 801
            P   P P P
Sbjct: 475 APPPAPAPAP 484



 Score = 25.8 bits (54), Expect = 9.3
 Identities = 15/52 (28%), Positives = 15/52 (28%)
 Frame = +3

Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPPXRXP 914
           PP P P  P   P  P   P   PP          P     P   P P   P
Sbjct: 415 PPVPTP--PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 32.7 bits (71), Expect = 0.081
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = +3

Query: 759  PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPPP 902
            P    P  P    PP    P  PPPP         P     P   PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733



 Score = 31.1 bits (67), Expect = 0.25
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +3

Query: 759  PPXPXPXXPPXXPPPPXXXPXXPPPP 836
            PP   P  PP  PP P   P  PPPP
Sbjct: 1710 PPMSVPP-PPSAPPMPAGPPSAPPPP 1734



 Score = 30.3 bits (65), Expect = 0.43
 Identities = 17/58 (29%), Positives = 18/58 (31%)
 Frame = +3

Query: 663  TPPXXXXXXXGXXXAXXXPPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPP 836
            TPP           +   PP      P     P  P P  PP  PPPP      P  P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLPASSAPSVP 1744


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 774 PXXPPXXPPPPXXXPXXPPPP 836
           P  PP  PPPP   P   PPP
Sbjct: 6   PGNPPPPPPPPGFEPPSQPPP 26



 Score = 29.5 bits (63), Expect = 0.75
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 768 PXPXXPPXXPPPPXXXPXXPPPP 836
           P    PP  PPP    P  PPPP
Sbjct: 5   PPGNPPPPPPPPGFEPPSQPPPP 27



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 757 PPPXPXPXXXPXPPPPP 807
           PPP   P   P PPPPP
Sbjct: 14  PPPGFEPPSQPPPPPPP 30



 Score = 27.9 bits (59), Expect = 2.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPP 833
           P  P P  PP    PP   P  PPP
Sbjct: 6   PGNPPPPPPPPGFEPPSQPPPPPPP 30



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 741 PXXXXXPPXPXPXXPPXXPPPP 806
           P     PP P    PP  PPPP
Sbjct: 6   PGNPPPPPPPPGFEPPSQPPPP 27



 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +1

Query: 775 PXXXPXPPPPPXLXLXXPPPXXXXP 849
           P   P PPPPP       PP    P
Sbjct: 6   PGNPPPPPPPPGFEPPSQPPPPPPP 30


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 1/70 (1%)
 Frame = +3

Query: 693 GXXXAXXXPPXXXXXX-PXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPX 869
           G   A   PP       P     PP   P  P   PP P   P  P            P 
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175

Query: 870 XXXXPXPXPP 899
               P   PP
Sbjct: 176 QPAAPVKSPP 185



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 1/92 (1%)
 Frame = +1

Query: 643 PXSXXGPPPXXXXXXKXXXPXPXXXXPXXXXXPXXXXX-PPPXPXPXXXPXPPPPPXLXL 819
           P S   PP           P P    P     P      PPP         PP  P L  
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192

Query: 820 XXPPPXXXXPXXXXSXXXXXXXXXXXXXXAPP 915
             PP     P    S              APP
Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 16/66 (24%), Positives = 16/66 (24%)
 Frame = +3

Query: 717 PPXXXXXXPXXXXXPPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXP 896
           PP      P      P   P  P   PP P   P    P          P       P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198

Query: 897 PPXRXP 914
           P    P
Sbjct: 199 PKVPPP 204


>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 503

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = +3

Query: 87  PLVSQRPPLNLHKLTMNFAKILSFVFALVLALRMTSAAPEPRWKIFKKIEKMGRNIRDGI 266
           PL+   PP N+   + +     +  FAL +  R+ ++ P+P+        ++ R I D +
Sbjct: 146 PLLLSNPPRNMIGQSQSGTGKTA-AFALTMLSRVDASVPKPQAICLAPSRELARQIMDVV 204

Query: 267 VKAGPAIEV 293
            + G   EV
Sbjct: 205 TEMGKYTEV 213


>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 305

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = -2

Query: 806 GGGGGXGXXXGXGXGGGXXXXXGXXXXXGXXXXGXGXXXXXXXXXXGG 663
           GG GG G   G   GGG     G     G    G G          GG
Sbjct: 23  GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70


>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 331

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/47 (27%), Positives = 13/47 (27%)
 Frame = +3

Query: 759 PPXPXPXXPPXXPPPPXXXPXXPPPPXXXXXXXXXPXXXXXPXPXPP 899
           P  P P  PP    P    P    PP         P     P P  P
Sbjct: 99  PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 757 PPPXPXPXXXPXPPPPP 807
           P P P P     PPPPP
Sbjct: 732 PTPAPTPAVKHHPPPPP 748


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,527,472
Number of Sequences: 5004
Number of extensions: 45501
Number of successful extensions: 440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 503290872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -