Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I07
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 187 1e-47
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 187 1e-47
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 137 1e-32
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 136 2e-32
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 127 1e-29
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 90 2e-18
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 82 5e-16
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 6.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.2
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 8.2
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 187 bits (455), Expect = 1e-47
Identities = 83/152 (54%), Positives = 105/152 (69%)
Frame = +1
Query: 136 NNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 315
N+G SIP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 316 VTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTXQ 495
V RE+LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP +
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 496 SGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+GK+++SD DY++ WKA E K G SIG+
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGL 159
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 540 EGYGAAXQRGSGXEHRSPNFNSKQLERLLQXATVKPVVNQVECHP 674
+ + AA + G NF Q++R+ A VKP QVE HP
Sbjct: 143 KAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHP 187
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 187 bits (455), Expect = 1e-47
Identities = 83/152 (54%), Positives = 105/152 (69%)
Frame = +1
Query: 136 NNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 315
N+G SIP GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 316 VTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTXQ 495
V RE+LFITSK+WNTFH + L +L + Y+DL LIHWPQ Y E LFP +
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 496 SGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+GK+++SD DY++ WKA E K G SIG+
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGL 159
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 540 EGYGAAXQRGSGXEHRSPNFNSKQLERLLQXATVKPVVNQVECHP 674
+ + AA + G NF Q++R+ A VKP QVE HP
Sbjct: 143 KAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHP 187
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 137 bits (331), Expect = 1e-32
Identities = 64/165 (38%), Positives = 96/165 (58%), Gaps = 5/165 (3%)
Frame = +1
Query: 112 PKIPVVTFNNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAI 291
P VT N+G +PV G GTW+ + V+DA++ GYRHID A + N++EV I
Sbjct: 2 PIADTVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGI 61
Query: 292 TSKIKEGVVTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKED 471
K V RE+LF++SK+WNT+H + + E L+ Y+DL +IHWP + ED
Sbjct: 62 KDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAED 121
Query: 472 -----GSLFPTXQSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
L+P +GK+++SD DY++ WKA+E + G + SIG+
Sbjct: 122 EPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGL 166
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 594 NFNSKQLERLLQXATVKPVVNQVECHPLPHQKXLXSSVRLAG 719
NFN Q+E++ +KP V QVE +P Q+ + R G
Sbjct: 168 NFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKG 209
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 136 bits (330), Expect = 2e-32
Identities = 64/157 (40%), Positives = 102/157 (64%), Gaps = 2/157 (1%)
Frame = +1
Query: 127 VTFNNGESIPVFGLGTWKSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKI 303
+ N G +P+FGLGTW+ K E+T A++ A+D GYR ID A++Y NE +G+ + I
Sbjct: 6 IPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYI 65
Query: 304 KEGVVTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYK-EDGSL 480
G + RED+F+TSKL T H P+ V ++ L L ++Y+DLYLIH P +K ++GS
Sbjct: 66 SSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSF 125
Query: 481 FPTXQSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
P ++G++ ++ ++D W+A+E L KEG + ++GV
Sbjct: 126 APLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGV 162
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 594 NFNSKQLERLLQXATVKPVVNQVECHPLPHQKXLXSSVRLAG 719
NF+ QL+ L A VKP QVECH Q+ L + + G
Sbjct: 164 NFSCNQLQALYDAAEVKPANQQVECHIYWPQQELRALCKKLG 205
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 127 bits (306), Expect = 1e-29
Identities = 65/155 (41%), Positives = 90/155 (58%)
Frame = +1
Query: 127 VTFNNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 306
+ +NG +PV GLGTW+S P EV AVK A+ GYR ID A VY NE+ +G AI ++
Sbjct: 8 IKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLE 67
Query: 307 EGVVTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 486
EGVV RE+LFIT+K W P + G L+E+L L ++Y+DLYL H P A+ +D S
Sbjct: 68 EGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMS--- 124
Query: 487 TXQSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+ D W+ + + K GL ++GV
Sbjct: 125 -------EHIASPVEDVWRQFDAVYKAGLAKAVGV 152
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 120 bits (290), Expect = 1e-27
Identities = 62/162 (38%), Positives = 92/162 (56%)
Frame = +1
Query: 106 MAPKIPVVTFNNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGE 285
M+ K+P+ T +NG +P GLGTW+ E +++A+ GYRHID A +Y NE ++G+
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 286 AITSKIKEGVVTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYK 465
A+ EG++ RED+FIT+K + PD+V L+ +L L + Y+DLYL H P + K
Sbjct: 61 ALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTK 120
Query: 466 EDGSLFPTXQSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+DGS SD D W+ E + GL +IGV
Sbjct: 121 DDGSF----------RSDVKVEDIWRGFEKVYGLGLTKAIGV 152
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 89.8 bits (213), Expect = 2e-18
Identities = 50/153 (32%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Frame = +1
Query: 139 NGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVV 318
NG+ IP LGT+++K ++ AV +A+ +GYR D A Y NEK++G A+ + + +
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 319 TREDLFITSKL--WNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTX 492
ED+++TSK+ +++ + +L+ + E+L+ L+ +YLDL L+H+P+ +
Sbjct: 66 CSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTE----DLN 121
Query: 493 QSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
++ K+ D W A+E L EG + SIGV
Sbjct: 122 ENNKMYRK-----DTWIALEKLHAEGKIRSIGV 149
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 594 NFNSKQLERLLQXATVKPVVNQVECHPLPHQKXL 695
N+ +E + T++P VNQ+E HP +K L
Sbjct: 151 NYEPHHIEEMRSYITIEPQVNQIEYHPHFQRKVL 184
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = +1
Query: 148 SIPVFGLGTWKSKPGEVTQAVKDA-IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTR 324
++P+ G+GTW+ + E+ + V DA GYR ID A VY NE ++G + + + R
Sbjct: 10 NMPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKR 69
Query: 325 EDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTXQSGK 504
ED++ITSKL + ++E+L NL V+YLDL LIHWP GS +
Sbjct: 70 EDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP------GSSLKSENPAN 123
Query: 505 IQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+ V+ W M + EG + S+GV
Sbjct: 124 KKLR----VESWNVMCEMMAEGKLRSVGV 148
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 594 NFNSKQLERLLQXATVKPVVNQVECHPLPHQKXL 695
NF LE L + + V P VNQVE HP HQ L
Sbjct: 150 NFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDL 183
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Frame = +1
Query: 136 NNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 315
N+G +IP G GT+K V A+ A+ GYR D A Y NEKE+GEA+ + +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 316 VTREDLFITSKLW-NTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTX 492
++R D+F+TSK + + + + G ++E+L +L Y+D+YL+H+P+ D
Sbjct: 76 LSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDSDNDDVNNA 135
Query: 493 QSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGV 591
+ KI + + +E G V SIGV
Sbjct: 136 EYRKIAY---------EVLEEAKAAGKVRSIGV 159
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +1
Query: 127 VTFNNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 306
+ N G P+ GLGT+K +V + A+ GYR D A VY NEKE+G+A+ +
Sbjct: 3 IKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLP 62
Query: 307 EGVVTREDLFITSKLW-NTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAY 462
+ + RED+FIT+K+ NT V + E+L L Y+D+YLIH+P+++
Sbjct: 63 KHNLKREDIFITTKMHPNTVEN---VKKLVDESLSLLKTSYIDMYLIHYPKSF 112
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 82.2 bits (194), Expect = 5e-16
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +1
Query: 127 VTFNNGESIPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 306
+T +N S+P GLGTW+S +V AVK A+ GY ID A Y NE+ +G AI I
Sbjct: 48 LTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 307 EGVVTREDLFITSKLWNTFHRPDLV 381
EGVV REDLFIT+K+ N F LV
Sbjct: 108 EGVVKREDLFITTKVPNLFSSLRLV 132
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 70.5 bits (165), Expect = 2e-12
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +1
Query: 118 IPVVTFNNGESIPVFGLGTWKSKPGEVTQAVKDAID-IGYRHIDCAYVYGNEKEVGEAIT 294
IP +N +P+ GLGT S G AV +I GYR ID A YG EK++G A+
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAV- 59
Query: 295 SKIKEGVVTREDLFITSKLWNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQ 456
K V RE++F+++KLW D V Q + + L YLD+Y+IH PQ
Sbjct: 60 ---KNCSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQ 109
Score = 35.1 bits (77), Expect = 0.071
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 594 NFNSKQLERLLQXATVKPVVNQVECHPLPHQKXL 695
N++ + L+ LL+ A++ P NQVE HP HQ L
Sbjct: 144 NYSIEDLDELLEFASILPHANQVELHPWFHQADL 177
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 65.7 bits (153), Expect = 4e-11
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Frame = +1
Query: 133 FNNGESIPVFGLGTWKSKPGE-VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKE 309
F++G +P GLG + + + + +++ A+ GYR D A +Y NE +G ++ + +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 310 GVVTREDLFITSKLWN-TFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 486
+TRED+FIT+K+ + + L +L L Y+DL LIH+P+ ++ G+
Sbjct: 74 FGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRD-RDTGN--- 129
Query: 487 TXQSGKIQFSDXDYVDXWKAMEPLXKEGLVXSIGVPTXXXXXXXXXXXXXXXXXXXXXWN 666
+I S V W+ +E + G V SIGV +
Sbjct: 130 -DDDYEINKSRRKIV--WQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYE 186
Query: 667 VIPYLTR 687
PYLTR
Sbjct: 187 YQPYLTR 193
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +1
Query: 352 WNTFHRPDLVXGXLQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTXQSGKIQFSDXDYV 531
W P + G L+++L L+++Y+DLYL H P A+ +D S KI+ S
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDD-------MSQKIESS---VE 102
Query: 532 DXWKAMEPLXKEGLVXSIGV 591
D W+ + + K GL ++GV
Sbjct: 103 DIWRQFDAVYKAGLAKAVGV 122
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 454 GASVSGTDPSTERSDCPGSPAGHRXPSP 371
GAS G+ P+ E++ P PA PSP
Sbjct: 169 GASSGGSAPAAEKAPEPAKPAASSQPSP 196
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 452 PRPTRKTALSSRPXNQVKSSSRTSITWTPG 541
P TRK S P ++S SR S T TPG
Sbjct: 475 PPVTRKVRKSMMPSESIRSVSRNSSTSTPG 504
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 396 GDPGQSERSVLGSVPDTLAPGLQGR 470
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 396 GDPGQSERSVLGSVPDTLAPGLQGR 470
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 454 GASVSGTDPSTERSDCPGSPAGHRXPSPGDETCSTVSKL*TDL 326
G++ S +PS +D P +P SP ++ T+S++ T +
Sbjct: 3 GSTASPPEPSAPPADSPFAPVTQNDSSPTSDSTETMSRIPTGI 45
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 396 GDPGQSERSVLGSVPDTLAPGLQGR 470
G PGQ +S+ G V APGLQG+
Sbjct: 1260 GMPGQPGQSIAGPVGPPGAPGLQGK 1284
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 396 GDPGQSERSVLGSVPDTLAPGLQGR 470
G PGQ +S+ G V APGLQG+
Sbjct: 1261 GMPGQPGQSIAGPVGPPGAPGLQGK 1285
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 396 GDPGQSERSVLGSVPDTLAPGLQGR 470
G PGQ +S+ G V APGLQG+
Sbjct: 1297 GMPGQPGQSIAGPVGPPGAPGLQGK 1321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,039,500
Number of Sequences: 27780
Number of extensions: 350571
Number of successful extensions: 1461
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -