Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I06
         (987 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   4.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   8.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 79

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 80  RSTPPLST 87


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = +1

Query: 805 VPP-PXPPGXPPXXXXPSA 858
           VPP P PP  PP    PSA
Sbjct: 180 VPPLPLPPIFPPTMINPSA 198


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 403 HGRKLCQDHLQKLQPRSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPCGRTTE-CTS 579
           HG +       +LQP+  A  H QS   +  P+A    +   SS G + P   +T     
Sbjct: 64  HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123

Query: 580 RST-TLST 600
           RST  LST
Sbjct: 124 RSTPPLST 131


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 559 RTTECTSRSTTLSTTQ 606
           ++T  T R+TT+STT+
Sbjct: 440 KSTSTTQRTTTVSTTE 455


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 383 GKYFLTISCPLPTHSL*QYSMVFRLL 306
           G  F T+   +P H+  +Y  VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,090
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28030343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)