Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I06
(987 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 39 0.005
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.078
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.31
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 33 0.41
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.9
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 3.9
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 3.9
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 3.9
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 3.9
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 3.9
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 5.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.1
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 5.1
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 29 5.1
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 29 5.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 25 5.9
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 6.7
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 6.7
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 6.7
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 6.7
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 6.7
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 6.7
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.9
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 8.9
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 8.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.9
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 28 8.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 8.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 8.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.9
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG G GG G + G GG RGP G G G +G GG G GGG
Sbjct: 118 GGNNDGGWGGNNGGGGGGRGGGGRGGD--GRGPPGSNGGGDWGGNGGGGRGGGGGRGGGG 175
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = -2
Query: 983 GRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGAD--GXXXXGGXPGGXGG 810
GR GG G G G GG G G G G D G GG GG GG
Sbjct: 30 GRWGGWGGNRWGGGG------GPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
Query: 809 G 807
G
Sbjct: 84 G 84
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GG
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 806 TXXQXXXXLGRCXG 765
+ G C G
Sbjct: 144 SGGCGGGSSGGCGG 157
Score = 35.1 bits (77), Expect = 0.078
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXR---GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGX 816
GG GG GG G G GG G GG G G G GG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 815 GGG 807
GGG
Sbjct: 160 GGG 162
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GGG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCG----GGGGGCGGGG 135
Query: 806 TXXQXXXXLGRCXG 765
G C G
Sbjct: 136 GGGCGGGSSGGCGG 149
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG GGG
Sbjct: 141 GGSSGGCGGGSSGGCG------GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSG-GCGGGSS--GGCGGGGGGGCGGGGGGGCGG--GSSGGG 179
Query: 806 TXXQXXXXLGRCXG 765
G C G
Sbjct: 180 GYAVAPSGGGGCGG 193
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -2
Query: 974 GGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXG-GXPGGXGGG 807
GG GG G G GG P GG G G G G G GG GGG
Sbjct: 56 GGGCGGGGGGCG------GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGG 810
GG GG GG G GG P GG G+ G P G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GG
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 806 TXXQXXXXLGRCXG 765
+ G C G
Sbjct: 144 SGGCGGGSSGGCGG 157
Score = 35.1 bits (77), Expect = 0.078
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXR---GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGX 816
GG GG GG G G GG G GG G G G GG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 815 GGG 807
GGG
Sbjct: 160 GGG 162
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GGG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCG----GGGGGCGGGG 135
Query: 806 TXXQXXXXLGRCXG 765
G C G
Sbjct: 136 GGGCGGGSSGGCGG 149
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG GGG
Sbjct: 141 GGSSGGCGGGSSGGCG------GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G GG G GGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSG-GCGGGSS--GGCGGGGGGGCGGGGGGGCGG--GSSGGG 179
Query: 806 TXXQXXXXLGRCXG 765
G C G
Sbjct: 180 GYAVAPSGGGGCGG 193
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -2
Query: 974 GGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXG-GXPGGXGGG 807
GG GG G G GG P GG G G G G G GG GGG
Sbjct: 56 GGGCGGGGGGCG------GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGG 810
GG GG GG G GG P GG G+ G P G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.078
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GG GG GG G G GG G GG G G G P GGG
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Query: 806 TXXQXXXXLGRCXG 765
G C G
Sbjct: 122 CGGGGGGCGGGCGG 135
Score = 31.9 bits (69), Expect = 0.72
Identities = 22/70 (31%), Positives = 22/70 (31%)
Frame = -2
Query: 974 GGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGGGTXXQ 795
GG GG G G GG G G G G G GG G GGG
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 178
Query: 794 XXXXLGRCXG 765
G C G
Sbjct: 179 GGGGGGGCGG 188
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.31
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXXGXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGX--G 813
GG GG GG G G GG G GG G G GG GG G
Sbjct: 177 GGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
Query: 812 GGTXXQXXXXLGRCXGXE 759
GG G C E
Sbjct: 237 GGYGMGGGGGGGGCPNGE 254
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 116 CACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 271
CA + A ++LNY RT L+ +NC P TT + + A N + AP
Sbjct: 38 CATTCGACSNLNYTRTCLSD-GLKNCACVGEPTTTMLCNTIACNYPRGSEAP 88
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 848 PHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPPXXP 985
P P P P P PP A F P P PP P P
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCP 82
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +2
Query: 785 SXXLGXRYXLXXPXANPXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXP 964
S G + P P P P PP P PP P P P
Sbjct: 16 SSTFGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
Query: 965 PXPPXXP 985
P PP P
Sbjct: 76 PPPPPMP 82
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 514 TSILNSSVGSSLPCGRTTECTSRSTTLSTTQYLKMSTTXLQLXQSR 651
TSI+ +V S LP R + S T + + +MST+ LQ QSR
Sbjct: 132 TSIMPPAV-SKLPSPRVATSATASATNPNSNFPQMSTSRLQTPQSR 176
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 379 FPLNFRTHHGRKLCQDHLQKLQP-RSEARFHNQSLEMRELPTAMV*TSILNSSVGSSLPC 555
+P+ G+ Q Q Q RS A N +L+ + LP TSI +S+ GSS+
Sbjct: 160 YPVKVVEAGGQAYAQQVQQAQQSNRSGAAGVNSALQPKPLPPLSSITSISSSAAGSSISA 219
Query: 556 GRTTECTSRSTTLST 600
T++ ++ S+ +++
Sbjct: 220 PSTSQPSTTSSLITS 234
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -2
Query: 986 GGRXGGXXGGXXXXX-GXXKKXRGXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXGG 810
GG GG GG G + RG GG R G G G G G P G G
Sbjct: 48 GGDRGGFRGGRGGGDRGGFRGGRG-GGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGRG 106
Query: 809 G 807
G
Sbjct: 107 G 107
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 773 ISPXSXXLGXRYXLXXPXANPXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXX 952
++P R L P P R P PP P S TP FF P P
Sbjct: 199 VAPFKHNSPVRRQLVDPLPPLLQPSPVRFPAQPWQIPPLHPHQS-TPNPLTQFFQPIPQH 257
Query: 953 XXXPPXP 973
PP P
Sbjct: 258 LIPPPNP 264
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXG--GXPGGXGGG 807
G GG R RG GG G G G G G GG GGG
Sbjct: 9 GGGGFRGGRG-GGGGGGFRGGRGGDRGGGFRGGRGGFGGG 47
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 890 PXGGXXGXXXGADGXXXXGGXPGGXGGG 807
P G G GA G GG PGG GGG
Sbjct: 7 PSSGGGGGGGGASGGAG-GGAPGGGGGG 33
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 466 HNQSLEMRELPTAMV*TSILN-----SSVGSSLPCG-RTTECTSRSTTLSTTQYLKMSTT 627
H+Q M++LP ++ ++ SSV SS+ G + + C S S+T +T + T
Sbjct: 52 HHQLPHMQQLPQPLLNLNMTTLTSSGSSVASSIGGGAQCSPCASGSSTAATNSSQQQQTV 111
Query: 628 XLQLXQSRPC 657
L S PC
Sbjct: 112 GQMLAASVPC 121
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 466 HNQSLEMRELPTAMV*TSILN-----SSVGSSLPCG-RTTECTSRSTTLSTTQYLKMSTT 627
H+Q M++LP ++ ++ SSV SS+ G + + C S S+T +T + T
Sbjct: 52 HHQLPHMQQLPQPLLNLNMTTLTSSGSSVASSIGGGAQCSPCASGSSTAATNSSQQQQTV 111
Query: 628 XLQLXQSRPC 657
L S PC
Sbjct: 112 GQMLAASVPC 121
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 857 PLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P P PP A S S PP A P P PP PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 857 PLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P P PP A S S PP A P P PP PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 857 PLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P P PP A S S PP A P P PP PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 282
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 811 PPXPPGXPPXXXXPSAP 861
PP PPG P P AP
Sbjct: 215 PPGPPGPPGNDGQPGAP 231
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 808 PPPXPPGXP 834
PPP PPG P
Sbjct: 211 PPPGPPGPP 219
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 808 PPPXPPGXPPXXXXPSAPXXXP 873
PPP PP PP P+ P P
Sbjct: 483 PPPSPPALPPALPNPNEPPPPP 504
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 755 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 790
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 393
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 718 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 753
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 230 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 265
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 755 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 790
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 393
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 718 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 753
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 230 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 265
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 358 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 393
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 920 GXGGXRXXRGPXGGXXGXXXGADGXXXXGGXPGGXG 813
G G GP G G GADG G PG G
Sbjct: 697 GMPGLAGPPGPPGSGTGHGSGADGPQGPPGLPGAPG 732
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 174 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 284
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 893 GPXGGXXGXXXGADGXXXXGGXPGGXGGG 807
GP G G G +G GG GG G G
Sbjct: 781 GPTGSSGGGGGGGNGGSGGGGGGGGGGSG 809
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 821 PXANPXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXP 946
P P P P P PP PS PP P P
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 174 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 284
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 174 RPRGETVQQHPHRRLRQCCPSELGI*EPRQGLHHPEC 284
RP + V Q HRRL + PS + R G HHP C
Sbjct: 355 RPHRKNVIQRSHRRLLETGPS-VEENPMRSGEHHPLC 390
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 857 PLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P+ PP PS PP P P PP PP
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 34 TPLRFFGRLQGRSERLPNKMKLLVVFA-MCMLAASAGVVELSADTSNQDLEEKLYNSI 204
TP+RFF + ++ + M + FA +C + A G +L++ S+ D+E + +SI
Sbjct: 151 TPVRFFSIILNDNKIMITHMFATIFFATICAMTAILG-YDLNSHVSSSDMEHWMKHSI 207
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 821 PXANPXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXP 946
P P P P P PP PS PP P P
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 833 PXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P P P P PP P+ PP P P PP PP
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPT--IRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 833 PXXXXPHRPLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P P P P PP P+ PP P P PP PP
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPT--IRPPPIPASPPPRPP 336
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 857 PLXXPXXXPPXAPSXSXTPPXXAXFFXPXPXXXXXPPXPP 976
P+ PP PS PP P P PP PP
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,246,094
Number of Sequences: 27780
Number of extensions: 343814
Number of successful extensions: 1801
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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