Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I05
(905 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 55 7e-08
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 36 0.060
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 34 0.18
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 32 0.55
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 32 0.55
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 32 0.73
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 31 1.3
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 31 1.7
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 31 1.7
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 30 2.2
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 30 2.2
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_44068| Best HMM Match : SAA (HMM E-Value=0.73) 30 3.0
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 29 3.9
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 3.9
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 29 5.2
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 5.2
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 5.2
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 29 6.8
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 28 9.0
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 28 9.0
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 55.2 bits (127), Expect = 7e-08
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRYVHQ 457
ERRE+L+K+LVIG+LG GKTS+IKRYVHQ
Sbjct: 666 ERREYLFKVLVIGDLGVGKTSLIKRYVHQ 694
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSXVATV 657
TIGVDFALK W T I LQ W IA Q + A ++FD+ T+
Sbjct: 50 TIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTL 107
Score = 33.1 bits (72), Expect = 0.32
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYVH 454
+K+LV+G++ TGK S +KRYV+
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVN 40
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 36.3 bits (80), Expect = 0.034
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVH 454
E L+K+L++G+ GKTS ++RYVH
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVH 44
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 35.5 bits (78), Expect = 0.060
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +1
Query: 469 NTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSXV 648
NT TIGVDF ++ TI LQ WD A Q T A G +++DV+
Sbjct: 35 NTYISTIGVDFKIRTLTVDGKTI-KLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNES 93
Query: 649 AT 654
T
Sbjct: 94 ET 95
Score = 31.9 bits (69), Expect = 0.73
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVHQXLQST 472
++L+K+L+IG+ G GK+S++ R+ +T
Sbjct: 6 DYLFKLLLIGDSGVGKSSLLLRFADDTFSNT 36
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRY 448
E+R L++I V G G GKTSI+KR+
Sbjct: 3 EKRNSLHEIAVFGGAGVGKTSIVKRF 28
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 33.5 bits (73), Expect = 0.24
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSXVAT--- 654
TIGVDF ++ TI LQ WD A Q T A G +V+DV+ +
Sbjct: 61 TIGVDFKIRTIELDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNN 119
Query: 655 VRRCXQVAQXXXCXSPXXRXXGHXC 729
V++ Q C + G+ C
Sbjct: 120 VKQWLQEIDRYACENVNKLLVGNKC 144
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVHQXLQSTL 475
++L+K+L+IG+ G GK+ ++ R+ Q L
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFALSLAQKLL 37
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 32.3 bits (70), Expect = 0.55
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++LYKI++IG+ G GK+S++ R+
Sbjct: 10 DYLYKIVLIGDSGVGKSSLLSRF 32
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 478 EQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
+ T+GVDF ++V I LQ WD A Q + G I++D++
Sbjct: 43 DPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDIT 97
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 32.3 bits (70), Expect = 0.55
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++ +K+LV+G+ G GKTS+I+R+
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRF 31
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 31.9 bits (69), Expect = 0.73
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSXVAT 654
TIGVDF ++ N + LQ WD A Q T G +V+DV+ T
Sbjct: 9 TIGVDFKIRTINIDGEKV-KLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADT 64
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVHQXLQST 472
++L+K+L+IG+ G GKT I+ R+ +T
Sbjct: 7 DYLFKLLLIGDSGVGKTCILFRFSDDAFNTT 37
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 31.1 bits (67), Expect = 1.3
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+KI++IG+ G GK++++ RY
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRY 38
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/29 (37%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYV-HQXL 463
+H+Y+I ++G+ G GKT+++ R++ H+ L
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFL 31
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIGVDF +K N + I +Q WD A Q + A G I +DV+
Sbjct: 928 TIGVDFQIKTMN-VNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVT 979
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVH 454
E ++K++ IG+ G GK+S + R+ H
Sbjct: 894 ERVFKVVFIGDSGVGKSSFLHRFCH 918
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 30.3 bits (65), Expect = 2.2
Identities = 9/23 (39%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++++K+LV+G+ GK+S+I+R+
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRF 30
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 30.3 bits (65), Expect = 2.2
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 386 LYKILVIGELGTGKTSIIKRYV 451
+++++V+G G GKTS++KR++
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFI 128
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRYVHQXLQST 472
E +EHLYK+LVIGE G R++ Q + ST
Sbjct: 2536 EVKEHLYKVLVIGEYGVDDA---MRFLVQAILST 2566
>SB_44068| Best HMM Match : SAA (HMM E-Value=0.73)
Length = 209
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -2
Query: 439 DYGSLPCTQFADDEDLI*MLPAFSTSRCV*TAGVLLLFRRHNPWTQRQETQK*IRSD 269
DY L D D + LP + A LL+ RHN WT+ E + + D
Sbjct: 71 DYSILGFADLIKDFDALQYLPVYCDMTSEPGAYTLLVTSRHNQWTRHNEMRPSLSDD 127
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVHQXLQS 469
++++K+L+IG GKTS + RY S
Sbjct: 19 DYMFKLLIIGNSAVGKTSFLFRYADDSFTS 48
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
S + T+G+DF +K + + + LQ WD A Q T A G +++D+
Sbjct: 45 SFTSAFVSTVGIDFKVKTV-FRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI 103
Query: 640 S 642
+
Sbjct: 104 T 104
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 837 PSXPSATPXPXXSPXPPPSP 896
PS P P P SP PPP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQP 395
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 29.1 bits (62), Expect = 5.2
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRF 31
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.1 bits (62), Expect = 5.2
Identities = 8/21 (38%), Positives = 18/21 (85%)
Frame = +2
Query: 395 ILVIGELGTGKTSIIKRYVHQ 457
++++GE G+GKT+ + +Y+H+
Sbjct: 628 VIIVGETGSGKTTQLTQYMHE 648
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 377 REHLYKILVIGELGTGKTSIIKRY 448
+E L K L +G+ G GKTS++ +Y
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQY 126
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 377 REHLYKILVIGELGTGKTSIIKR 445
R L+K++++GE G GKTS+ R
Sbjct: 8 RGPLFKVVLLGEAGVGKTSLFYR 30
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/21 (42%), Positives = 19/21 (90%)
Frame = +2
Query: 392 KILVIGELGTGKTSIIKRYVH 454
K++++G+ +GKTS+++RY+H
Sbjct: 29 KVVLLGKEYSGKTSLVERYLH 49
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRYV 451
ER++ K +++G+ G GKTS++ Y+
Sbjct: 13 ERKKEQLKCVIVGDGGVGKTSLLVSYM 39
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 392 KILVIGELGTGKTSIIKRY 448
KIL++GE G GK+S++ R+
Sbjct: 10 KILIVGESGVGKSSLLLRF 28
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKR 445
+ +YKI + G++G GKTSI R
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTR 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,921,819
Number of Sequences: 59808
Number of extensions: 392714
Number of successful extensions: 1631
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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