Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I05
(905 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 38 0.012
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 35 0.085
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 34 0.11
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 34 0.11
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 34 0.15
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 33 0.26
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 33 0.34
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 33 0.34
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 33 0.34
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 33 0.34
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 32 0.45
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 32 0.45
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 32 0.60
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 32 0.60
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 31 0.79
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 31 0.79
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 31 1.1
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 31 1.1
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 31 1.1
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 31 1.4
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 31 1.4
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 31 1.4
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 31 1.4
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 31 1.4
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 31 1.4
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 31 1.4
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 30 1.8
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 30 1.8
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 30 1.8
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 30 1.8
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 30 1.8
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 30 1.8
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 30 1.8
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 30 1.8
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 30 1.8
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 30 2.4
At3g55950.1 68416.m06217 protein kinase family protein contains ... 29 3.2
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 29 3.2
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 29 3.2
At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containi... 29 3.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 29 3.2
At1g04390.1 68414.m00429 expressed protein 29 3.2
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 29 4.2
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 29 4.2
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 29 4.2
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 29 4.2
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 29 5.6
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 29 5.6
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 29 5.6
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 28 7.4
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 7.4
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 28 7.4
At1g76040.2 68414.m08829 calcium-dependent protein kinase, putat... 28 7.4
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 28 7.4
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 9.8
At1g32490.1 68414.m04009 RNA helicase, putative similar to ATP-d... 28 9.8
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 9.8
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVHQ 457
RR L K++V+G+ G GKTS++ +YVH+
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHK 31
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 34.7 bits (76), Expect = 0.085
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
S V + TIGVDF ++ TI LQ WD A Q T A G IV+DV
Sbjct: 32 SYVESYISTIGVDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 90
Query: 640 S 642
+
Sbjct: 91 T 91
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+L+IG+ G GK+ ++ R+
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRF 28
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVHQ 457
RR L K++++G+ G GKTS++ +YV++
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNK 31
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVHQ 457
RR L K++++G+ G GKTS++ +YV++
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNK 31
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVH 454
RR L K++++G+ G GKTS++ +YV+
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVN 30
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRY 448
R E+L+KI+VIG+ GK++++ RY
Sbjct: 51 REEYLFKIVVIGDSAVGKSNLLSRY 75
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
S +++ TIGVDF ++ TI LQ WD A Q T A G + +DV
Sbjct: 32 SYLDSYISTIGVDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 640 SXVATVRRCXQ 672
+ + + Q
Sbjct: 91 TDLESFNNVKQ 101
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+L+IG+ G GK+ ++ R+
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRF 28
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
S +++ TIGVDF ++ TI LQ WD A Q T A G + +DV
Sbjct: 32 SYLDSYISTIGVDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIVTYDV 90
Query: 640 SXVATVRRCXQ 672
+ + + Q
Sbjct: 91 TDLESFNNVKQ 101
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+L+IG+ G GK+ ++ R+
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRF 28
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +1
Query: 466 VNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSX 645
+++ TIGVDF ++ TI LQ WD A Q T A G IV+D +
Sbjct: 34 IDSYISTIGVDFKIRTIEQDGKTI-KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTE 92
Query: 646 VATVRRCXQ 672
+ + Q
Sbjct: 93 MESFNNVKQ 101
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 32.7 bits (71), Expect = 0.34
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRYVH 454
E+ ++++K++VIG+ GKT ++ R+ H
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTH 50
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVHQ 457
RR L K++++G+ G GKTS++ ++V++
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNR 31
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 374 RREHLYKILVIGELGTGKTSIIKRYVHQ 457
RR L K++++G+ G GKTS++ ++V++
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNR 31
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +1
Query: 469 NTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
N + TIG DF K I LQ WD A Q + V A +V+DV+
Sbjct: 35 NQYKATIGADFLTKEVQ-IDDRIFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN 91
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 31.9 bits (69), Expect = 0.60
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+KI++IG+ G GKT+I+ R+
Sbjct: 10 DYLFKIVLIGDSGVGKTNILSRF 32
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 31.9 bits (69), Expect = 0.60
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +2
Query: 386 LYKILVIGELGTGKTSIIKRYVHQ 457
L K++V+G+ G GKTS++ +YV++
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYK 32
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
SSV + TIGVDF +K + L WD A Q T A G +V+DV
Sbjct: 36 SSVEDLAPTIGVDFKIKQLT-VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDV 94
Query: 640 S 642
+
Sbjct: 95 T 95
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 469 NTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
NT + TIG+DF K T + LQ WD A Q + + A IV+DV+
Sbjct: 36 NTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA 92
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYVHQXLQST 472
YK++ +G+ GKTSII R+++ +T
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNT 37
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/21 (47%), Positives = 19/21 (90%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYV 451
+K+L++G+ GTGKT+ +KR++
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHL 34
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +2
Query: 392 KILVIGELGTGKTSIIKRY 448
KI+++G+ G GKTS++KRY
Sbjct: 7 KIILLGDSGVGKTSLLKRY 25
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVSXVAT 654
TIGV+FA + I+ Q WD A Q A GA +V+DV+ T
Sbjct: 45 TIGVEFATRRGIQVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVT 101
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTVELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 484 TIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDVS 642
TIG+DF ++ I LQ WD A Q T A G +V+DV+
Sbjct: 47 TIGIDFKIRTVELDGKRI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVT 98
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
E+L+KI++IG+ GK++++ RY
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRY 32
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/21 (42%), Positives = 19/21 (90%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYV 451
+K++++G+ GTGKT+ +KR++
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHL 34
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/21 (42%), Positives = 19/21 (90%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYV 451
+K++++G+ GTGKT+ +KR++
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHL 34
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/21 (42%), Positives = 19/21 (90%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYV 451
+K++++G+ GTGKT+ +KR++
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHL 34
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+KI++IG+ G GK++I+ R+
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRF 32
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 460 SSVNTIEQTIGVDFALKVXNWXSXTIIXLQXWDIARQSASGT*XVFITTXAXGAFIVFDV 639
SSV + TIGVDF +K + L WD A Q T + G +V+DV
Sbjct: 36 SSVEDLAPTIGVDFKIKQMKVRGKR-LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDV 94
Query: 640 S 642
+
Sbjct: 95 T 95
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
E+L+KI++IG+ GK++++ RY
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRY 32
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYVHQXLQST 472
YK++ +G+ GKTSII R+++ +T
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTT 37
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRY 448
E ++L+K+++IG+ G GK++++ R+
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRF 32
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+KI++IG+ G GK++I+ R+
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRF 32
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +2
Query: 371 ERREHLYKILVIGELGTGKTSIIKRY 448
E ++L+K+++IG+ G GK++++ R+
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLSRF 33
>At3g55950.1 68416.m06217 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
cytokinin-regulated kinase 1 [Nicotiana tabacum]
gi|10998537|gb|AAG25966
Length = 814
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 840 SXPSATPXPXXSPXPPPSPS 899
S PS P P P PPPSPS
Sbjct: 363 SPPSQFPLPPPPPPPPPSPS 382
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
+ LYK+++IG+ G GK++++ R+
Sbjct: 11 DFLYKVVLIGDSGVGKSNLLSRF 33
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +2
Query: 395 ILVIGELGTGKTSIIKRYVHQ 457
++++GE G+GKT+ I +Y+H+
Sbjct: 489 LIIVGETGSGKTTQIPQYLHE 509
>At1g69350.1 68414.m07958 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535: PPR repeat
Length = 787
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 444 RLIMEVFPVPNSPMTRILYKCSRRSALADA 355
RL+ E FP P+S M +L KC+ L DA
Sbjct: 54 RLVFEAFPYPDSFMYGVLIKCNVWCHLLDA 83
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRYVH 454
E+ +L++GE GTGKT++++ H
Sbjct: 665 EYNEPVLLVGETGTGKTTLVQNLAH 689
>At1g04390.1 68414.m00429 expressed protein
Length = 849
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 318 CRRNKSNTPAVHTHRLVLNAGSIYIRS 398
CR +P H+HR++L++G Y+R+
Sbjct: 671 CRMCSLTSPHAHSHRVILSSGCEYLRA 697
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRF 33
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRF 33
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRF 33
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRF 33
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 389 YKILVIGELGTGKTSIIKRYVHQXLQST 472
+K++ +G+ GKTSII R+++ +T
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTT 37
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 28.7 bits (61), Expect = 5.6
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
++L+K+++IG+ G GK++++ R+
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRF 33
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 837 PSXPSATPXPXXSPXPPPSP 896
P P+A P P P PPP P
Sbjct: 266 PPPPAAAPPPQPPPPPPPKP 285
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 846 PSATPXPXXSPXPPPSPS 899
PS +P P SP P PSPS
Sbjct: 533 PSPSPSPSPSPSPSPSPS 550
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Frame = +3
Query: 837 PSXPSATPX-----PXXSPXPPPSPS 899
PS PS TP P SP PPP+PS
Sbjct: 108 PSPPSLTPFVPHPTPKKSPSPPPTPS 133
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSIIKRY 448
E+L+KI++IG+ GK++++ R+
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRF 32
>At1g76040.2 68414.m08829 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]
Length = 534
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 840 SXPSATPXPXXSPXPPPSPS 899
S P++ P P P PPP PS
Sbjct: 44 SNPTSNPQPKPKPAPPPPPS 63
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 380 EHLYKILVIGELGTGKTSII 439
++L+K+L+IG+ G GK+S++
Sbjct: 11 DYLFKVLLIGDSGVGKSSLL 30
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 837 PSXPSATPXPXXSPXPPPSP 896
PS P +TP SP PPSP
Sbjct: 138 PSSPPSTPSTPSSPPSPPSP 157
>At1g32490.1 68414.m04009 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1044
Score = 27.9 bits (59), Expect = 9.8
Identities = 8/21 (38%), Positives = 18/21 (85%)
Frame = +2
Query: 395 ILVIGELGTGKTSIIKRYVHQ 457
++++G+ G+GKT+ I +Y+H+
Sbjct: 423 LVIVGDTGSGKTTQIPQYLHE 443
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 840 SXPSATPXPXXSPXPPPSPSXK 905
S P A P P P PPP P K
Sbjct: 20 SKPVAPPGPSPCPSPPPKPQPK 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,053,721
Number of Sequences: 28952
Number of extensions: 282461
Number of successful extensions: 1727
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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