Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_I02
(1307 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.038
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.066
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 7.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 10.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.038
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 1248 PPPXGGGXXPPPPXGGKXRXGF*XXPPPPXPXGGXXGG 1135
P P GG PPPP G G PPPP P GG
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAG--PPPPPPPPPAVSAGG 789
Score = 31.9 bits (69), Expect = 0.20
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 1054 PPPXPPXGXPPPXXXFFPXPXXXP--RXKXPXXPPPGXGGGXXXSKTXPXFSSXGGGXXX 1227
PPP P P P P P P P PPPG G P + GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 1228 XXP 1236
P
Sbjct: 793 YAP 795
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 1026 PPPXXPXXXXPPXPPXGXP-PPXXXFFSXPXALPPXKXPXXSPPXGGGGXXSXKNPPVXF 1202
PPP P P P P PP P PP PP G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-------PPGVAGAGPPPPPPPPPA 784
Query: 1203 LPXGGXGAXXPXP 1241
+ GG P P
Sbjct: 785 VSAGGSRYYAPAP 797
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 1202 PPXGGGGXXPPPXGGGWXXPPPAXXAPPPP 1291
P GG PPP G PPP PPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPP--PPPPPP 783
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 1027 PPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPP 1155
PPP P P P PP P P P PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 1014 GGXRPPPXXPXXXXPPXPPXGXPPP 1088
GG PPP P PP PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.066
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Frame = +3
Query: 1026 PPPXXPXXXXPPXP-PXGXPPPXXXFFSXPXALPPXKXPXXSPPXGGGGXXSXKNPPVXF 1202
PP P PP P P G PP A PP P +PP S PPV
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVP----KPSVAAPPVPAPSGAPPV---PKPSVAAPPVP- 1172
Query: 1203 LPXGGXGAXXPXPGXG-GXXPPXRXXPPXP 1289
P G P P G PP PP P
Sbjct: 1173 APSSGI-PPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 30.7 bits (66), Expect = 0.46
Identities = 22/89 (24%), Positives = 23/89 (25%), Gaps = 1/89 (1%)
Frame = +1
Query: 1027 PPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXP-PPGXGGGXXXSKTXPXFS 1203
P P P P P PP P P P P P G S P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 1204 SXGGGXXXXXPXRGXVGXAPPXGXXPPXP 1290
+ G V PP PP P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 1018 GXAPPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPPGXG 1164
G P P PP PP PP P P P P P G
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 1018 GXAPPPXXXXXXPP-PXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPPGXG 1164
G P P PP P P G PP P P + P P P G
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +3
Query: 1026 PPPXXPXXXXPPXPP-XGXPPPXXXFFSXPXALPPXKXPXXSPPXGG 1163
PP P PP PP PP P PP P P G
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 1024 APP-PXXXXXXPPPXPPXGXPP-PXXXFFPXPXXXPRXKXPXXPPP 1155
APP P PP PP PP P P P K P P P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 1018 GXAPPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPP 1155
G P P P P P G PP P P P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 7.6
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
Frame = +1
Query: 1024 APPPXXXXXXPP-PXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPPGXG--GGXXXSKTXP 1194
APP PP P P PP P P P P P G + P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 1195 XFSSXGGGXXXXXPXRGXVGXAPPXGXXPPXP 1290
P G V PP PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVG-VPPVPPPSTAPPVP 1220
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Frame = +1
Query: 1018 GXAPPPXXXXXXPP-PXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPPGXG 1164
G P P PP P P P P P P P P P G
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.12
Identities = 27/94 (28%), Positives = 29/94 (30%), Gaps = 8/94 (8%)
Frame = +3
Query: 1026 PPPXXPXXXXPPXPPXG-----XPPPXXXFFSXPXALPPXKXPXXSPPXGGGGXXSXKNP 1190
PPP P P PP G PP S P + PP P P G + P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 1191 P-VXFLP--XGGXGAXXPXPGXGGXXPPXRXXPP 1283
P P G A P P PP P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +3
Query: 1110 PXALPPXKXPXXSPPXGGGGXXSXKNPPVXFLPXGGXGAXXPXPGXGGXXPPXRXXPPXP 1289
P PP + PP G G S PP P P P G PP PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPP-PPRSNAAGSIPLPPQGRSAPP----PPPP 366
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 1018 GXAPPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPR-XKXPXXPPPGXGG 1167
G P P PPP PP P P P R P PPP G
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQ--PPPLSSSRAVSNPPAPPPAIPG 397
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 1148 PPXGXGGGGLXQKPXRXFPPXGGGGXXPPPXGGGWXXPPPAXXAPP 1285
PP G G P P G P P G PPP + P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 1.1
Identities = 31/135 (22%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 897 APPXAXGPXQGRXXGXXPRPPPXXPXXXXXXXXWXXFXXGGXRPPPXXPXXXXPPXPPXG 1076
APP A P + P P P P P P P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 1077 XPPPXXXFFSXPXALPPXKXPXXSPPXGGGGXXSXKNPPVXFLPXGGXG----AXXPXPG 1244
PP S P A+PP PP + + P F P G + P
Sbjct: 183 SPPSAP---SLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFP 239
Query: 1245 XGGXXPPXRXXPPXP 1289
G P PP P
Sbjct: 240 NRGPSIPSASVPPVP 254
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.4
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Frame = -3
Query: 1287 GGGAXXAGGGXXHPPPXGGGXXPPPPXGGK-----XRXGF*XXP----PPPXPXGGXXGG 1135
GGG GGG PPP GG GG+ GF P P GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 1134 FXXG 1123
F G
Sbjct: 247 FGGG 250
Score = 27.5 bits (58), Expect = 4.3
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -2
Query: 1240 GXGXXAPXP-PXGRKXTGGFLXEXXPPPPXGGXXXGXXXGGXAXGXEKXXXXGGGXPXGG 1064
G G P P P G GGF E GG G G G G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 1063 XGGXXLXGXXGGG 1025
GG G GGG
Sbjct: 254 FGGG--PGGFGGG 264
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 1192 GGFLXEXXPPPPXGGXXXGXXXGGXAXGXEKXXXXGGGXPXGGXGGXXLXGXXGGG 1025
GGF PPP G G G GG P G GG G GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 1024 APPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXP 1149
A PP PPP P PPP P P P P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 1029 PPXXPXXXXPPXPPXGXPPPXXXFFSXPXALPP-XKXPXXSPP 1154
PP P PP PPP P + PP P +PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +3
Query: 1056 PPXPPXGXPPPXXX--FFSXPXALPPXKXPXXSPP 1154
PP PP PPP + P + PP P S P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 8/57 (14%)
Frame = +1
Query: 1009 LXGGXAP------PPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXK--XPXXPPP 1155
L GG AP PP PP PPP P P P P PPP
Sbjct: 1677 LFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 1024 APPPXXXXXXPPPXPPXGXPPPXXXFFPXPXXXPRXKXPXXPPPG 1158
AP P PP PP P P P P P P PG
Sbjct: 1704 APTPPPPPMSVPP-PPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 1069 PXGXPPPXXXFFPXPXXXPRXKXPXXPPPG 1158
P G PPP P P P + P PPPG
Sbjct: 5 PPGNPPPPP---PPPGFEPPSQPPPPPPPG 31
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 1017 GXRPPPXXPXXXXPPXPPXGXPPP 1088
G PPP P PP P PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 1242 PXGGGXXPPPPXGGKXRXGF*XXPPPPXPXG 1150
P G PPPP G + PPPP P G
Sbjct: 5 PPGNPPPPPPPPGFEPP----SQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 1009 LXGGXAPPPXXXXXXPPPXPPXGXPPP 1089
L G PPP PP P PPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = -1
Query: 1166 PPXPGGGXXGXFXRGXXXGX--GKKXXXGG--GXPXGGXGGGXXXXXXGG 1029
P P G G RG G G+ GG G GG GGG GG
Sbjct: 124 PKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 1229 PPPXGGGWXXPPPAXXAPPPPXXG 1300
PPP PA +PPPP G
Sbjct: 909 PPPPTASMTASAPAIASPPPPKVG 932
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,423,540
Number of Sequences: 5004
Number of extensions: 34865
Number of successful extensions: 292
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 715384080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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