Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_I01
         (973 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   7.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.3  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          22   7.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.3  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = -3

Query: 836 GXGRXXGGGXXXGGXGXXXXXXXXGGGXGGG 744
           G G    GG   G  G         GG GGG
Sbjct: 21  GPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 183 KACSHIGSVVGSSLMTDVKHAAMRTPVIRKSTDLNMTSL 67
           +A  H GS +  S +    H  +    IR++  +N TSL
Sbjct: 133 RAACHSGSSLTKSRLMRCLHHDIENAHIRRTLHMNRTSL 171


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 204 TPTLSYIRTTRRRRSVKNSFTEA 272
           T  ++ + TTRR RSV N F  +
Sbjct: 56  TLVIAAVITTRRLRSVTNCFVSS 78


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 745  PPPXPPPS 768
            PPP PPPS
Sbjct: 1356 PPPPPPPS 1363


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 92  LFLITGVLIAACLTSVMSDEPTTEPICEQAFG 187
           + L+ GVL+    T ++   PTT     Q FG
Sbjct: 555 IILLAGVLVCYLNTFLLLATPTTVTCILQRFG 586


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 76  HVEISAFPDHGRSHRCVL 129
           HV+IS  P+   S RC +
Sbjct: 70  HVDISFLPEKSTSSRCAV 87


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 92  LFLITGVLIAACLTSVMSDEPTTEPICEQAFG 187
           + L+ GVL+    T ++   PTT     Q FG
Sbjct: 645 IILLAGVLVCYLNTFLLLATPTTVTCILQRFG 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,792
Number of Sequences: 438
Number of extensions: 7750
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32048835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)