Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H24
(970 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.026
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.75
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 29 1.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.0
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.9
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.2
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/129 (24%), Positives = 34/129 (26%), Gaps = 2/129 (1%)
Frame = +1
Query: 583 PPXRXSXKXXPPXXXXXXPXPP-PGXINHXXGPXPPWXPXPXGAPPXXPPXPX*PEHLXP 759
PP PP PP P P P P P PP P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 760 XXSPFXKPVXPXPH-XPXPVRXSXXRVLXXLXPNXXXXXXPPPXXXPXPPLSRYXXPXXS 936
+P P P P PV + P PPP P P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Query: 937 PPRXXPLXP 963
PP P P
Sbjct: 1212 PPSTAPPVP 1220
Score = 36.3 bits (80), Expect = 0.006
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPX-PLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXP 904
P P P PS P P PP P P P PPP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 905 PYPGTXXPXXPPPXT 949
P P P PPP T
Sbjct: 1201 PKPSVGVPPVPPPST 1215
Score = 33.9 bits (74), Expect = 0.035
Identities = 23/94 (24%), Positives = 26/94 (27%)
Frame = +1
Query: 682 PPWXPXPXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXPXPVRXSXXRVLXXLXPNX 861
PP GAP PP P + +P P P P PV P+
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 862 XXXXXPPPXXXPXPPLSRYXXPXXSPPRXXPLXP 963
P P P P P P P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXN--PXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHX 901
P P P PS P P PP P A P P+ P PPP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK-PSVGVPPVPPPSTAPP 1218
Query: 902 PPYPGTXXPXXPPP 943
P P P P P
Sbjct: 1219 VPTPSAGLPPVPVP 1232
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPP 907
P P + PS P P PP P A P+ P P P P
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Query: 908 YPGTXXPXXPPP 943
P P P P
Sbjct: 1125 KPSVAAPPVPVP 1136
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +2
Query: 734 PLNRNTCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRP---SXPTXXXXPXPPPXXPHXP 904
PL R P P PL PP P A P S P P P
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 905 PYPGTXXPXXPPP 943
P P + P P P
Sbjct: 1067 PAPSSEIPSIPAP 1079
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Frame = +2
Query: 767 PPSXNPXPLXPXPPPPXAXPXFAXXR--PSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPP 940
PP P P P P A P P P P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 941 PXTXHLXPP 967
P PP
Sbjct: 1172 PAPSSGIPP 1180
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPS-XNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXP 904
P P P PPS P P PP P A P+ P+ P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT-PSAGLPPVPVPTAKAPP 1238
Query: 905 -PYPGTXXPXXPPP 943
P P + P P
Sbjct: 1239 VPAPSSEAPSVSTP 1252
Score = 27.5 bits (58), Expect = 3.0
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = +1
Query: 694 PXPXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXPXPVRXSXXRVLXXLXPNXXXXX 873
P P APP PP L S K P PV S L + P
Sbjct: 961 PRP-AAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSS 1019
Query: 874 XPPPXXXPXPPLSRYXXPXXSPPRXXPLXPP 966
PP P P +PP P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Score = 26.6 bits (56), Expect = 5.3
Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Frame = +1
Query: 685 PWXPXPXG-APPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXPXPVRXSXXRVLXXLXPNX 861
P P P APP P P + P K P P PV + P+
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 862 XXXXXPPPXXXPXPPLSRYXXPXXSPPRXXPLXP 963
P P P S P P P P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 26.2 bits (55), Expect = 6.9
Identities = 27/112 (24%), Positives = 31/112 (27%), Gaps = 10/112 (8%)
Frame = +1
Query: 637 PXPPPGXINHXXG-PXP---PWXPXPXGAPPXX------PPXPX*PEHLXPXXSPFXKPV 786
P P P + P P P P P G PP PP P + P +P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 787 XPXPHXPXPVRXSXXRVLXXLXPNXXXXXXPPPXXXPXPPLSRYXXPXXSPP 942
P P P P+ P P P P P P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/70 (25%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = +2
Query: 767 PPSXNPXPLXPXPPPPXAXPXF---AXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXP 937
PP P P P P P + P P P P PP P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 938 PPXTXHLXPP 967
P PP
Sbjct: 1181 VPKPAAGVPP 1190
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Frame = +1
Query: 613 PPXXXXXXPXPPPGXINHXXGPXPPWXPXPXG----APPXXPPXPX*PEHLXPXXSPFXK 780
PP PP + P PP P P +PP PP P P + P + K
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 781 PVXPXP 798
P P P
Sbjct: 290 PPLPPP 295
Score = 35.1 bits (77), Expect = 0.015
Identities = 28/88 (31%), Positives = 28/88 (31%), Gaps = 8/88 (9%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPX----PLXPXPP--PPXAXPXFAXXRP-SXPTXXXXPXP-P 883
P P P PP N P P PP PP A P P S P P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 884 PXXPHXPPYPGTXXPXXPPPXTXHLXPP 967
P P PP P P P PP
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 33.9 bits (74), Expect = 0.035
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPP 907
P P RN P + L P PPPP + A P P P PPP P P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA--AGSIPLPPQGRSAPPPPP--PRSAP 370
Query: 908 YPGTXXP 928
G P
Sbjct: 371 STGRQPP 377
Score = 32.3 bits (70), Expect = 0.11
Identities = 27/110 (24%), Positives = 34/110 (30%)
Frame = +1
Query: 637 PXPPPGXINHXXGPXPPWXPXPXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXPXPV 816
P PPP ++ G P P APP PP P + V P P +
Sbjct: 337 PPPPPPPRSNAAGSIP-LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Query: 817 RXSXXRVLXXLXPNXXXXXXPPPXXXPXPPLSRYXXPXXSPPRXXPLXPP 966
L L P P PP + P +PP P+ P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP-SLPMGAP 444
Score = 30.7 bits (66), Expect = 0.32
Identities = 23/88 (26%), Positives = 26/88 (29%), Gaps = 1/88 (1%)
Frame = +1
Query: 643 PPPGXINHXXGPXPPWXPX-PXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXPXPVR 819
PP G + P P P P APP PP P P P P P+
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA-------PPSLPMGAPAAPPLPPSAPIA 456
Query: 820 XSXXRVLXXLXPNXXXXXXPPPXXXPXP 903
+ P PPP P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 30.7 bits (66), Expect = 0.32
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +2
Query: 758 PXXPPSXNPXPLXPXPPP--PXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPX 931
P PPS P L P PP P P PS P P P P PP P
Sbjct: 421 PSLPPSA-PPSLPPSAPPSLPMGAPAAPPLPPSAPIA---PPLPAGMPAAPPLPPAAPAP 476
Query: 932 XPPP 943
P P
Sbjct: 477 PPAP 480
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.026
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 788 PLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPP 943
P P PP A + S PT P P P PP P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 583 PPXRXSXKXXPPXXXXXXPXPPPGXINHXXGPXPPWXPXPXGAPPXXPPXP 735
PP R PP P PPP + P PP P PP PP P
Sbjct: 1690 PPVRPQ-SAAPPQMSAPTPPPPPMSV-----PPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 676 PXPPWXPXPXGAPPXXPPXPX*PEHLXPXXSPFXK-PVXPXP 798
P PP P PP PP P P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +2
Query: 767 PPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPP 943
PP + P P PP P A P+ P P PP PP P + P P P
Sbjct: 1699 PPQMSA-PTPPPPPMSVPPPPSAPPMPAGP-----PSAPP-----PPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/55 (23%), Positives = 18/55 (32%)
Frame = +2
Query: 734 PLNRNTCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPH 898
P+ + P + P P PPP + P PS P P P+
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.035
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +2
Query: 767 PPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPPX 946
P S P P P PP P + P P P+ P P PP P PP
Sbjct: 140 PTSAPPRPSIP-PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP-SAPSLPSAVPPM 197
Query: 947 TXHLXPP 967
+ PP
Sbjct: 198 PPKVPPP 204
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = +1
Query: 676 PXPPWXPXPXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXP-HXPXPVRXSXXRVLXXLX 852
P PP P PP P P P P P P P + +
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 853 PNXXXXXXPPPXXXPXPPLSR 915
P+ P P P PPLS+
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQ 208
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/76 (23%), Positives = 21/76 (27%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPP 907
P P + PP + P P P P A PS PPP P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Query: 908 YPGTXXPXXPPPXTXH 955
+ P P H
Sbjct: 212 ANTSSRPSSFAPPAGH 227
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = +2
Query: 767 PPSXN--PXPLXPXPPPPXAXPXFAXXRPSXPTXXXXP-XPPPXXPHXPPYPGTXXPXXP 937
PPS P P PP A P + PS + P PP PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 938 PPXTXHL 958
PP L
Sbjct: 184 PPSAPSL 190
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 583 PPXRXSXKXXPPXXXXXXPXPPPGXINHXXGPXPPWXPXPXGAPPXXPPXP 735
PP P P PPP I P PP PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 797 PXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPP 943
P PPP P A P PP P P G P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.32
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 749 TCXPXXPPSXNPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPP 886
T P P P P+ PPPP P A P P P PPP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP-----PPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +2
Query: 797 PXPPPPXAX---PXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPP 943
P PPPP P A P PPP P G P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +2
Query: 758 PXXPPSXNPXPLX-PXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPP 907
P P P P P P PP A P P P PP P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.75
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +2
Query: 767 PPSXNPXPLXPXPPPPXAXPXFA----XXRPSXPTXXXXP----XPPPXXPHXPPYPGT 919
P +P P P PPPP P PS PPP P PP P T
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPT 287
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 803 PPPPXAXPXFAXXRPSXPTXXXXPXPPPXXP 895
PPP P A S P+ P PPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +2
Query: 779 NPXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXPXXPPP 943
NP P P + P PT P P PH PP+P PPP
Sbjct: 140 NPQVQSYCRPEPLSSNHVRSCPPFPPTQHHHPHTRP--PHHPPHPHFHNNNYPPP 192
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Frame = +1
Query: 643 PPPGXINHXXGPXPPWXPX----PXGAPPXXPPXPX*PEHLXPXXSPFXKPVXPXPHXP 807
P P NH PP+ P P PP PP P + P F PV P P
Sbjct: 149 PEPLSSNHVRS-CPPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVP 206
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 878 PPPXXPHXPPYPGTXXPXXPPPXTXHLXPPG 970
PP P PP PG P PPP PPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP----PPPG 31
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 673 GPXPPWXPXPXGAPPXXPPXPX*PEHL 753
G PP P P PP PP P P ++
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYV 33
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 746 NTCXPXXPPSXNPXPLXPXPPPP 814
N P PP P P PPPP
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPXPLXPXPPPP-XAXPXFAXXRPSXPTXXXXPXPPPXXPHXP 904
P P++ PP + P PPPP P P PPP H P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 905 PYPGTXXPXXPPPXTXHLXPP 967
P P H+ PP
Sbjct: 269 GEHMPPPPMHHEPG-EHMPPP 288
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = +2
Query: 728 PXPLNRNTCXPXXPPSXNPXPLXPXPPPP-XAXPXFAXXRPSXPTXXXXPXPPPXXPHXP 904
P P++ PP + P PPPP P P PPP H P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 905 PYPGTXXPXXPPPXTXHLXPP 967
P P H+ PP
Sbjct: 321 GEHMPPPPMHHEPG-EHMPPP 340
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.3
Identities = 28/94 (29%), Positives = 29/94 (30%)
Frame = -3
Query: 965 GGXSGXXRGGX*XGXLYRDKGGXGXXKGGGXXXXXXLGXRXXXTRXWXKRTGXGXWGXGX 786
GG G GG G GG G G G G G G +G G
Sbjct: 187 GGGFGGFGGGS--GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 785 TGFXKGXKXGXRCSG*XGXGGXXGGAPXGXGXQG 684
GF G G G G GG P G G G
Sbjct: 245 GGFGGGL------GGFGGGPGGFGGGPGGHGGPG 272
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 797 PXPPPPXAXPXFAXXRPSXPTXXXXPXPPP 886
P PPPP A P A + PT P PP
Sbjct: 1882 PPPPPPMALPK-AGPPSAAPTSALPPAGPP 1910
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 782 PXPLXPXPPPPXAXPXFAXXRPSXPTXXXXPXPPPXXPHXPPYPGTXXP 928
P P PP P P P P P P PP P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3
Query: 818 RTGXGXWGXGXTGFXKGXKXGXRCSG*XGXGGXXGGAPXGXGXQGG 681
R G G + G GF G + G R GG GGA G G +GG
Sbjct: 15 RGGRGGFNGGRGGFG-GGRGGAR-------GGGRGGARGGRGGRGG 52
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 9.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 6/75 (8%)
Frame = +2
Query: 734 PLNRNTCXPXXPPSXNPX--PLXPXPPPPXAXPXFAXXRPSXPTXXXXPX----PPPXXP 895
P T P P + P PL P P P P P P P P P
Sbjct: 484 PFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYP 543
Query: 896 HXPPYPGTXXPXXPP 940
P PG PP
Sbjct: 544 AVPAMPGIPGATAPP 558
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,590,219
Number of Sequences: 5004
Number of extensions: 44070
Number of successful extensions: 328
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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