Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H23
(960 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 4e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.034
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.10
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.74
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.97
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 1.3
SPBC1347.08c |||ribonuclease H2 complex subunit|Schizosaccharomy... 27 3.0
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 3.0
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 27 5.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.9
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 26 9.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 4e-04
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSXPPXPX-----PPXXXXRPXXSXPXXGXXPXPPPXXPXX 909
PP P PP P P + P P PP P + P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAPPLPPAA 473
Query: 910 XLPPPXPXXXPPXPPXS 960
PPP P P P S
Sbjct: 474 PAPPPAPAPAPAAPVAS 490
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXX-----SXPPXPXPPXXXXRPXXSXPXXGXXPXP------P 891
PP P P P P S PP P PP S P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 892 PXXPXXXLPPPXPXXXPPXPP 954
P P + PP P P PP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPP 468
Score = 34.3 bits (75), Expect = 0.026
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Frame = +2
Query: 731 SXXXVPPXPXXPXXPPXXXPPXXXXXXPPXXP------PPXXXXGPPXPPXXGGXXPXPP 892
S PP P P PP PP PP P PP P PP G P P
Sbjct: 410 SRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG-MPAAP 467
Query: 893 XXXPXXXSRXPXPXXXXPXP 952
P + P P P
Sbjct: 468 PLPPAAPAPPPAPAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.079
Identities = 24/81 (29%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Frame = +1
Query: 742 RPPXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXR---PXXSXPXXGXXPXPPPXXPXXX 912
+PP P PP PP P PP R P + P PPP
Sbjct: 289 KPPLP-PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 913 -----LPPPXPXXXPPXPPXS 960
LPP PP PP S
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRS 368
Score = 31.1 bits (67), Expect = 0.24
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 804 LXPPPPXPPXXXPPAXPLXPXXGXXXPPPP 893
L PPPP P + PL P PPPP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 29.5 bits (63), Expect = 0.74
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 14/85 (16%)
Frame = +1
Query: 742 RPPXPXPPX------PPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPP--- 894
RPP P PP PP S PP P PP P G PPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNS--SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 895 XXPXXXLPPP-----XPXXXPPXPP 954
P PP PP PP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 29.5 bits (63), Expect = 0.74
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 11/81 (13%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSX-----PPXPXPPXXXXRPXXSXPXXGXX------PXPP 891
PP P P P P S PP P PP R + P G P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP-PPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 892 PXXPXXXLPPPXPXXXPPXPP 954
P PP P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLP 440
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 805 SXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPXPXXXPPXP 951
S PP P P RP P P PPP P P PP P
Sbjct: 228 SAPPIP-PSIPSSRPPERVPSLSA-PAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +3
Query: 708 PPAXXPFXXXXXSPPPXPXXPXXXXXXXXXXXLXPPPPXPPXXXP-PAXPLXPXXGXXXP 884
PP P SPP P P PP PP A L P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 885 PPP 893
PPP
Sbjct: 314 PPP 316
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = +2
Query: 755 PXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPX-PPXXGGXXPXPPXXXP 904
P PP PP PP P PP PP G PP P
Sbjct: 224 PTSTSAPPI--PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Frame = +1
Query: 742 RPPXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPP------XXP 903
+P PP P P S P P P P G P PPP P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Query: 904 XXXLPP-PXPXXXPPXPPXS 960
+PP P P PP P S
Sbjct: 1204 SVGVPPVPPPSTAPPVPTPS 1223
Score = 33.9 bits (74), Expect = 0.034
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +1
Query: 748 PXPXPPXP-PXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPP 924
P PP P P P S P P P P P G P P P +PPP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 925 XPXXXPPXPPXS 960
PP P S
Sbjct: 1195 SEA--PPVPKPS 1204
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Frame = +1
Query: 745 PPXPXPP--XPPXXXXXXXPXXSXPPXPXP--PXXXXRPXXSXPXXGXXPXPPPXXPXXX 912
PP P P PP P P P P P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 913 LPPPXPXXXPPXPPXS 960
+P P PP PP S
Sbjct: 1181 VPKP-AAGVPPVPPPS 1195
Score = 29.9 bits (64), Expect = 0.56
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSX-PPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPP 921
P P P P P S PP P P P S PP P +PP
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA------PPVPKPSVAVPP 1113
Query: 922 -PXPXXXPPXPPXS 960
P P PP P S
Sbjct: 1114 VPAPSGAPPVPKPS 1127
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSRXP 925
PP P PP P P P P PP P G P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAA----PPVPAPSSGI-PPVPKPAAGVPPVPP---PSEAPPVP 1201
Query: 926 XPXXXXPXPP 955
P P P
Sbjct: 1202 KPSVGVPPVP 1211
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +3
Query: 705 VPPAXXPFXXXXXSPPPXPXXPXXXXXXXXXXXLXPPPPXPPXXXPPA-XPLXPXXGXXX 881
+PP P PPP P + PP PP P A P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEA-PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 882 PPPP 893
PP P
Sbjct: 1237 PPVP 1240
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSRXP 925
PP P PP PP P P P P G PP P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI-PSIPAPSGA----PPVPAPSGIPPVP 1095
Query: 926 XPXXXXPXPP 955
P P P
Sbjct: 1096 KPSVAAPPVP 1105
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 4/64 (6%)
Frame = +1
Query: 745 PPXPXPP--XPPXXXXXXXPXXSXPP--XPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXX 912
PP P P PP P P P P P P G P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 913 LPPP 924
+P P
Sbjct: 1239 VPAP 1242
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +1
Query: 748 PXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPX 927
P PP P P S PP PP S PP PP
Sbjct: 966 PPSIPPPLPVSNILSSPT-SEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPV 1024
Query: 928 PXXXPPXPP 954
P PP
Sbjct: 1025 PLPSADAPP 1033
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 743 VPPXPXXPXXPPXXXPPXXXXXXP-PXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSR 919
VPP P PP P P P PP PP PP P +
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKP-SVAA 1168
Query: 920 XPXPXXXXPXPP 955
P P PP
Sbjct: 1169 PPVPAPSSGIPP 1180
Score = 26.6 bits (56), Expect = 5.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPP 924
PP P P P P + PP P P P S PP P P P
Sbjct: 1112 PPVPAPSGAPPVPK---PSVAAPPVPVPSGAPPVPKPSVAA------PPVPAPSGAPPVP 1162
Query: 925 XPXX-XPPXPPXS 960
P PP P S
Sbjct: 1163 KPSVAAPPVPAPS 1175
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +2
Query: 743 VPPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSRX 922
+PP P P PP P P P P PP P P P
Sbjct: 1178 IPPVPK----PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP----V 1229
Query: 923 PXPXXXXPXPP 955
P P P P
Sbjct: 1230 PVPTAKAPPVP 1240
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/71 (25%), Positives = 18/71 (25%), Gaps = 1/71 (1%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXP-PXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSRX 922
PP P P P P P PP PP PP P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 923 PXPXXXXPXPP 955
P P P P
Sbjct: 1124 PKPSVAAPPVP 1134
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/63 (23%), Positives = 16/63 (25%)
Frame = +3
Query: 705 VPPAXXPFXXXXXSPPPXPXXPXXXXXXXXXXXLXPPPPXPPXXXPPAXPLXPXXGXXXP 884
+PP P P P P P PP P P P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 885 PPP 893
P P
Sbjct: 1151 PVP 1153
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/65 (23%), Positives = 16/65 (24%)
Frame = +3
Query: 699 ITVPPAXXPFXXXXXSPPPXPXXPXXXXXXXXXXXLXPPPPXPPXXXPPAXPLXPXXGXX 878
+ PP P P P P P PP P P P
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Query: 879 XPPPP 893
PP P
Sbjct: 1226 LPPVP 1230
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 744 SPPPXPXXPXXXXXXXXXXXLXPPPPXPPXXXPPAXPLXPXXGXXXPPPP 893
SPPP P P + PPP P PP P P PPPP
Sbjct: 731 SPPPPP--PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 32.7 bits (71), Expect = 0.079
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +2
Query: 764 PXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPX---XGGXXPXPPXXXPXXXS 916
P PP P P PP GPP PP G P PP P S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = +1
Query: 760 PPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPXPXXX 939
PP PP P + P P PP P G P PPP PP P
Sbjct: 732 PPPPPP--AVIVPTPAPAPIPVPP--------PAPIMGGPPPPPPPPGVAGAGPPPP--- 778
Query: 940 PPXPP 954
PP PP
Sbjct: 779 PPPPP 783
Score = 30.7 bits (66), Expect = 0.32
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXPPXXPPP 832
PP P PP PP PP PPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.56
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 743 VPPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPP 862
+ P P P P PP PP GPP PP
Sbjct: 740 IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Frame = +2
Query: 725 LXSXXXVPPXPXXPXXPPXXXP---PXXXXXXPPXXPPPXXXXG---PPXPP 862
L S PP P P P P PP PPP G PP PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/66 (24%), Positives = 17/66 (25%)
Frame = +1
Query: 754 PXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPXPX 933
P PP P P P P P P P PPP P +
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 934 XXPPXP 951
P P
Sbjct: 792 YYAPAP 797
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 743 VPPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXGG 874
VPP PP PP P PPP PP GG
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAGAGPPPPPP-----PPPAVSAGG 789
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXGGXXPXPPXXXPXXXSRXP 925
PP P P PP PP P P P P PP P S+ P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 33.1 bits (72), Expect = 0.060
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 6/76 (7%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXP-PXXPPPXXXXGPP-----XPPXXGGXXPXPPXXXPX 907
PP P PP PP P P PP PP PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 908 XXSRXPXPXXXXPXPP 955
S P P PP
Sbjct: 190 LPSAVPPMPPKVPPPP 205
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 8/75 (10%)
Frame = +1
Query: 754 PXPPXPPXXXXXXXPXXSXP-----PXPXPPXXXXRPXXSXPXXGXXPXP-PPXXPXXXL 915
P P PP P S P P P P P + P P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 916 P--PPXPXXXPPXPP 954
P P P PP PP
Sbjct: 185 PSAPSLPSAVPPMPP 199
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Frame = +1
Query: 742 RPPXPXPPXP---PXXXXXXXPXXSX-PPXPX---PPXXXXRPXXSXPXXGXXPXPPPXX 900
RPP PP P P P S PP P PP P S P P P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 901 PXXXLPPP 924
P PPP
Sbjct: 198 PPKVPPPP 205
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 298 PAFPKSPSSFCPKVPKTLPPPICLSQVTSRGCR 200
P+ P PS+ P PK PPP+ + V + R
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -2
Query: 953 GGXGGFXXGXGGGXXXXGXXGGGXGXXPXXGXEXXGRXXXXGGXGXGGXEXXG 795
GG GGF G GG G GGG G G G G G GG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGF-GGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 953 GGXGGFXXGXGGGXXXXGXXGGGXGXXPXXGXEXXGRXXXXGGXG 819
GG GGF G GG G GG G G GR GG G
Sbjct: 23 GGRGGFGGGRGGA--RGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +2
Query: 749 PXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPP-XPPXXGGXXPXPPXXXP 904
P P P PP PP PPP PP PP G PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPP 924
P P P P S P P PP P + P P PP P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP----MPAGPPSAP----PPP 1734
Query: 925 XPXXXPPXPP 954
P P P
Sbjct: 1735 LPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.32
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 810 PPPPXPPXXXPPAXPLXPXXGXXXPPPP 893
PPPP PP+ P P PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 814 PXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPXPXXXPPXPPXS 960
P PP RP + P P PPP P +PPP P P S
Sbjct: 1686 PVSTPPV---RPQSAAPPQMSAPTPPP--PPMSVPPPPSAPPMPAGPPS 1729
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 746 PPXPXXPXXPPXXXPPXXXXXXPPXXPPPXXXXGPPXPPXXG 871
PP P PP PP P PPP P P G
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGP-PSAPPPPLPASSAPSVPNPG 1747
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 745 PPXPXPPXPPXXXXXXXPXXSXPPXPXPPXXXXRPXXSXPXXGXXPXP 888
PP P PP P S PP P P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 814 PXPXPPXXXXRPXXSXPXXGXXPXPPPXXPXXXLPPPXPXXXPPXP 951
P P P P P G P P P LP P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.97
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 810 PPPPXPPXXXPPAXPLXP 863
PPPP PP PP+ P P
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -2
Query: 953 GGXGGFXXGXGGGXXXXGXXG-GGXGXXPXXGXEXXGRXXXXGGXGXG 813
GG GGF G GG G GG G G R GG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 811 PPXPXPPXXXXRPXXSXPXXGXXPXPPPXXP 903
PP P P S P P PPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 21.8 bits (44), Expect(2) = 1.3
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Frame = +1
Query: 886 PPPXXPXXX--LPPPXPXXXPPXPPXS 960
PP P LP P P P PP S
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQS 250
>SPBC1347.08c |||ribonuclease H2 complex subunit|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 580 SKQRSAMIGDHL--NTYTIICXPICL 651
SKQRS +GDH+ + Y +C PI L
Sbjct: 48 SKQRSWFVGDHVVSDGYLYVCTPIDL 73
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 289 PKSPS-SFCPKVPKTLPPPICLSQVTS 212
P SP SF +VP +PPP+C V S
Sbjct: 165 PISPDYSFPLRVPINIPPPLCTPSVVS 191
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 GKVFGTLGQNDDGLFGKAGYNR-EIFNDDRGKLTGQAYGTRVLGPGGDSTNYG 398
GK G +G + D + +R F RG +Y TRV G GG T+YG
Sbjct: 166 GKFIG-VGSDGDSRISTSSKSRFPSFGSSRG-----SYRTRVYGDGGGFTDYG 212
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 810 PPPPX--PPXXXPPAXPLXPXXGXXXPPPP 893
PPPP P P P+ G PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 334 LPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLSQVTSRGCRLEGCPLIE 176
+P++ ++SL A + PSS P ++P S VTS L PL E
Sbjct: 1 MPKAKKRVSLASKASSRLPSSGKPSQQASIPNVELSSTVTSNSQVLNNDPLKE 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,942
Number of Sequences: 5004
Number of extensions: 72615
Number of successful extensions: 511
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 491307756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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