Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H23
         (960 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    26   0.58 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.77 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   4.1  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    23   4.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.4  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.8 bits (54), Expect = 0.58
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 300 YNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGGRLELGEQ 422
           Y + ++  D+  +TG AYG   + PG  S  + G  E G++
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAG-FEFGKE 97


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 75  IQLKMNSNLFYIFATTLVCVNAEVYGPFDYAEDYSIRGQPS 197
           I  ++   LF +FA T  C+N  VYG F+  +      +P+
Sbjct: 293 IDQRIQKGLF-LFACTNSCMNPIVYGAFNIRDRNKTSARPT 332


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 506 WIRXPLFCRWYGLEG 550
           W+  PLFC+ Y + G
Sbjct: 118 WVLGPLFCQIYAMLG 132


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 506 WIRXPLFCRWYGLEG 550
           W+  PLFC+ Y + G
Sbjct: 84  WVLGPLFCQIYAMLG 98


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 745 PPXPXPPXPP 774
           PP P PP PP
Sbjct: 338 PPKPAPPPPP 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,035
Number of Sequences: 438
Number of extensions: 8911
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)