Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H22
         (963 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   5.5  
07_01_0479 + 3606663-3607448                                           29   5.5  
01_01_0162 - 1394980-1395760,1396024-1396037                           29   7.3  
01_01_0159 + 1380421-1381143                                           29   7.3  
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713...    28   9.6  
04_01_0080 - 889548-889892                                             28   9.6  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
 Frame = +3

Query: 699  P*XTPPPPRXXAXXLIGAPSRXPXX*XPCXRXLRXXXXVSPPPXXXXPV--XPKNXGXTP 872
            P  TPPPP   +  L   P   P    P  +       + PPP    PV   P + G  P
Sbjct: 1165 PPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSSLGYQP 1224


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 748 GPXPAFPXXEXXAPGXFGXGXXFXPPPXRXXRLXPKXRGXPP 873
           G  PAFP      PG F  G    PPP    ++ P   G PP
Sbjct: 192 GVPPAFPGGPPPPPGPFMRG----PPPMGPPQVRPGMPGGPP 229


>01_01_0162 - 1394980-1395760,1396024-1396037
          Length = 264

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
 Frame = +1

Query: 157 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 294
           R+C   +H +LY     CP  A         HD   H   C    CFC  P
Sbjct: 33  RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 82


>01_01_0159 + 1380421-1381143
          Length = 240

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
 Frame = +1

Query: 157 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 294
           R+C   +H +LY     CP  A         HD   H   C    CFC  P
Sbjct: 9   RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 58


>10_03_0021 +
           7129786-7130117,7130227-7130347,7131048-7131136,
           7131375-7131459,7131609-7131771,7132861-7132937,
           7133016-7133160,7133236-7133537,7133615-7133720,
           7134781-7134935,7135556-7135712,7135799-7135891,
           7136232-7136359,7136439-7136696,7136855-7137145,
           7137235-7137318,7138335-7138468,7138557-7138784,
           7139778-7139958,7140021-7140108,7140268-7140434,
           7140750-7141012,7141117-7141120
          Length = 1216

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 194 ALKWPSRTVRIPKSTISLTTWAHATYHSASATGLMS-GTRKL 316
           A   P+  +RIP S I    W+   Y++ S +G M+ GT  L
Sbjct: 498 AFSLPNWILRIPYSFIEAVVWSCVVYYTVSVSGNMTVGTNIL 539


>04_01_0080 - 889548-889892
          Length = 114

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = -3

Query: 364 IDLHNFINIQIPVHICQFSC 305
           +D+H+++N+ + + +C+F C
Sbjct: 84  VDIHDYLNLALHMQLCRFGC 103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,251,709
Number of Sequences: 37544
Number of extensions: 414111
Number of successful extensions: 881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)